Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3311071	3311073	3	2 [1]	[0] 2	PP_2906	sensor histidine kinase

CTGCTCCAGGCCACGAACAGAAAGCTGTACAGCGCCAGCAGGCGGCTGGTA  >  NC_002947/3311074‑3311124 |                                                   ctgctCCAGGCCACGAACAGAAAGCTGTACAGCGCCAGCAGGCGGCTGGTa  <  1:290418/51‑1 (MQ=255) ctgctCCAGGCCACGAACAGAAAGCTGTACAGCGCCAGCAGGCGGCTGGTa  >  2:290418/1‑51 (MQ=255) |                                                   CTGCTCCAGGCCACGAACAGAAAGCTGTACAGCGCCAGCAGGCGGCTGGTA  >  NC_002947/3311074‑3311124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑