| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,185,776:1 | +G | 100% | intergenic (‑44/‑127) | PP_1033 ← / → cumA | sulfatase domain‑containing protein/multicopper oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,185,776 | 1 | . | G | 78.2% | 816.2 / 249.5 | 294 | intergenic (‑44/‑127) | PP_1033/cumA | sulfatase domain‑containing protein/multicopper oxidase |
| Reads supporting (aligned to +/- strand): ref base . (28/36); new base G (127/102); total (156/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 319 total aligned reads displayed.
ACATGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAGGTA > NC_002947/1185627‑1185920 | caTGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑g < 2:3268268/150‑1 (MQ=255) aTGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑gg > 1:3034112/1‑150 (MQ=255) aTGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑gg < 1:4753542/150‑1 (MQ=255) tGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑ggg > 2:4855704/1‑150 (MQ=255) tGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑ggg < 1:249386/150‑1 (MQ=255) gtgtCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑ggggg < 1:2906172/150‑1 (MQ=255) gtgtCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑ggggg < 1:4987127/150‑1 (MQ=255) gtgtCTACCGTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑ggggg < 1:5738575/150‑1 (MQ=255) tgtCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑gggggg > 2:1811527/1‑150 (MQ=255) tCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑gggggggg > 2:133394/1‑149 (MQ=255) tACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑ggggggggcg > 1:3869252/1‑147 (MQ=255) cTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGAt > 2:3075969/1‑150 (MQ=255) ttCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGAtt > 1:1419649/1‑150 (MQ=255) ttCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGAtt < 1:4660301/150‑1 (MQ=255) ttCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGAtt > 2:601218/1‑150 (MQ=255) tCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTg > 2:5231180/1‑150 (MQ=255) tCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGc < 2:1559524/150‑1 (MQ=255) gCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGcc < 2:877954/150‑1 (MQ=255) cATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCa > 2:5315889/1‑150 (MQ=255) tCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTgg < 1:3122240/150‑1 (MQ=255) cacaGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTgg < 1:2182529/150‑1 (MQ=255) acaGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGc > 1:5822172/1‑150 (MQ=255) acaGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGc > 2:6476180/1‑150 (MQ=255) agCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATc < 2:2562094/150‑1 (MQ=255) cGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTGTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATcgcg > 1:1202872/1‑150 (MQ=255) gCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGc > 1:2024062/1‑150 (MQ=255) ttGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTa > 2:6649269/1‑150 (MQ=255) tGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCCAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTACCCgg > 1:1378054/1‑150 (MQ=255) tGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCgg > 2:6624108/1‑150 (MQ=255) aaGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGcc > 2:5197076/1‑150 (MQ=255) gCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGt > 1:1945159/1‑150 (MQ=255) gATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGGTTAGCGGCCgcga < 1:3985579/150‑4 (MQ=255) gATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGc < 2:479687/150‑1 (MQ=255) gATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGc < 2:1440959/150‑1 (MQ=255) ggCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACaa < 2:3692781/150‑1 (MQ=255) ggCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACaa > 1:2696135/1‑150 (MQ=255) gCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACt > 1:3737353/1‑150 (MQ=255) cAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACtt > 2:2190172/1‑150 (MQ=255) aaaaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCACGTCCGCCCCGGGGCGGTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACCAGACTTc > 1:649671/1‑150 (MQ=255) aaaaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTc > 1:1492084/1‑150 (MQ=255) aaaaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTc < 2:6222806/150‑1 (MQ=255) aaaaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGCACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTc > 2:3576106/1‑150 (MQ=255) aaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGTCTTCAc < 1:928335/150‑1 (MQ=255) aaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGCACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCAc < 1:3576106/150‑1 (MQ=255) ccAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTaa < 1:179559/150‑1 (MQ=255) cAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAat < 2:734979/150‑1 (MQ=255) cACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATAtt > 1:562187/1‑150 (MQ=255) cACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATAtt < 1:4571996/150‑1 (MQ=255) ccTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTc < 2:4105798/150‑1 (MQ=255) tGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACATAATATTTCGc > 1:6127361/1‑150 (MQ=255) gcACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCaaa > 2:3383311/1‑150 (MQ=255) cccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCTCTTAATATTTCGCAAATGCa > 2:323013/1‑150 (MQ=255) cccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCa > 1:6724123/1‑150 (MQ=255) cccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCa > 1:1654659/1‑150 (MQ=255) cccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCa > 2:2948608/1‑150 (MQ=255) cccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCa > 2:5439747/1‑150 (MQ=255) cccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTAGCAAATGCa > 1:6386381/1‑150 (MQ=255) cccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAg < 2:3825269/150‑1 (MQ=255) cccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAg < 2:1911882/150‑1 (MQ=255) ccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAg < 1:5489887/150‑1 (MQ=255) gTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGgt > 2:5678228/1‑150 (MQ=255) gTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGgt < 2:2015435/150‑1 (MQ=255) gTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGgt > 2:6310562/1‑150 (MQ=255) ttAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGGAt > 2:2769899/1‑150 (MQ=255) ttAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATc < 2:1963566/150‑1 (MQ=255) ttAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGGCTTCACTTAATATTTCGCAAATGCAGGTGTATCGTAtt > 2:4296437/1‑150 (MQ=255) ttAAGCAGCCCACCCTGAATGCGGCACGTCAGCCCCGGGGCGTTGGGTGGGTCCCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTAtg > 2:1054233/1‑149 (MQ=255) tAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCg < 1:1739168/150‑1 (MQ=255) aaGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCg < 2:654894/150‑1 (MQ=255) agcagcCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCACAAATGCAGGTGTATCGTATTAGc > 2:6783293/1‑150 (MQ=255) gcagcCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCCGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGcc > 1:5299606/1‑150 (MQ=255) cagcCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGccc < 2:2591146/150‑1 (MQ=255) cccACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTc > 2:2484627/1‑150 (MQ=255) ccACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCAt > 1:709897/1‑150 (MQ=255) cACCCTGAATTCGGCAAGTCTGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTTCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATc < 2:1086127/150‑1 (MQ=255) cTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTCACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGcc > 2:4127743/1‑150 (MQ=255) tGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCa < 2:1673938/150‑1 (MQ=255) tGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCa < 2:2107011/150‑1 (MQ=255) tGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCa < 1:4021937/150‑1 (MQ=255) tGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTGCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCa > 1:4819757/1‑150 (MQ=255) aTTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGcc > 1:3438828/1‑150 (MQ=255) gCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctgc > 2:3872702/1‑150 (MQ=255) gCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctgc > 2:5073255/1‑150 (MQ=255) gCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctgct > 2:3453442/1‑150 (MQ=255) aaGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctgctg > 1:2785987/1‑150 (MQ=255) aaGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctgctg > 1:1080458/1‑150 (MQ=255) aGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTgg < 2:5765453/150‑1 (MQ=255) aGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGc < 2:5506725/150‑1 (MQ=255) cGGGGCGTTGGTTGGGTACCGT‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTGAATATATCGCAAATGCAGGTGTATCGTATTCGCCCGTCATCGCCAGCCCCTGCTGGCGGACGGAtt > 1:105402/1‑150 (MQ=255) cGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGAt > 2:4368775/1‑150 (MQ=255) cGGGGCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGAt > 1:3943889/1‑150 (MQ=255) ggggCGTTGGTTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGAtt < 1:5231180/150‑1 (MQ=255) cGTTGGGTGGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTgcgc < 1:4117797/150‑1 (MQ=255) gttggttgGGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCa > 2:2902203/1‑150 (MQ=255) ggttggGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGaa > 2:4300632/1‑150 (MQ=255) ggttggGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGaa > 2:3986187/1‑150 (MQ=255) gttggGTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGaaa > 1:2600123/1‑150 (MQ=255) gggTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGa < 1:6310562/150‑1 (MQ=255) gTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAGTATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAgg > 1:3222621/1‑150 (MQ=255) gTACCGAGGGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAgg > 2:4610724/1‑150 (MQ=255) | ACATGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑GGGGGGGCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAGGTA > NC_002947/1185627‑1185920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |