| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6080732 = | 320 (1.090) | 5 (0.020) | 5/264 | NT | 1.6% | coding (835/2289 nt) | PP_5328 | phosphate ABC transporter permease |
| ? | NC_002947 | 6080777 = | 307 (1.090) | coding (790/2289 nt) | PP_5328 | phosphate ABC transporter permease | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCACGGAAAACATGATGACCGAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6080884‑6080732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCCG > NC_002947/6080777‑6080925 GCACGGAAAACATGATGACCGAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCA < 1:1380814/150‑1GCACGGAAAACATGATGACCGAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCA < 2:3305012/150‑1GCACGGAAAACATGATGACCGAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCA > 2:2085920/1‑150GCACGGAAAACATGATGACCGAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAAGGACCGAGACGGTGAAGAATATCTTCATCGACCCACCCCAGCACTGGCGGTACGTGATCAACGCCCGTGCCACGGCC‑‑‑GA‑CGTGTTCA > 2:3799138/1‑150 ACGGAAAACATGATGACCGAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGC < 1:5256864/150‑1 ACGGAAAACATGATGACCGAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGC < 1:2088697/150‑1 GAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGC < 1:5836947/132‑1 GAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGC > 2:5836947/1‑132 CCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCCGTTGATCACGTACAGCCAGTGCGGGCGTGGGTCGATGAAGATATTCTTCACCGTCGCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGGGGTGACCTCTTC > 2:4409533/1‑150 GCACGGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTT > 1:3063475/1‑150 TGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCC > 1:4013147/1‑150 TGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTG < 1:3993030/119‑1 TGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTG > 2:3993030/1‑119 CAGCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGA < 2:6754993/150‑1 CAGCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGA < 2:5205860/150‑1 CAGCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGA < 1:2204530/150‑1 CAGCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGCAGA < 1:2204545/150‑1 GCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGC < 2:4281228/150‑1 GCCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGC < 2:5974729/150‑1 CCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCC > 2:4394396/1‑150 CCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCC > 1:1027129/1‑150 CCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCC > 2:5621881/1‑150 CCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCC > 2:6433166/1‑150 CCAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCC < 2:6436251/150‑1 CAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCCG > 2:2352036/1‑150 CAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCCG < 2:5997130/150‑1 GCACGGAAAACATGATGACCGAAGAGGTCACCACCGAGCAGAACCGCATCGAACTGCCGCAAATGACCGAGACGGTGAAGAATATCTTCATCGACCCACGCCAGCACTGGCTGTACGTGATCAACGGCCGTGCCACGGCC‑‑‑GA‑CGTGTTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6080884‑6080732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccAGTGCTGGCGTGGGTCGATGAAGATATTCTTCACCGTCTCGGTCATTTGCGGCAGTTCGATGCGGTTCTGCTCGGTGGTGACCTCTTCGGTCATCATGTTTTCCGTGCGGGTCAGCTCGACCACCTGCAGATGAGCACCGGTAGAGCCG > NC_002947/6080777‑6080925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |