| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,397,876:1 | +A | 17.3% | intergenic (+91/‑95) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,397,876 | 1 | . | A | 17.3% | 629.1 / 143.5 | 179 | intergenic (+91/‑95) | PP_1214/ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Reads supporting (aligned to +/- strand): ref base . (74/74); new base A (22/9); total (96/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
TGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGG > NC_002947/1397727‑1398025 | tGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGcc < 2:2841657/150‑1 (MQ=255)tGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGGGAACCCGCGCCTACAGGTCTT‑ACGcc > 1:6831517/1‑150 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGcc‑c < 1:3106866/150‑1 (MQ=255) cAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑Ca < 2:2174070/150‑1 (MQ=255) cAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑Ca < 2:5970799/150‑1 (MQ=255) aGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CAt < 1:1205580/150‑1 (MQ=255) gTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCaa < 1:922531/150‑1 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAAt < 1:5165714/150‑1 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTAGCGGGTAAACCCCCGCCGACAGGGATT‑ACGCC‑CATTTGAAAt > 1:5533252/1‑150 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGAGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGTATT‑ACGCC‑CCTTTCAAAtg > 2:5541668/1‑150 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggt < 2:4523831/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggt < 2:6339596/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggt < 2:24326/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggtg < 1:248728/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggtg < 1:5340517/150‑1 (MQ=255) aaTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGc < 2:3276840/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCa < 1:589273/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCa < 2:4442774/150‑1 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTAc > 2:2707158/1‑150 (MQ=255) cAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAATACCGCGCCAACAGGGATT‑TCGCC‑CATTTCAAATTGGGTGGAggtcc > 1:2235927/1‑146 (MQ=255) cAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTAcc < 1:4891696/150‑1 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCt < 2:382811/150‑1 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCt < 1:4575035/150‑1 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCt < 2:4456657/150‑1 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGGATT‑ACGCC‑CATTTCAAATGTGGTGCAGTAGCt > 2:3531789/1‑150 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTTGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGt < 1:6747903/150‑1 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGt < 1:2318609/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 2:4179345/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 1:6603091/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTa < 2:6511708/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTa < 1:1605254/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTAATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTa < 1:4479374/150‑1 (MQ=18) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:2552969/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 2:576410/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa < 2:5266483/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa < 1:3561931/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa < 2:2120183/150‑1 (MQ=255) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGc < 2:5318170/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 1:6118193/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCTACAGGTATT‑ACGCC‑CAATTAAAATGTTGTGCAGGAACGGTAGGAGCggg > 2:140582/1‑150 (MQ=255) agaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGt < 1:5436084/150‑1 (MQ=255) agaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGt < 2:2398604/150‑1 (MQ=255) cATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGCGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑c < 1:1289807/150‑1 (MQ=17) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑cc < 1:1651640/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCGTTAGCCGGTAAACCCCCGCCGAAAGGTGGA‑AAGCC‑CCTTTGAAAAGTTGGGCAGTAACGGTCGGAGGGGGTTGA‑‑ca > 1:3883537/1‑149 (MQ=255) tGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑ccc < 1:6325113/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCcgc < 1:5171248/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCcgc < 2:6020190/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGGATT‑ACGCC‑CAATTCAAATGTGGGGCACTACCGGTAGGCGCGGGGTTA‑‑CCcgc > 2:6465400/1‑150 (MQ=38) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCACCAAAAGGTATT‑AAGCC‑CCTTTCAAATGTGGTTGAGTAAAGGTAGGGGCGGGGTTT‑‑CCcgc > 2:4842660/1‑150 (MQ=255) aaaaCCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTACGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCcgcg < 2:5161397/150‑1 (MQ=255) gATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTACCGGTATT‑ACGCC‑AATTTCAAATGTGGTGCTGTACCTGTAGGAGCGGTTTTA‑‑CCCGCGAAAGGGCCGGCGCAGtt < 2:2796864/150‑1 (MQ=37) ttGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑AAGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGGGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGGTTGt > 2:3974293/1‑150 (MQ=255) aTTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGTATT‑ACGCC‑CATTTAAAATGGGGTGCAGTACCAGTAGGAGCGGGTTTA‑‑CCCGCCAAAGGGCCGGCGCCGTTTGTAgaga > 2:2827153/1‑150 (MQ=37) ttttGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCCCACCAACAGGGAAT‑AAGCC‑CAATTAAAATTGGGTGGAGTACCAGTTGGGGCGGGGGTA‑‑ACCCCGAAAGGGCCCGCCCAGTTTggtgtgat > 2:2882750/1‑143 (MQ=255) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGt > 2:2495179/1‑97 (MQ=255) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGGAAACCCCCGCCAACAAGGATTAACCCC‑CATTAAAAAT‑TGGTGCAGTAACGGTGGGAGCGGGGTTA‑‑ACCCCCAAAGGGCCGGCGCCCGTTGTTGAGATGCAGCAtt > 2:720432/1‑150 (MQ=255) gTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CTTTTCAATTGTGGTGCAGTACCTGTTGGCGCGGTTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACggg < 2:1037973/150‑1 (MQ=38) gcgcCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACCGGTATT‑AAGCC‑CAATTCAAAAGTGGTGCAGTACCGGTAGGAGCGGGTTTA‑‑ACCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGGATTATGa > 2:3907904/1‑150 (MQ=37) tttCGCGGGTAAACCCGCTCCTACAGGTATT‑AACCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGGTTGTAGAGATGCATCATTTTTTAGAAGGGCGTTATGACTCTGATTATAGGTAt > 1:431498/1‑150 (MQ=25) ttCGCGGGTAAACCCGCTCCTACTGGTATT‑ACGCC‑CTTTTCAATTGTGGTGCAGTACCTGTTGGCGGGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATc < 2:6831517/150‑1 (MQ=38) aaCCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTGTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCt > 1:2127809/1‑150 (MQ=255) ccGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:4103863/1‑150 (MQ=255) ccGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCACAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:4667504/1‑150 (MQ=17) ccGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCGGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTGGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:3443939/1‑150 (MQ=18) cGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgcg > 2:6176056/1‑150 (MQ=255) gCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCgcgc > 1:3984066/1‑150 (MQ=255) gCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCACAGTGTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCgcgc > 1:603342/1‑150 (MQ=17) tCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:826251/1‑150 (MQ=255) tCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCACAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:1663180/1‑150 (MQ=18) cTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 1:3345518/1‑150 (MQ=255) cTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 1:5826440/1‑150 (MQ=255) cTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:1882469/1‑150 (MQ=255) cTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:4701869/1‑150 (MQ=255) cTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:1278082/1‑150 (MQ=255) cTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:6745984/1‑150 (MQ=18) cTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:4282644/1‑150 (MQ=18) cTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGGAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:1532731/1‑150 (MQ=18) tACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:3178621/1‑150 (MQ=255) tACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:4977791/1‑150 (MQ=21) tACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:6317736/1‑150 (MQ=21) tACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:6390898/1‑150 (MQ=21) tACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:1424245/1‑150 (MQ=21) tACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:1198156/1‑150 (MQ=21) aCAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAcc > 2:4871730/1‑150 (MQ=255) cAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCg > 2:2892553/1‑150 (MQ=255) ggTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGc > 2:6737572/1‑150 (MQ=255) gTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 2:2059175/1‑150 (MQ=255) gTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 1:550240/1‑150 (MQ=255) gTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 1:3455929/1‑150 (MQ=255) tt‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATg > 1:4442348/1‑150 (MQ=255) tt‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGGTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATg > 2:5747005/1‑150 (MQ=255) atcccGCC‑CATTTCAAGGTTGGTGCTGTACC‑GTTGG‑GCGGGCTAAACCCCGCTAACGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTAt < 1:4768865/146‑1 (MQ=255) cGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGAGTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCg > 1:627455/1‑150 (MQ=255) gCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGt > 2:3040481/1‑150 (MQ=255) c‑cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 1:3371563/1‑150 (MQ=255) c‑cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 1:5010370/1‑150 (MQ=255) c‑cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 1:1946557/1‑150 (MQ=255) c‑cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTAA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 2:537569/1‑150 (MQ=255) c‑cAGTTCAAATGTGGAGCAGTACCTGGAGGAGCGGGTTTA‑‑CCCGCGAAAGGGACGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTATGATTCTAGGTCTCGACCCCGGCTCGCGCATCACAGGCTATGGCGTgg > 2:4601466/1‑150 (MQ=255) | TGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGG > NC_002947/1397727‑1398025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |