| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,686,784:1 | +C | 6.6% | coding (79/1431 nt) | mltD → | membrane‑bound lytic murein transglycosylase D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,686,784 | 1 | . | C | 6.6% | 1311.8 / 80.7 | 303 | coding (79/1431 nt) | mltD | membrane‑bound lytic murein transglycosylase D |
| Reads supporting (aligned to +/- strand): ref base . (154/129); new base C (8/12); total (162/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 316 total aligned reads displayed.
CAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCAT > NC_002947/4686635‑4686932 | cAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAg > 1:2052500/1‑150 (MQ=255) aaaGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCGGGATACGTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAGCCGCTCCTTCCGTCGCCCTGACGCGCCGGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑c > 1:371355/1‑150 (MQ=255) aaaGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑c > 1:31553/1‑150 (MQ=255) aaaGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑c > 1:4887512/1‑150 (MQ=255) aaaGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑c > 1:3964981/1‑150 (MQ=255) aGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCa < 2:288282/150‑1 (MQ=255) gTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCAcc > 2:1934302/1‑150 (MQ=255) gACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtg < 2:1386954/150‑1 (MQ=255) ccAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggt < 2:763471/150‑1 (MQ=255) ccAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggt < 2:1084784/150‑1 (MQ=255) ccAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATAAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggt < 2:4871933/150‑1 (MQ=255) cAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggtg > 2:353114/1‑150 (MQ=255) aGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggtgg > 1:5898371/1‑150 (MQ=255) gCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGc > 1:3899193/1‑150 (MQ=255) gCCAGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTAATTCAGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGc > 1:767543/1‑150 (MQ=255) ccGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTg > 1:1404118/1‑150 (MQ=255) ccGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTg > 1:3786768/1‑150 (MQ=255) gCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCCACCAAGGT‑GGCTGCCagg < 1:6065071/150‑2 (MQ=255) gCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCCACCAAGGT‑GGCTGCCagg < 1:5486575/150‑2 (MQ=255) gCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCaga < 1:2131010/150‑1 (MQ=255) ggTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCTCTGGCAGCCCACCAAGGT‑GGCTGCCAGGGc < 2:6697237/150‑1 (MQ=255) tCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCAccc < 1:3345725/150‑1 (MQ=255) tCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCAGTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCAccc < 1:4654092/150‑1 (MQ=255) tAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGt > 2:926601/1‑150 (MQ=255) gAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCa < 2:1139626/150‑1 (MQ=255) gAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCa > 2:2759796/1‑150 (MQ=255) gAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCa > 2:5356831/1‑150 (MQ=255) cGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTc < 1:4092511/150‑1 (MQ=255) ccGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCTCTGGCAGCCCACCAAGGT‑GGCTGCCAGGGcc < 2:4705046/137‑2 (MQ=38) ccGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcga < 2:5532441/150‑1 (MQ=255) ccGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcga > 1:4741198/1‑150 (MQ=255) ccGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcga < 1:4293580/150‑1 (MQ=255) cGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcgac < 2:1493116/150‑1 (MQ=255) gAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcgacg > 2:2545252/1‑150 (MQ=255) gAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcgacg > 2:5152385/1‑150 (MQ=255) gAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcgacg > 2:4095719/1‑150 (MQ=255) gAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcgacg > 2:3860614/1‑150 (MQ=255) aaCTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcgacga > 1:1970720/1‑150 (MQ=255) tttCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCg > 2:6383826/1‑150 (MQ=255) cGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATa < 1:2356963/150‑1 (MQ=255) cGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATa < 1:1028372/150‑1 (MQ=255) ccGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCg > 1:1601491/1‑150 (MQ=255) cTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTcgcgcg > 1:1326527/1‑150 (MQ=255) cTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTcgcgcg > 1:4446481/1‑150 (MQ=255) cTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTcgcgcg > 1:947876/1‑150 (MQ=255) gTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGca < 2:4308946/150‑1 (MQ=255) tATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGcac > 2:6290222/1‑150 (MQ=255) cAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAAc < 1:3095910/150‑1 (MQ=255) cAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAAc > 2:4386942/1‑150 (MQ=255) aGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACt > 1:2924344/1‑150 (MQ=255) cGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTAcc < 1:6815420/150‑1 (MQ=255) gATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCa < 1:654757/150‑1 (MQ=255) gATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCa < 1:2471492/150‑1 (MQ=255) cTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCAc > 2:4432352/1‑150 (MQ=255) cTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCAc < 2:4815520/150‑1 (MQ=255) ttCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCCCAACTACCAGGCACg > 1:6353726/1‑150 (MQ=255) ttCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACg > 2:330032/1‑150 (MQ=255) tCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACgg < 1:3052097/150‑1 (MQ=255) cccGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGa > 2:1312470/1‑150 (MQ=255) ccGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGAt < 2:204815/150‑1 (MQ=255) cGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATc > 2:5758556/1‑150 (MQ=255) gTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCa > 2:3782439/1‑150 (MQ=255) tAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCaa < 2:2230009/150‑1 (MQ=255) aGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAg < 1:173711/150‑1 (MQ=255) cGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGcac > 1:2810135/1‑150 (MQ=255) gCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGcaca > 1:1887475/1‑150 (MQ=255) aGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACaaa > 1:6252183/1‑150 (MQ=255) gAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAAc < 2:518563/150‑1 (MQ=255) ccTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCtt < 1:1518577/150‑1 (MQ=255) ctctCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTc > 1:326599/1‑150 (MQ=255) ctctCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACAACCAGGCACGGATCAAGCACAAACCTTc > 1:6298310/1‑150 (MQ=255) tctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTcc > 1:1173927/1‑150 (MQ=255) tctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTcc > 1:3932702/1‑150 (MQ=255) tctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATACGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTcc > 1:2573292/1‑150 (MQ=255) ctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTccc > 2:3186841/1‑150 (MQ=255) cATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCg > 2:5028293/1‑150 (MQ=255) aTTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCgc > 1:1201369/1‑150 (MQ=255) aTTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCgc > 2:1802292/1‑150 (MQ=255) gTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGctgctg < 1:1296081/150‑1 (MQ=255) gTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCATCCCCGctgctg > 1:5758059/1‑150 (MQ=255) cGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGt < 1:531528/150‑1 (MQ=255) gCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTc < 1:6200928/150‑1 (MQ=255) tGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgc > 2:851633/1‑150 (MQ=255) gcgcCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCCGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccggc < 2:3947451/150‑1 (MQ=255) gcgcCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccggc > 2:2632120/1‑150 (MQ=255) gcgcCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccggc < 2:6018193/150‑1 (MQ=255) cTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGaa < 1:6705015/150‑1 (MQ=255) ggCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACa < 1:5253733/150‑1 (MQ=255) cccAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAgg > 2:3010637/1‑150 (MQ=255) aGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTAAAGCCGGCCGAACAGGCGCCGCAg < 1:4428495/150‑1 (MQ=255) gTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAgg > 1:1839702/1‑150 (MQ=255) gCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCCCGGAACAAGCACAAACCTTCCCCGCTGCTGGTCCAGCCGGCCGAACAGGCGCCGCAGGATGTCTgg > 1:5991787/1‑150 (MQ=255) gCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTgg > 2:5917284/1‑150 (MQ=255) gCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTgg < 2:4252994/150‑1 (MQ=255) gCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTgg < 2:3802073/150‑1 (MQ=255) ctcTGGCAGCCCACCAAGGT‑GGCTGCCAGGGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTggg > 1:4599508/3‑150 (MQ=255) tcTGGCAGCCCACCAAGGT‑GGCTGCCAGGGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGa > 2:314451/2‑150 (MQ=255) tcTGGCAGCCCACCAAGGT‑GGCTGCCAGGGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGa > 1:2218545/2‑150 (MQ=255) ccTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGa < 2:6110775/150‑1 (MQ=255) ccTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGa > 2:3702887/1‑150 (MQ=255) | CAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCAT > NC_002947/4686635‑4686932 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |