New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4538561 = | 143 (0.490) | 7 (0.030) | 5/250 | NT | 5.0% | intergenic (+10/‑164) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase |
? | NC_002947 | 4538650 = | 134 (0.500) | intergenic (+99/‑75) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase |
GTGTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4538720‑4538561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaggcaacacAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGAT > NC_002947/4538650‑4538798 GTGTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGGCCCTTTCACCCGCGAAGAGGCCCGCA > 2:747362/1‑150 TCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAG > 2:4382859/1‑150 TCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCACCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAG > 2:2182876/1‑150 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCCGGTGAACCCGCTCCAACACTGTGTGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGC > 2:4090872/1‑150 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCAACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGC > 2:4090845/1‑150 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCAACACTGTGAGGTCCCTTTAACCCGCGAAGAGGCCCGCACAGGC > 2:679997/1‑150 CCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTTCCTGTGTTGGCCTCTTAGCAGGTGAACCCGCTCCTACACAGTTAGGTACCATTCACCCCCGAAGAGGCCCGCACAGGCA > 1:5627633/1‑150 GTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACAGTGAGGTCCCGTTAACCCGCCAAGAGGCCCGCACAGGCAACACA > 2:3138579/1‑150 TGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGAC > 2:4351460/1‑150 TGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGA > 1:4331969/1‑150 CCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAT > 1:2892520/1‑150 CCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAT > 2:5331137/1‑150 CTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATG > 1:3334493/1‑150 TCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGA > 1:923108/1‑150 TCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGA > 1:813834/1‑150 CACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTAGTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGAT < 2:5691794/150‑1 ACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATG < 2:4501197/150‑1 ACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTACGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATG > 1:4856249/1‑150 ACAGCCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATG < 1:4149695/150‑1 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 1:2086146/1‑150 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 2:6598327/1‑150 GGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCAC > 2:5413126/1‑150 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACC > 1:3898793/1‑150 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACC > 2:2170793/1‑150 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGG < 1:6645183/135‑1 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGG < 1:6645131/135‑1 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGG > 2:6645183/1‑135 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGG > 2:6645131/1‑135 AACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGG < 1:1077092/150‑1 CACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTG > 2:4390167/1‑150 ACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGA < 1:1316730/150‑1 ACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGA > 2:5568897/1‑150 ACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGA > 2:4482003/1‑150 CAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGAGGCACCGGTGAT < 2:2111636/150‑1 GTGTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4538720‑4538561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaggcaacacAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGAT > NC_002947/4538650‑4538798 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |