| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,421,080:1 | +G | 5.2% | intergenic (+29/+90) | PP_3901 → / ← PP_3902 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,421,080 | 1 | . | G | 5.2% | 1889.7 / 87.6 | 423 | intergenic (+29/+90) | PP_3901/PP_3902 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (150/251); new base G (7/15); total (157/266) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 433 total aligned reads displayed.
GGAATCCCAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGAAAGTCGCCA > NC_002947/4420931‑4421229 | ggAATCCCAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGa < 2:1116957/150‑1 (MQ=255)ggAATCCCAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGa > 1:2491518/1‑150 (MQ=255) gAATCCCAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑g > 2:6050520/1‑150 (MQ=255) ccAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGc > 1:5690897/1‑150 (MQ=255) cAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCt > 1:6293623/1‑150 (MQ=255) aaGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCG‑CTCGAGGCGGGcaaggt < 1:3920083/150‑6 (MQ=255) aaGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCG‑CTCGAGGCGGGcaaggt < 2:2350057/150‑6 (MQ=255) aaGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCG‑CTCGAGGCGGGcaaggt < 1:2388759/150‑6 (MQ=255) aGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCtttttt < 2:5433398/150‑1 (MQ=255) aGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCG‑CTCGAGGCGGGcaaggtg < 1:96130/150‑7 (MQ=255) gACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCttttttt < 2:3367231/150‑1 (MQ=255) gACTGGGGCGCGATCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCttttttt < 1:3210468/150‑1 (MQ=255) gcgcTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAg > 2:3375977/1‑150 (MQ=255) gcgcTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAg > 1:4393812/1‑150 (MQ=255) cgcTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGa > 2:5349516/1‑150 (MQ=255) tcgtcgAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGaaaa < 1:3685600/150‑1 (MQ=255) tcgtcgAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGaaaa < 1:3567330/150‑1 (MQ=255) gCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTa > 2:3611142/1‑150 (MQ=255) ccATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTAt < 1:3782055/150‑1 (MQ=255) cATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATg < 2:205000/150‑1 (MQ=255) cATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATg < 1:1011903/150‑1 (MQ=255) aTGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATgg < 1:5828806/150‑1 (MQ=255) aTGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATgg < 1:5245632/150‑1 (MQ=255) gCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTaccac > 2:4087536/1‑150 (MQ=255) cACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTaccacc < 2:4371519/150‑1 (MQ=255) aCCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTAccacca > 2:4807284/1‑150 (MQ=255) ccGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCAt < 2:5519446/150‑1 (MQ=255) cGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATa > 1:4288904/1‑150 (MQ=255) gAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATaa > 2:4195787/1‑150 (MQ=255) gggCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACa < 1:6094294/150‑1 (MQ=255) cGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACAttt < 1:222803/150‑1 (MQ=255) tAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTAt < 1:3962130/150‑1 (MQ=255) aGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGa < 2:6753322/150‑1 (MQ=255) aGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGa < 1:1511396/150‑1 (MQ=255) aGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGa < 2:3489622/150‑1 (MQ=255) gCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑TCGTGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAg < 1:5590270/150‑1 (MQ=255) ccTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGc > 1:1600242/1‑150 (MQ=255) ccTGGCCATCGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCGAGAAGACTGATCTCGACAAACCCCCCGTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGc < 2:1526448/150‑1 (MQ=255) tGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCaa > 1:444411/1‑150 (MQ=255) ggCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCaaa < 2:4416199/150‑1 (MQ=255) gCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAAc < 1:2584759/150‑1 (MQ=255) tGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCAtt < 1:656565/150‑1 (MQ=255) tGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCAtt < 2:6556937/150‑1 (MQ=255) tGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCAtt < 2:4298280/150‑1 (MQ=255) aGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGac < 2:1730864/150‑1 (MQ=255) atgatgGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGacac > 1:692382/1‑150 (MQ=255) atgGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACaaa < 2:1630083/150‑1 (MQ=255) tgGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACaaaa < 1:6409507/150‑1 (MQ=255) tgGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACaaaa > 1:2083986/1‑150 (MQ=255) ggcggcGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAat > 2:5196005/1‑150 (MQ=255) cggcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAatat < 2:1865553/150‑1 (MQ=255) gcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 2:712810/150‑1 (MQ=255) gcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 2:1259178/150‑1 (MQ=255) gcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 2:216874/150‑1 (MQ=255) gcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 2:2944612/150‑1 (MQ=255) gcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 2:3732232/150‑1 (MQ=255) gcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 1:829673/150‑1 (MQ=255) gcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 1:4313702/150‑1 (MQ=255) gcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 1:545828/150‑1 (MQ=255) gtgtGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACATTGCCCGCATCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGTGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATTATcatac > 2:6364808/1‑150 (MQ=255) tgACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGcatactca > 1:2940014/1‑150 (MQ=255) gACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGcatactcat > 2:5892689/1‑150 (MQ=255) tGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCttttttt > 1:5332135/1‑66 (MQ=255) tGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCatactcatactc > 1:374414/1‑150 (MQ=255) ggAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGc < 2:2768260/150‑1 (MQ=255) ggAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGc < 2:5987525/150‑1 (MQ=255) aaaGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTcc < 1:1337768/150‑1 (MQ=255) aaaGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTcc > 1:6010588/1‑150 (MQ=255) gCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCATTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCAGTGACACAAAATATGAGCATACTCATACTCGCTCCATCAcc < 1:1976421/150‑1 (MQ=255) gaagaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGAt < 1:2803924/150‑1 (MQ=255) aagaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATa < 1:1192670/150‑1 (MQ=255) aagaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATa < 2:464763/150‑1 (MQ=255) aagaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATa < 1:412681/150‑1 (MQ=255) aagaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATa < 1:463305/150‑1 (MQ=255) agaCTGATTTCGACAAACCCACCTTGCCAGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTTAATTATGGGTACCACCATAACATTTATGAGCAAAACCATTGAAACAAAATATTAGCATACTCATACTCTCTCCATCACCGGATAg > 1:4734674/1‑150 (MQ=255) gaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGa > 1:3308565/1‑93 (MQ=255) tGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGacac < 1:6774464/150‑1 (MQ=255) aTTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCg > 2:6084675/1‑150 (MQ=255) tttCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCgg > 2:2860143/1‑150 (MQ=255) ttCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGc < 1:4796106/150‑1 (MQ=255) ttCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGc < 1:3435983/150‑1 (MQ=255) ctaCAAACCCACCTTGCCCGCCTCGA‑GCGGGATTTTTTTGCGCCATAGAAAAGTGAATCATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCa < 1:5644564/148‑1 (MQ=255) gACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAg > 1:1133800/1‑150 (MQ=255) gACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAg > 2:2440907/1‑150 (MQ=255) aCAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGc > 1:5387089/1‑150 (MQ=255) ccACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGcaacaca > 2:1354858/1‑148 (MQ=255) ccACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACaaa < 1:3097763/150‑1 (MQ=255) ccACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACaaa > 2:2588980/1‑150 (MQ=255) ccACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACaaa > 1:4963048/1‑150 (MQ=255) ccACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACaaa < 2:1936448/150‑1 (MQ=255) cACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACACAg < 1:2912457/150‑1 (MQ=255) aCCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAgg < 1:5102126/150‑1 (MQ=255) cTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCa < 2:3157807/150‑1 (MQ=255) cTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGATCCATCACCGGATAGACACCGGCCAGCAACAAAGGCa > 2:6231687/1‑150 (MQ=255) aaagCCCG‑CTCGAGGCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCa > 2:5165583/4‑150 (MQ=255) aagCCCG‑CTCGAGGCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAg > 1:3367033/3‑150 (MQ=255) ccGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACaaa > 1:5218972/1‑141 (MQ=255) cTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGAAAGTc < 2:5006131/150‑1 (MQ=255) a‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCGACAAAGGCAGCGAAAGTCGCCa < 1:4195787/150‑1 (MQ=255) a‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGAAAGTCGCCa < 1:2037289/150‑1 (MQ=255) | GGAATCCCAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGAAAGTCGCCA > NC_002947/4420931‑4421229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |