| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,534,031 | Δ1 bp | 5.1% | intergenic (+166/‑241) | PP_2217 → / → PP_2218 | enoyl‑CoA hydratase/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,534,031 | 0 | G | . | 5.1% | 715.0 / 34.8 | 234 | intergenic (+166/‑241) | PP_2217/PP_2218 | enoyl‑CoA hydratase/transposase |
| Reads supporting (aligned to +/- strand): ref base G (127/94); new base . (10/2); total (137/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 240 total aligned reads displayed.
GCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTT > NC_002947/2533882‑2534180 | gccgttgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTg > 1:727911/1‑150 (MQ=255)gccgttgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTg < 1:6312309/150‑1 (MQ=255) ccgttgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGc > 2:2405473/1‑150 (MQ=255) gttgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAg > 1:5594438/1‑150 (MQ=255) ttgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgc < 2:4102067/150‑1 (MQ=255) tgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgcg > 1:5700465/1‑150 (MQ=255) gccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgcgc < 2:2136681/150‑1 (MQ=255) gccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTc < 2:1421585/150‑1 (MQ=255) ccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTcc < 1:3684200/150‑1 (MQ=40) cgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTccc < 1:5473075/150‑1 (MQ=40) tGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCgg < 2:2914436/150‑1 (MQ=38) gCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGa < 2:2363840/150‑1 (MQ=37) gCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGa < 2:6257013/150‑1 (MQ=37) cTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAg > 2:5721132/1‑150 (MQ=37) ttttGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGc > 1:6074041/1‑150 (MQ=35) ttttGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGc > 2:1210138/1‑150 (MQ=35) ttGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCaa < 2:4556214/150‑1 (MQ=34) gcgtctcAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGCGGCCGAGCGTAGGGCTTGCGGAGGGAGGGGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAgt < 2:5889808/147‑2 (MQ=255) gCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGa > 1:2816552/1‑150 (MQ=35) ttCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGAcc > 2:339934/1‑150 (MQ=37) ttCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGAcc > 2:4206506/1‑150 (MQ=37) ttCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGAcc > 2:298692/1‑150 (MQ=37) ttCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGAcc > 1:3777621/1‑150 (MQ=37) ttCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGAcc < 2:5926301/150‑1 (MQ=37) tGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGa > 2:4712612/1‑150 (MQ=38) tGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGa > 1:5058815/1‑150 (MQ=38) gcgcGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAg < 1:339934/150‑1 (MQ=37) gcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAggg < 2:2756159/150‑1 (MQ=37) gATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGac > 1:3254224/1‑149 (MQ=37) tAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAAcc > 1:3903778/1‑150 (MQ=37) aGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGACCCCCGGAg > 1:4317914/1‑150 (MQ=37) gCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCg > 2:385050/1‑150 (MQ=37) gACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGTGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTa < 2:1906853/150‑1 (MQ=37) gACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTa < 2:3671589/150‑1 (MQ=37) gACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTa < 2:6638456/150‑1 (MQ=37) gACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTa < 2:2110555/150‑1 (MQ=37) gCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAgcg > 2:3907798/1‑150 (MQ=37) aTTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAgg < 2:930568/150‑1 (MQ=37) ttGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAggg < 2:1571351/150‑1 (MQ=37) aggaggCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgatgat > 2:531899/1‑150 (MQ=37) ggaggCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGatgatg > 1:181862/1‑150 (MQ=37) gaggCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATgg > 1:3996840/1‑150 (MQ=37) gatcGTAGGGGTTGCTGTGGTTGTTGACGGGCATGGATGCCCTTCACGCGATG‑AGGCCCCATGTATGGGGCCTGCTGCGCTTACTCCGGGGAGAATGACCGTTGCTTTTGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCa < 2:1305425/147‑1 (MQ=2) gAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCa < 2:2251900/150‑1 (MQ=37) gAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCa > 2:6690639/1‑150 (MQ=37) gCGTCGGGCGTGCGGTGGGCGGTGCGGGGCATGGCGGCCCGTCACGCGCTG‑CGGCCCCAGGGCGGGGGCCTGCAGCGCTTACGCCCGGTAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGc < 1:6430446/150‑1 (MQ=11) gTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGt > 1:3064436/1‑150 (MQ=35) tAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGAGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGtt > 1:1341287/1‑150 (MQ=25) gggCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCCTGGATGGGGCCTGCAGCGCGTACGCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGtttt < 2:354746/150‑1 (MQ=21) gCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGtttttt > 1:2486081/1‑150 (MQ=34) gttGCGGTGGGAGGTGCCGGGCATGGATGCCCGTCAAGCGCTG‑CGGCCCCTTGGATGGGGCCTGCAGCGCGTCCTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTg < 1:1020734/149‑1 (MQ=11) tGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGt < 2:3442747/150‑1 (MQ=34) gagggaggTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACt < 2:1494648/150‑1 (MQ=32) gggaggTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACttt < 2:5205354/150‑1 (MQ=32) cGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGt < 1:3846491/150‑1 (MQ=32) gggCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGtt > 2:5743660/1‑150 (MQ=32) gggCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGtt > 2:5515408/1‑150 (MQ=17) gCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTg > 2:3954037/1‑150 (MQ=32) cATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGTAGCAACACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGa < 2:1781123/150‑1 (MQ=17) tGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACa > 1:2534839/1‑150 (MQ=32) gATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGGTTGACaaa > 1:2285767/1‑150 (MQ=17) aTGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaa > 1:949109/1‑150 (MQ=32) tGCCCGTCACGCGCTG‑CGGCCCCTTGGTGGGGGCCTGCTGCGCGTACTCCCGGGAGCAAGACCTTAGCGAGGCAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa < 1:5390821/150‑1 (MQ=11) tGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa < 2:1048572/150‑1 (MQ=32) tGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa > 1:2767481/1‑150 (MQ=32) gCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAg > 1:1249247/1‑150 (MQ=32) ccGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAtgtg > 2:3068003/1‑150 (MQ=17) ccGTCAAGCGCTG‑AGGCCCCAGGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTg > 2:6785498/1‑150 (MQ=17) cGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGAAAGCCCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGa < 1:6535927/150‑1 (MQ=17) gcgcTGCAGGCCCCATCCATGGGGCCT‑CAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgcc > 1:3438149/1‑150 (MQ=11) cgcTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgccg > 1:1850066/1‑150 (MQ=32) gctgcaGGCCCCATCCATGGGGCCT‑CAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGt > 2:971147/6‑150 (MQ=11) gcTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGt < 2:5019905/150‑1 (MQ=32) tgcaGGCCCCATCCATGGGGCCT‑CAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTaa > 1:4474816/4‑150 (MQ=255) tG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTaa > 2:793898/1‑150 (MQ=32) caGGCCCCATCCATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAg > 1:6262181/2‑150 (MQ=17) aGGCCCCATCCATGGGGCCT‑CAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAggg > 2:4396651/1‑150 (MQ=12) gCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGc > 1:2331869/1‑150 (MQ=32) ccccATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGcc < 2:5700465/150‑1 (MQ=32) ccccAGGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGcc < 2:2638527/150‑1 (MQ=17) cccATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCa > 1:4618068/1‑150 (MQ=33) cccATCCATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCa > 1:6030439/1‑150 (MQ=18) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 1:649768/1‑150 (MQ=34) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 2:4598828/1‑150 (MQ=34) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 1:2500645/1‑150 (MQ=34) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 2:6607979/1‑150 (MQ=34) cATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATc < 2:1959153/150‑1 (MQ=35) atggatggGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATcc > 2:2546354/1‑150 (MQ=35) ggatggGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCt > 1:4088834/1‑150 (MQ=38) ccatggGGCCT‑CAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCtt > 1:6353510/3‑150 (MQ=255) gatggGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCtt < 2:5446470/150‑1 (MQ=38) gatggGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCtt > 1:4847494/1‑150 (MQ=38) gatggGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCtt < 2:3099389/150‑1 (MQ=38) tggGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTc < 2:570213/150‑1 (MQ=40) gggggCCTGCAGCGCGTACTCCGGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTc < 1:5265461/149‑1 (MQ=255) ggCCTGCAGCGCGTACTCCCGGGAGCACGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAg < 2:4464169/150‑1 (MQ=255) ggCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAg < 2:6074041/150‑1 (MQ=40) gCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGGAGCGCAGGGGCCGGATGATGGGAGCCAGCGATTTTTGGTTACTTTTTGACGCGTTTGACAAAAAGTGACCCGCCGTACGGGCCATCCCTGTCAAgg > 1:3190801/1‑150 (MQ=14) gCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCtt > 2:3212812/1‑150 (MQ=40) gCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCtt > 2:2070387/1‑150 (MQ=40) | GCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTT > NC_002947/2533882‑2534180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |