New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2308110 | 243 (0.830) | 14 (0.050) | 8/254 | NT | 5.7% | intergenic (‑203/+92) | PP_mr30/PP_2027 | C4 ncRNA/hypothetical protein |
? | NC_002947 | = 2308170 | 235 (0.870) | intergenic (‑263/+32) | PP_mr30/PP_2027 | C4 ncRNA/hypothetical protein |
CCGAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2307952‑2308110 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACCC < NC_002947/2308170‑2308022 CCGAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGT > 2:4191260/1‑150 CGAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTT > 2:6459637/1‑150 CGAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTT > 2:4861936/1‑150 GAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTC > 1:6727527/1‑150 GAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTC < 1:5055829/150‑1 AAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCG > 2:2670752/1‑150 AGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGC < 1:5950563/150‑1 GCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGGAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCG < 2:1969848/150‑1 CGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG < 1:2577075/150‑1 CGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG < 1:2577306/150‑1 CGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG < 1:2577368/150‑1 CGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG < 2:4402621/150‑1 CGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG < 1:5422871/150‑1 CGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG < 1:4776419/150‑1 GACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCTCCGGTGTTCGCGGG > 1:6029046/1‑150 GACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGG > 1:5193834/1‑150 ACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGC < 2:5926480/150‑1 ACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGC > 2:223663/1‑150 TTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCGTGCCCGCgaa < 2:1451514/150‑4 CCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCG > 2:4373380/1‑150 CAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTT < 2:4165601/150‑1 CGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCG < 1:4373380/150‑1 TTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAG‑‑‑‑‑GTACGCCGAGAACCTTGCGCCGTACCTGTG < 1:1989000/150‑1 AGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG < 2:5555282/150‑1 AGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG < 1:2447348/150‑1 AGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG < 1:2447347/150‑1 AGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG < 1:2447037/150‑1 AGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG < 2:1940730/150‑1 GCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAG < 2:5312318/150‑1 CGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGG < 1:4886502/150‑1 CGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGG < 1:4886498/150‑1 gttGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGG < 1:3453550/147‑1 cttgGCGGGCTTGCCCGCTCCCACTGACCGCGTACGCCGAGAAGCTGGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTA < 2:5743241/146‑1 gTCGCGGGCATGCCCGCTCCCACTGCCCGCGCCCGCCGAGCACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG < 1:4633803/149‑1 TTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACTCCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG > 2:558035/1‑150 TTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG > 2:5040361/1‑150 TTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG > 2:5040269/1‑150 TTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG < 1:6729944/150‑1 TTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG > 2:102465/1‑150 TTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG < 1:6729807/150‑1 TTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG > 1:319441/1‑150 TTCGCGGGCAGGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG < 1:1248123/150‑1 gtGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAA > 1:4191204/3‑150 GCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAA < 2:3968567/150‑1 GCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAA > 2:1913430/1‑150 GCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAA < 2:4219829/150‑1 CGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAAT > 1:1474496/1‑150 GGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATT > 1:4430470/1‑150 GGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCCACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTA > 1:733509/1‑150 GGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCCACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTA > 1:6326470/1‑150 GCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTAC > 1:311019/1‑150 ATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACCC > 1:3289606/1‑150 CCGAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2307952‑2308110 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACCC < NC_002947/2308170‑2308022 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |