| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,377,809:1 | +A | 7.7% | intergenic (+267/+25) | PP_2970 → / ← PP_2971 | hypothetical protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,377,809 | 1 | . | A | 7.7% | 1102.5 / 87.1 | 272 | intergenic (+267/+25) | PP_2970/PP_2971 | hypothetical protein/transposase |
| Reads supporting (aligned to +/- strand): ref base . (145/106); new base A (6/15); total (151/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.17e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.42e-01 | |||||||||||
Only 100 of 294 total aligned reads displayed.
TGTTGTTTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGCCCA > NC_002947/3377660‑3377958 | tgttgtTTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg > 2:6860012/1‑150 (MQ=255) gttgttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑c < 1:3696492/150‑1 (MQ=255) gttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cggc < 2:541337/150‑1 (MQ=255) ttATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGa < 2:3453181/150‑1 (MQ=255) tGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTc < 2:1335114/150‑1 (MQ=255) gggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCg > 2:5770926/1‑150 (MQ=255) ggCACCTCGAATAACGCGAGGTTTTCAGTGCCTCCGACCGCCAAATGAAGGCCATGATCGACTCCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCgg < 2:3582181/150‑1 (MQ=255) ggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCgg < 1:6623299/150‑1 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCTGAATCG‑CCGCTGCAGAGGGCGATTCgga < 1:1307681/150‑2 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGc < 1:1716877/150‑1 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTCgga < 1:2702458/150‑2 (MQ=255) cACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTCggaa < 1:1740328/150‑3 (MQ=255) cACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTCggaa < 2:6819408/150‑3 (MQ=255) cACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTCggaa < 1:3071802/150‑3 (MQ=255) cACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTGCCGAATCG‑CCGCTGCAGAGGGCGATTCggaa < 1:5225867/150‑3 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc > 2:2490418/1‑150 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc > 1:2492351/1‑150 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc > 2:5096920/1‑150 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc > 2:6003745/1‑150 (MQ=255) cTCGAATAACGCGAGGTTGTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGAGTCGGCCCAc > 1:5863542/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 1:2796822/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 1:5095220/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCACCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTCggaa > 1:1874083/1‑144 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCACCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTCggaa < 2:1874083/146‑3 (MQ=255) gAATAACGCGTGGTTTTCAGTTAATCCGACCGCAAAATATTGGCCTTGATCGAATTGGGTTCTTTTTCTGGGGCTAATCACCGCTTTCTGGGGGGTGTCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCTG‑CGGCGATTCGGCCCACTcc < 2:3847319/150‑1 (MQ=255) gAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAg > 1:2463358/1‑150 (MQ=255) gAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAg > 2:2392980/1‑150 (MQ=255) gTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGTTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAg < 2:1118105/150‑1 (MQ=255) aTCCGCCCGCCAATTGATGGCCATGACCGAATTCGGTTCGTTTTCTGCGGCGAACCCCCGCTTTCTGGGCGGTGTCGCCCCTTTTTCCTCCCGAATCGCCCTGTGCAG‑GGGCTTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTcc < 2:2309713/150‑1 (MQ=255) tCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTccc > 1:5675997/1‑150 (MQ=255) ccGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCg > 2:4049848/1‑150 (MQ=255) cGACCGCCAATTGTGGGCCTTGATCGATTGGGGTTCGTTTTGTGGGGCGAATCACGGGTTTGTGGGGGTTGTCGCCCGTTTTTTCTCCCGACTCGCCCTCGGCAG‑GGGGTTTTGGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGc < 1:6181231/150‑1 (MQ=255) cGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGc > 2:899316/1‑150 (MQ=255) gACCCCCAAATGTTGCCCTTTATCTATTTCTGGTCGTTTTCTGCGGCTAATCACCGCTTTCTGGGGGGTGTCGCCCCGTTTTTCTTCCCAATCGCCCCCCGCAC‑CGGCCATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGcc < 1:6689810/150‑1 (MQ=255) ccGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCTAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCtt < 2:2813007/150‑1 (MQ=255) ccaaaaTGTGGGCCATGAGCGATTGCGGTTCGATTTCGGGGGCGAATCACCGCTTTCTGGGCGGTGCCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCAG‑GGGCTATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCt < 2:6537059/147‑1 (MQ=255) ccAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTg > 1:6373645/1‑150 (MQ=255) aaaTGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGa > 2:4742892/1‑150 (MQ=255) gatgGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGGGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTa < 2:1575850/150‑1 (MQ=255) ggCCATGATCGAATTCGGTTCGTTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTacac < 2:2236589/150‑1 (MQ=255) ggCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTacac > 1:748345/1‑150 (MQ=255) gCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACAcc > 1:3529002/1‑150 (MQ=255) gCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACAcc > 2:6655447/1‑150 (MQ=255) ccATTATCGAATTCGGTTCGTTTTCTGCGGCGAATCACGTCTTTGTGGGCGGTGTCGCCGCTTTTTTCTTCCTACTCGCCCTCGGCAG‑GGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCa < 2:5555413/150‑1 (MQ=255) ccATGAGCGTAGCCGGTTCGATTGCGGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCCG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCa < 2:1540780/150‑1 (MQ=255) aTGATCTAATTGGGTTCGTTTTCTGCGGCTAATCACCGGTTTGGGGGGGGTGTCGCCCCGTTTTTGTTCCGAATCGCCCTCTGCAG‑CGGCTATTGGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGc < 2:4188022/150‑1 (MQ=255) ctCGATTTCGGTTCGTTTTGTGCGGCGAACCCCCGCTTGCGGGGGGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCGGCTG‑GGGCGATTGGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGc < 2:3645249/149‑1 (MQ=255) gAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTc > 1:4298880/1‑150 (MQ=255) tttgggTTCTTTTTCTGGGGCTAAACCCCGCTTTCTGGGGGTTGGCGCCCCTTTTTTCTCCCCAATCGCCCTCTGCCG‑CGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCaa < 1:983306/146‑1 (MQ=255) ggTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTg > 2:3373259/1‑150 (MQ=255) ggTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTg > 2:3199580/1‑150 (MQ=255) ggtctttttGTGCGGCGACCCCCCGCTGTGGGGGGGGTGGCGCCCGTTTTTCCTCCCGAACCGCCCTCGGCCG‑GGGCGTTCCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGt < 1:3113279/144‑1 (MQ=255) ttCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTa > 1:4671937/1‑150 (MQ=255) ttCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTa > 2:2052227/1‑150 (MQ=255) gATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCa > 2:5654404/1‑150 (MQ=255) aTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAg > 1:5949224/1‑150 (MQ=255) tgggcggctAATCCCGGTTTTGTGGGGGGTGGCGCCCGTTTTTTCTCCCTAATCGCCCTCGGCCG‑GGGCTATCCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGACGCTTCAAGTTGTAGCAGgcc < 1:6542182/147‑1 (MQ=255) gcgACTCACCGCTTGCGGGGCGGGGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCcatc < 2:2669726/150‑1 (MQ=255) cgAACCACCGCTTACTGGGCGGTGTCGCCCCGATTTTCTTCCGAATCGCCCCCTGCAG‑CGGCGATACGGCCCACTCCGGGCGTCAGAAGGCCTAGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCcatca < 2:2128171/150‑1 (MQ=255) tCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgt > 1:4444065/1‑150 (MQ=255) tCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgt > 1:2059396/1‑150 (MQ=255) cACCGCTTTCTGGGCGGTGTCTCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCATGATTCCCGCCTTCAGGAAGTACACCAGCCGCTACAAGTTGTAGCAGGCCGCCAtcatcgtc > 2:3666090/1‑150 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCcatc < 2:4088743/142‑1 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCcatc > 1:4088743/1‑142 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcat > 2:4619872/1‑150 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcat > 2:6760926/1‑150 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcat > 1:3923939/1‑150 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcat > 1:3023978/1‑150 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcat > 1:1402833/1‑150 (MQ=255) cGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcatc > 1:1113179/1‑150 (MQ=255) cGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcatc > 1:4030695/1‑150 (MQ=255) tggggggggTGTCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCCG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCaaa < 2:1764549/147‑1 (MQ=255) tggggggggTGGCGCCCTTTTTTTCTTCCCACTCGCCCCGTGCCG‑GGGCTTTTCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCaaa < 1:2392980/147‑1 (MQ=255) tGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGt > 2:3329962/1‑150 (MQ=255) ggCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTc > 2:498532/1‑150 (MQ=255) gggTGTCGCCCCTTTTTTCTTCCTAATCGCCCTCTGCCG‑CGGCTTTTGGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTcgc < 1:2219125/149‑1 (MQ=255) gggTGTCGCCCCGTTTTTCGCCCCAACCGCCCTCTGCCG‑CGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTcgc < 1:3244335/149‑1 (MQ=255) cGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGccc < 2:4936478/150‑1 (MQ=255) gCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGcccc > 2:4373732/1‑150 (MQ=255) ccccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCt > 2:1951866/1‑150 (MQ=255) cccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTg > 1:1052920/1‑150 (MQ=255) tttaCTTCCGAAACGCCCTCTGCTG‑GGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGa < 1:4569074/150‑1 (MQ=255) cttcCGACTCGCCCTCTGCAG‑GGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGt < 2:1405926/150‑1 (MQ=255) ttcCTAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTa < 2:6230263/150‑1 (MQ=255) ttcCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTa > 2:2946416/1‑150 (MQ=255) ttcCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATAGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTa > 1:3337294/1‑150 (MQ=255) ccGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACg > 2:696152/1‑150 (MQ=255) cGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACgg > 2:5280371/1‑150 (MQ=255) cGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACgg > 2:6219996/1‑150 (MQ=255) cGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGGTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACgg > 2:5138198/1‑150 (MQ=255) cGAATCG‑CCGCTGCAGAGGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACgg > 2:2717172/1‑150 (MQ=255) aaTCGCCCTCTGCAG‑CGGGTATTCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGAt < 1:6003745/150‑1 (MQ=255) cGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCaa < 1:498532/150‑1 (MQ=255) cccTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGAttcact < 2:4850375/150‑6 (MQ=255) cccTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACt > 1:5809625/1‑150 (MQ=255) ccTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACtt < 2:5863542/150‑1 (MQ=255) ctctGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTg > 2:3093298/1‑150 (MQ=255) tctGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTgc > 2:4303905/1‑150 (MQ=255) tGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTgccg > 2:5309983/1‑150 (MQ=255) gCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTgccgc < 2:3529002/150‑1 (MQ=255) | TGTTGTTTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGCCCA > NC_002947/3377660‑3377958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |