| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 850934 = | 180 (0.610) | 20 (0.070) | 14/264 | NT | 9.1% | intergenic (‑514/‑291) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
| ? | NC_002947 | 851020 = | 225 (0.800) | intergenic (‑600/‑205) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase | |||||
CCGGCTTTTGATCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/851085‑850934‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTT > NC_002947/851020‑851165 CCGGCTTTTGATCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCA < 1:6080104/150‑1 CGGCTTTTGATCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAA > 2:4562686/1‑150 CGGCTTTTGATCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAA < 2:5792152/150‑1 AGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCA > 1:174159/1‑150 AACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCACGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCA > 2:4122892/1‑148 AACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCA < 1:4122892/148‑1 AGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAA > 1:4712722/1‑150 AGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAA > 2:5190597/1‑150 AGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAA > 2:6819417/1‑150 GCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAG > 2:1920593/1‑150 GCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAA > 2:5122178/1‑150 GCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAA > 1:3467961/1‑150 GAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCT > 1:3598479/1‑150 GGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGA > 1:2281750/1‑150 GTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAA > 2:6583307/1‑150 GTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCC‑TGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAA > 1:2733064/1‑150 TGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAA > 1:2025843/1‑150 ccATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAA < 2:5989977/59‑1 ccATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAA > 1:5989977/3‑61 GGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAG > 1:6308355/1‑150 GGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAG > 1:2042657/1‑150 TCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCC‑TGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTAC > 1:6725013/1‑150 GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCG > 2:5173220/1‑150 GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCG > 2:3690157/1‑150 TCCTCCCGGGAGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAG > 1:710316/1‑150 CGGGAGCAAGCCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGACAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACG > 2:5988370/1‑150 GGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGT > 1:5102521/1‑150 gcgaAAGGCCTGCGTTCGGCCTCCTTAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTG < 1:2462654/146‑1 GAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTG < 1:1920593/150‑1 cCAAGCCCTCCGCGCGGCCCCCTGACGCCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGT < 1:4935582/149‑1 GCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGT > 2:2302509/1‑150 GCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGT > 2:2302339/1‑150 GCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGT > 2:2219621/1‑150 GCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGT > 1:4421951/1‑150 CAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAACAGCCAGCTCAAAAGCCGGCCAGACCTGCACACACCGCTAGGGCAGGCTACGAAACGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTT < 2:6690210/150‑1 CAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTT > 2:1524682/1‑150 CCGGCTTTTGATCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/851085‑850934‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTT > NC_002947/851020‑851165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |