Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3358848	3358876	29	2 [1]	[0] 2	PP_2949	permease

TGATGTACTGAGCCTTGGCTTATCGAGGACTTACCGATGGAAAAATCAGCAACCGGGTGGATCAACGGTTTCATAGGCGTCGCCATTTTTGCGGGTTCGTTGCCGGCAACCCGAGTGGCAGTGGCCGACTTCGAACCGACGTTCCTCACCT  >  NC_002947/3358712‑3358862                                                                                                                                        |                tGATGTACTGAGCCTTGGCTTATCGAGGACTTACCGATGGAAAAATCAGCAACCGGGTGGATCAACGGTTTCATAGGCGTCGCCATTTTTGCGGGTTCGTTGCCGGCAACCCGAGTGGCAGTGGCCGACTTCGAAc                 <  2:270336/136‑1 (MQ=255)                tGGCTTATCGAGGACTTACCGATGGAAAAATCAGCAACCGGGTGGATCAACGGTTTCATAGGCGTCGCCATTTTTGCGGGTTCGTTGCCGGCAACCCGAGTGGCAGTGGCCGACTTCGAACCGACGTTCCTCACCt  >  1:257863/1‑136 (MQ=255)                                                                                                                                        |                TGATGTACTGAGCCTTGGCTTATCGAGGACTTACCGATGGAAAAATCAGCAACCGGGTGGATCAACGGTTTCATAGGCGTCGCCATTTTTGCGGGTTCGTTGCCGGCAACCCGAGTGGCAGTGGCCGACTTCGAACCGACGTTCCTCACCT  >  NC_002947/3358712‑3358862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑