New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1975731364 (0.850)68 (0.180) 30/250 18.2 17.6% intergenic (+33/‑233) mtnA/PP_mr25 methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
?NC_002947 = 1975793 321 (0.870)intergenic (+95/‑171) mtnA/PP_mr25 methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 400 total aligned reads displayed.

CGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTGCGCAGA  >  NC_002947/1975645‑1975942
                                                                                                                                                    |                                                                                                                                                     
cgcCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGa                                                                                                                                                      <  2:5272700/150‑1 (MQ=255)
 gcCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAg                                                                                                                                                     <  1:6521385/150‑1 (MQ=255)
 gcCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAg                                                                                                                                                     <  1:5298691/150‑1 (MQ=255)
 gcCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAg                                                                                                                                                     >  2:2681980/1‑150 (MQ=255)
  cccGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGc                                                                                                                                                    <  2:891067/150‑1 (MQ=255)
   ccGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGcc                                                                                                                                                   >  2:5182733/1‑150 (MQ=255)
     ggATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCcg                                                                                                                                                 <  2:955273/150‑1 (MQ=255)
     ggATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCcg                                                                                                                                                 <  2:3391017/150‑1 (MQ=255)
      gATGGTGCCTGGGTGGCTCAGCTGGTTTGCCGGATGCGCCTGCACTGTTTTTGTATCGCCTCAGGGGCGTCTTCGCGGGCTTGCCCGCTCCCAGTGGTATTTCGCATGGCCTCTGGGCCGTGGTGTACGTGTGGGGGCGGGCGAGCCcgc                                                                                                                                                <  2:1014543/150‑1 (MQ=255)
         gctgcCACGCGGGCTCCGGTGGTTTGCGGAACGCGCCGGAAGGGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGaa                                                                                                                                             <  2:6312440/150‑1 (MQ=37)
          ctgcCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAag                                                                                                                                            <  2:1433874/150‑1 (MQ=255)
          ctaccAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAag                                                                                                                                            <  2:7207119/147‑1 (MQ=255)
           tgcCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAaga                                                                                                                                           >  2:5432524/1‑150 (MQ=255)
           tgcCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAaga                                                                                                                                           <  2:1304447/150‑1 (MQ=255)
           tgcCAAGCGGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAaga                                                                                                                                           <  2:6433189/150‑1 (MQ=255)
            gcCACGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTGGCCCGCTCCCACTGGGATATGGCATGGCCTTTGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAagag                                                                                                                                          <  1:7450244/150‑1 (MQ=255)
             ccAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCGTGCCCGCGCCCCCAGGGCGAACGCCTGGCCGAAGGGCCGGGGGGAACCCGTGGGGGCGGGCGAGCCCCCGCAGAgg                                                                                                                                         >  1:4296048/1‑150 (MQ=255)
              cAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGc                                                                                                                                        >  1:8036601/1‑150 (MQ=255)
                   tGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGAAATCGCATGGCCTAAGGGCCGGGGTGTACCTGTGGGGGCGGGCGAGCCCCCCAAGAGGCCGGTg                                                                                                                                   >  1:6227406/1‑150 (MQ=38)
                   tGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGACTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTGAGGGCCGGGGTGAACCGGTGGGGGCGGGCGAGCCCCCGAAGAGGCCGGTg                                                                                                                                   >  1:5457443/1‑150 (MQ=38)
                   tGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGACTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGCTATCGCATGGCCGTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTg                                                                                                                                   >  1:8798708/1‑150 (MQ=255)
                    ggCTCCGCGGGTTTGCCGCACGCGCCTGCACTGATTTTGTATCGCCGCACCGGCCTCTTCGCGGGCTTGCCCGCGCCCAGTGGGATATCGCTTGGCCTTAGGGCCGTGGTTAACCTGTGGGGGGGGGCGAGCCCGCGAAGAGGCCGGTGc                                                                                                                                  <  2:5042227/150‑1 (MQ=38)
                         aGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCa                                                                                                                             >  2:1882236/1‑150 (MQ=255)
                         aGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCGTCGCGGGCGTGCCCGCTCCCACCGGGCTATAGCAGGGCCGGAGGGCCGGGGGGAACCAGTGGGGGCGGGCGAGCCCCCGCCCAGGCCGGggcaggca                                                                                                                             >  1:6045821/1‑150 (MQ=255)
                          gCTGGTTTGCCGCAAGCGCCTGCACTTATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCCCCCACTGGGATATCGCATGGCCTTCGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCaa                                                                                                                            <  1:6436374/150‑1 (MQ=255)
                                 tGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCGTCGGGGGCTTGCCCGCTCCCCCTGGGGTATCGCATGTCCGTAGGGCCGGGGTGAACCGGGGGGGGGGGGCGGGCCCCCGGAGAGGCCGGTGGCGGCGAGACaaaa                                                                                                                     >  1:7336032/1‑150 (MQ=255)
                                     gCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCa                                                                                                                 <  2:7799243/150‑1 (MQ=255)
                                           gcCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTc                                                                                                           <  2:8036601/150‑1 (MQ=255)
                                            ccTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTACCACTGGGTTATCGCAAGGCCTTAGGGCCGTGGTGAACCTGGGGGGGCGGGCGAGCCCGCGCAGAGGCCGGTGCAGGCAATACCAGAACCAGGtttaa                                                                                                          >  2:84162/1‑148 (MQ=38)
                                             cTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACGGGTATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCaa                                                                                                         <  2:4319929/150‑1 (MQ=255)
                                                       tttGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTga                                                                                               <  1:9638765/150‑1 (MQ=255)
                                                             gcGCCTCCCCGGCCTCTGCGCGGGGTGGCCCGCTCCCCCGGGGATCTCGCCTGGCCTTCGGGCCGTGGTGACCCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCaa                                                                                         <  2:8184931/149‑1 (MQ=38)
                                                               gCCTCCCCGGCCTCTTCGCGGCCTTGCCCGCCCCCACGGGGATATCGCAGGGCATTCGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACt                                                                                       <  1:2304439/150‑1 (MQ=38)
                                                               gCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCGTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACt                                                                                       >  2:1104674/1‑150 (MQ=255)
                                                                    cccGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGTATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCAc                                                                                  <  2:1808287/149‑1 (MQ=255)
                                                                    aCCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTCGGGCCGTGGTGAACCGGTGGGGGGGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCAc                                                                                  <  1:7845434/150‑1 (MQ=255)
                                                                        gCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCAccaca                                                                              >  1:1959014/1‑147 (MQ=255)
                                                                           tctTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTccc                                                                           >  2:6086523/1‑150 (MQ=255)
                                                                           tctTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTccc                                                                           >  1:280415/1‑150 (MQ=255)
                                                                             ttCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAaga                                                                                                                                           <  1:8566562/84‑1 (MQ=255)
                                                                             ttCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCa                                                                         >  2:5644400/1‑150 (MQ=255)
                                                                               cgcgGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCAcc                                                                       <  2:2517267/150‑1 (MQ=255)
                                                                                    gCTTGCTCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGAGCATCTGCCGCCTGTCCCCACCGcccc                                                                  >  2:9072846/1‑150 (MQ=39)
                                                                                      ttGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACt                                                                                       <  2:3592928/127‑1 (MQ=255)
                                                                                      ttGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACt                                                                                       >  1:3592928/1‑127 (MQ=255)
                                                                                      ttGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCcg                                                                >  2:3981346/1‑150 (MQ=255)
                                                                                      ttGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCcg                                                                >  2:6856780/1‑150 (MQ=255)
                                                                                      ttGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCcg                                                                >  2:8975217/1‑150 (MQ=255)
                                                                                      ttGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCcg                                                                >  2:2854027/1‑150 (MQ=255)
                                                                                         cccGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCa                                                                                                                 <  1:490733/98‑1 (MQ=255)
                                                                                          ccGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGtt                                                            >  2:5989870/1‑150 (MQ=255)
                                                                                          ccGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGtt                                                            >  2:3803864/1‑150 (MQ=255)
                                                                                          ccGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGtt                                                            >  1:5807442/1‑150 (MQ=255)
                                                                                          ccGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCAAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGtt                                                            >  2:7585408/1‑150 (MQ=255)
                                                                                           cGCTCACACTGGGATTTCGCTTGGCCTTAGGGCCGTTGTGAACCTGTGTGGGCGGGCGTGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGTCTGAGACCAACTTCCACCTCTCCCCACCGCCCCCGCGttt                                                           <  2:6227406/150‑1 (MQ=255)
                                                                                             cccccAGTGGGATAGCGCTTGGCTTTGGGGCGGTGGTCAACGGGGGGGGGGGGGCGCGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTtgt                                                         <  1:6736575/148‑1 (MQ=255)
                                                                                               ccccCTGGGATATCGCTTGGCCTTTGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGa                                                       <  1:8880809/150‑1 (MQ=255)
                                                                                               cccACTGGGATATCGCATGGCCTTCGGGCCGTGGTTAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGa                                                       <  2:4148979/150‑1 (MQ=255)
                                                                                               cccACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGa                                                       <  2:6956106/150‑1 (MQ=255)
                                                                                                ccACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGAt                                                      >  2:2081644/1‑150 (MQ=255)
                                                                                                 cACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATa                                                     >  2:5809364/1‑150 (MQ=255)
                                                                                                  aCTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATaa                                                    >  1:8362561/1‑150 (MQ=255)
                                                                                                  aCTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATaa                                                    >  1:1462195/1‑150 (MQ=255)
                                                                                                  aCTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATaa                                                    >  1:6979808/1‑150 (MQ=255)
                                                                                                       gATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCAc                                                                                  <  2:8512623/115‑1 (MQ=255)
                                                                                                        atatCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCg                                              >  1:2579049/1‑150 (MQ=255)
                                                                                                             gCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGt                                         >  1:5026773/1‑150 (MQ=255)
                                                                                                               aTGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGttt                                       >  1:7567265/1‑150 (MQ=255)
                                                                                                                 ggCCTTCGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTcc                                     <  1:4000926/150‑1 (MQ=255)
                                                                                                                 ggCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTcc                                     >  2:6677240/1‑150 (MQ=255)
                                                                                                                   ccTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCaa                                   >  1:4672399/1‑150 (MQ=255)
                                                                                                                   ccTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCaa                                   <  2:8851571/150‑1 (MQ=255)
                                                                                                                    cTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATa                                                                                                                          >  1:958311/1‑62 (MQ=255)
                                                                                                                    cTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAg                                  >  1:7958070/1‑150 (MQ=255)
                                                                                                                     ttAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGa                                 <  2:5531846/150‑1 (MQ=255)
                                                                                                                      tAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGa                                                       <  1:2199990/127‑1 (MQ=255)
                                                                                                                      tAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGa                                                       >  2:7123806/1‑127 (MQ=255)
                                                                                                                      tAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGa                                                       >  2:2199990/1‑127 (MQ=255)
                                                                                                                        gggCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCg                              <  2:1574045/150‑1 (MQ=255)
                                                                                                                          gCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGcc                            >  2:8586933/1‑150 (MQ=255)
                                                                                                                             gtggtgAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCAt                         >  1:1046961/1‑150 (MQ=255)
                                                                                                                              tggtgAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATc                        <  1:9164929/150‑1 (MQ=255)
                                                                                                                                gtgAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCAc                      >  2:4702258/1‑150 (MQ=255)
                                                                                                                                  gAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCAcgg                    >  2:7463769/1‑150 (MQ=255)
                                                                                                                                   aaCCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCAcggc                   >  1:8271931/1‑150 (MQ=255)
                                                                                                                                      cTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACggcggc                >  2:7299252/1‑150 (MQ=255)
                                                                                                                                       tgtgGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGcc               >  1:3774326/1‑150 (MQ=255)
                                                                                                                                         tgGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCtt             >  1:3030967/1‑150 (MQ=255)
                                                                                                                                         tcttcgcgggctCGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACAAGGTTTCAAGCGCGGCTGAGACAAACTGCCACATCTCCCCACCCCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCtt             >  1:1336454/6‑150 (MQ=255)
                                                                                                                                          gggggCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTc            >  1:9312913/1‑150 (MQ=255)
                                                                                                                                           ggggCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCa           >  1:7696314/1‑150 (MQ=255)
                                                                                                                                            tcgcgggctCGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCAt          >  2:650208/3‑150 (MQ=255)
                                                                                                                                             ggcgggcgAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCAtt         <  2:2266259/150‑1 (MQ=255)
                                                                                                                                              gcgggcgAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTg        <  1:3378928/150‑1 (MQ=255)
                                                                                                                                              cgcggcgAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTg        <  2:2874477/147‑1 (MQ=255)
                                                                                                                                                gggcgAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTgcg      >  2:7902362/1‑150 (MQ=255)
                                                                                                                                                gggcgAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTgcg      >  1:1683947/1‑150 (MQ=255)
                                                                                                                                                  gcgAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTGCGCa    <  2:9288210/150‑1 (MQ=255)
                                                                                                                                                  gcgAGCCCGAGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTGCGCa    >  2:3106529/1‑150 (MQ=255)
                                                                                                                                                    gAGCCCGCTAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTGCGCAGa  <  1:8625698/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATTGCGCAGA  >  NC_002947/1975645‑1975942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.