Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5560590	5560606	17	2 [0]	[1] 2	PP_4887/PP_4888	hypothetical protein/methyl‑accepting chemotaxis transducer

TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCG  >  NC_002947/5560538‑5560589                                                    | tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTcgcg  <  1:409845/52‑1 (MQ=255) tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTcgcg  >  2:409845/1‑52 (MQ=255)                                                    | TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCG  >  NC_002947/5560538‑5560589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑