BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,345,069	0	G	C	43.2%	156.5 / 244.8	176	intergenic (+61/‑270)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
Reads supporting (aligned to +/- strand): ref base G (39/61); new base C (39/37); total (78/98)
Fisher's exact test for biased strand distribution p-value = 1.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.89e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 189 total aligned reads displayed.

TGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGC  >  NC_002947/4344920‑4345217

tGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAg                                                                                                                                                       <  2:6990641/150‑1 (MQ=255)

 ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  1:9451021/150‑1 (MQ=255)

 ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  2:6919678/150‑1 (MQ=255)

 ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  2:6704377/150‑1 (MQ=255)

 ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  1:6640417/150‑1 (MQ=255)

     ccgccgCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGa                                                                                                                                                  <  2:5355388/150‑1 (MQ=255)

      cgccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGac                                                                                                                                                 <  1:709319/150‑1 (MQ=255)

      cgccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGac                                                                                                                                                 <  2:2461723/150‑1 (MQ=255)

       gccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGaca                                                                                                                                                >  1:4905426/1‑150 (MQ=255)

       gccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGaca                                                                                                                                                <  2:1368331/150‑1 (MQ=255)

         cgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcacc                                                                                                                                              <  2:4905426/150‑1 (MQ=255)

           cTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                            <  2:8932619/150‑1 (MQ=255)

              aaaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGa                                                                                                                                         <  2:5660121/150‑1 (MQ=255)

               aaTACGCGGGGCTTGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGACTGCGAGGGTGTCCCCACCggc                                                                                                                                        >  2:6266996/1‑148 (MQ=255)

               aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                        <  2:5309466/150‑1 (MQ=255)

               aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                        <  1:8874759/150‑1 (MQ=255)

                 tACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGc                                                                                                                                      <  2:1798899/150‑1 (MQ=255)

                    gcgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt                                                                                                                                   <  1:8485532/150‑1 (MQ=255)

                       gggCTGGCGGGCTATGGGCTGGTGGTTGTGCAGTGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcg‑c                                                                                                                               <  2:8855628/150‑1 (MQ=255)

                       gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcg‑c                                                                                                                               <  2:4554941/150‑1 (MQ=25)

                       gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcg‑c                                                                                                                               <  1:5777528/150‑1 (MQ=25)

                       gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcg‑c                                                                                                                               <  2:3003012/150‑1 (MQ=25)

                       gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcg‑c                                                                                                                               <  1:4813486/150‑1 (MQ=255)

                       gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcg‑c                                                                                                                               <  1:4507434/150‑1 (MQ=255)

                        ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcg‑cg                                                                                                                              <  2:4955184/150‑1 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACCAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  2:1833203/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGGGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑Cgg                                                                                                                             <  1:2738713/150‑1 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  2:7797216/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  1:8319972/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  1:2242068/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  1:2513945/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  1:3092059/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  1:3822889/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  2:1465387/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  1:5063695/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  2:8599631/150‑1 (MQ=25)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTc                                                                                                                                  >  2:393084/1‑146 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑Cgg                                                                                                                             <  2:1965205/150‑1 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑Cgg                                                                                                                             <  1:1642730/150‑1 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑Cgg                                                                                                                             <  1:8752811/150‑1 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑Cgg                                                                                                                             <  1:477287/150‑1 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑Cgg                                                                                                                             <  2:7542835/150‑1 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑Cgg                                                                                                                             <  1:588594/150‑1 (MQ=255)

                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGGTCGACCCGGGGATGGATGGCTGAGAACACCCACGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             <  2:8599652/150‑1 (MQ=21)

                         gCTGGCGGGCTATGAGCTGGACGTCGTGCACAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAACCAATTCATTTAGCGGGGCCCTGTAGGAGCTGGTTTACCCGCGAAAGCGAGGGTGACACCACCGACGCATTcg‑cgt                                                                                                                             <  2:5000624/150‑2 (MQ=255)

                              cGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTaaa                                                                                                                        <  1:7227069/150‑1 (MQ=255)

                               gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAAc                                                                                                                       <  1:5615723/150‑1 (MQ=25)

                               gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAAc                                                                                                                       <  1:4204764/150‑1 (MQ=21)

                                ggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAAcc                                                                                                                      <  2:2741430/150‑1 (MQ=25)

                                ggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAAcc                                                                                                                      <  1:1859808/150‑1 (MQ=25)

                                   tttgtgCTGGAGGTGGTGCAGAGCATCCCGTTCGACCGGGGGTTGGATGGCTGACAAAACACAAGCATTTTATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCTAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGc                                                                                                                   <  1:3581694/145‑1 (MQ=37)

                                   tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑Cgg                                                                                                                             >  1:6734206/1‑140 (MQ=25)

                                                                       ccGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcg‑c                                                                                                                               <  1:8202936/102‑1 (MQ=17)

                                                                         ggggATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTAGCCGCCCAAGGGAGGGGGTCCCCACCCCCGCCGTCG‑CGGGGGCAACCCCCCCGAAACGGCCCGTGGGGCTTGTGGACGGGCGGAGTg                                                                             >  2:2816525/1‑150 (MQ=255)

                                                                                 atggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCGGTAGGAGCGGGTTTACCCGCGACTGCGAGGGTGACACCACCGACGCATTcg‑c                                                                                                                               <  1:9596067/92‑1 (MQ=255)

                                                                                 atggCTGAGAACACACAAGCAATTGATGTAGCGGGGCCCTGTAGGAGCGGGTTTTACCCCCAAAGCCAGGGTGGAACCACCCCCCCAATCC‑CGGGGAAACCCCCGCCAAAAAGGCCCCTGGTGGTGTTTAGACGGGGGGGTGGTGGGCgg                                                                     >  2:5931201/1‑150 (MQ=255)

                                                                                            cacacaAGCATTTTTTTTCGGGGGGCCTTGTTGGAGGGTTTTTACCCGCTATTGCGTGTGTTAAACAACCCCCTATTTCG‑CGGTTAACCCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATAc                                                          <  2:6715894/150‑1 (MQ=255)

                                                                                                 aaGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGGTTTTCCCCGCAAGCGGGGGGGGCCCCACCCCCCCCATCGCCGGGGAAACCC‑CGCCCACCCGGCCCGGGGTGCGTTTGTCCCGGCGGCGGGATGGGCGGTCGCCCCAAAccccct                                                     >  2:6074853/1‑146 (MQ=255)

                                                                                                                               gCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTCAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGata                       >  2:9651212/1‑150 (MQ=255)

                                                                                                                               gCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGata                       >  1:9234919/1‑150 (MQ=255)

                                                                                                                               gCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGata                       >  2:3685100/1‑150 (MQ=255)

                                                                                                                                   gTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGATAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                   >  1:1791959/1‑150 (MQ=21)

                                                                                                                                   gTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCt                                           >  1:5405933/1‑126 (MQ=18)

                                                                                                                                   gTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATCCCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                   >  1:4113429/1‑150 (MQ=255)

                                                                                                                                    tttACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCCTGGTGCTTTTGACAGGGCGGa                                                                                >  1:6136790/1‑88 (MQ=255)

                                                                                                                                     ttACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAAc                                                                                                                       >  2:4682594/1‑48 (MQ=255)

                                                                                                                                     ttACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAAc                                                                                                                       <  1:4682594/48‑1 (MQ=255)

                                                                                                                                         cggcgATTGGGTGGTTGACACACCAGACGCATTCG‑CGGTTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             <  1:7859596/148‑1 (MQ=255)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCg                                                                      <  2:9704855/93‑1 (MQ=14)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCg                                                                      >  1:9704855/1‑93 (MQ=14)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                         >  2:9573103/1‑122 (MQ=21)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:3823559/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:8188075/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:5245232/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:7680822/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:6578206/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:6650981/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:5438459/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:5232320/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:4918155/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTGGCCAAAATCTTGGAAGACCATAATATGATATCCCGTAGAc             >  2:3245648/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCGTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:1165138/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:7902486/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:5686789/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:4486488/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:1258867/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:5127745/1‑150 (MQ=255)

                                                                                                                                         acgcgAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCAATACCTCTTGCCAAAATATTGGAAAAACATAATATGATATCCCGTAGAc             >  1:1878100/2‑150 (MQ=21)

                                                                                                                                          cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc            >  1:760979/1‑150 (MQ=25)

                                                                                                                                          cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc            >  2:9272802/1‑150 (MQ=25)

                                                                                                                                          cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc            >  2:8287709/1‑150 (MQ=25)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  2:8269212/1‑150 (MQ=25)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  2:7038389/1‑150 (MQ=25)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  1:5447590/1‑150 (MQ=25)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  2:3773744/1‑150 (MQ=25)

                                                                                                                                           gcgAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  2:6234349/1‑150 (MQ=255)

                                                                                                                                                tGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt      >  2:4364529/1‑150 (MQ=255)

                                                                                                                                                tGCGAGGGTGACACCACCGACACATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt      >  2:2282149/1‑150 (MQ=255)

                                                                                                                                                  cGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCt    >  1:940288/1‑150 (MQ=255)

                                                                                                                                                   gAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATg                          <  2:5445470/127‑1 (MQ=255)

TGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCG‑CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGC  >  NC_002947/4344920‑4345217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`