New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 205558798 (0.330)39 (0.180) 15/200 NT 31.1% intergenic (‑88/+87) PP_1824/PP_1825 Smr domain‑containing protein/hypothetical protein
?NC_002947 = 2055623 101 (0.470)intergenic (‑124/+51) PP_1824/PP_1825 Smr domain‑containing protein/hypothetical protein

Only 100 of 309 total aligned reads displayed.

TGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGAT  >  NC_002947/2055438‑2055736
                                                                                                                                                     |                                                                                                                                                     
tGGCGGATCGGCTTTTCGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTAC                                                                                                                                                       <  2:6873347‑M1/150‑1 (MQ=255)
tGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTAC                                                                                                                                                       <  2:3318773‑M1/150‑1 (MQ=255)
   cGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACggg                                                                                                                                                    <  2:676438/150‑1 (MQ=255)
   cGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACggg                                                                                                                                                    <  1:2203482/150‑1 (MQ=255)
      aTCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGAt                                                                                                                                                 <  2:3349267/150‑1 (MQ=255)
      aTCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCAGGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGAt                                                                                                                                                 <  2:1065088/150‑1 (MQ=255)
          gCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGTACCCGCTCCGACGGGGCTGTca                                                                                                                                             >  2:6182436/1‑150 (MQ=255)
             ttACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACag                                                                                                                                          <  1:2945520/150‑1 (MQ=255)
              tACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACaga                                                                                                                                         <  1:6646221/150‑1 (MQ=255)
              tACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACaga                                                                                                                                         <  1:969797/150‑1 (MQ=255)
                  ccgcGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCCCGCCGACGGGGATGTCACAGAGccc                                                                                                                                     >  2:3642499/1‑150 (MQ=255)
                   cgcgCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcg                                                                                                                                    <  1:6823411‑M1/150‑20 (MQ=255)
                            cGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGAcggcg                                                                                                                           <  1:1160373/150‑1 (MQ=255)
                              gCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCggg                                                                                                                         <  1:1262728/150‑1 (MQ=255)
                              gCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGGGTAACCCCTCCGGCGGGGGTGTGACAGAGCCCCCAGACGGCggg                                                                                                                         >  2:1940067/1‑150 (MQ=255)
                                  tGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGc                                                                                                                     <  1:5552630/150‑1 (MQ=255)
                                  tGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGc                                                                                                                     <  2:3458556/150‑1 (MQ=255)
                                   gAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGGGAACCCGCGCCGACGGGGAAGTCACACAGCCCGAAGACGCCGGGGGGcc                                                                                                                    >  2:4497315/1‑150 (MQ=255)
                                    aaCAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCt                                                                                                                   <  2:1708785/150‑1 (MQ=255)
                                       cgggaAAAAGCGGCGTCTTGCATGATGCCTCCACGTCGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgta                                                                                                                >  1:6013996‑M2/2‑147 (MQ=255)
                                       aGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgta                                                                                                                <  2:1608784‑M1/150‑40 (MQ=255)
                                       aGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgta                                                                                                                >  1:2298932‑M2/1‑147 (MQ=255)
                                       aGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgta                                                                                                                >  1:3442207‑M2/1‑147 (MQ=255)
                                        gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGGACCCCCGCCGACGGGGGTGTCACAGAGCCCCAAGACGGCGGGGGGccgggag                                                                                                               >  2:2773621/1‑145 (MQ=255)
                                        gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtag                                                                                                               >  2:3881633‑M2/1‑146 (MQ=255)
                                         ggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtagg                                                                                                              >  1:1650389‑M1/1‑109 (MQ=255)
                                         ggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtagg                                                                                                              >  2:3713161‑M2/1‑145 (MQ=255)
                                         ggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtagg                                                                                                              >  2:2932679‑M2/1‑145 (MQ=255)
                                         ggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtagg                                                                                                              >  2:4637109‑M2/1‑145 (MQ=255)
                                         ggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCGTCGCGGGGTTTCCCGCTCCGGCGGGGGGGTCAACGAGCCCGGAGACGGCGGGGGGCCGgtagg                                                                                                              <  1:2090562‑M2/150‑6 (MQ=255)
                                          gAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtagga                                                                                                             <  2:6329776‑M1/150‑43 (MQ=255)
                                          gAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtagga                                                                                                             <  2:2640323‑M1/150‑43 (MQ=255)
                                          gAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtagga                                                                                                             >  1:1872646‑M2/1‑144 (MQ=255)
                                            aaaaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagc                                                                                                           <  2:4299606‑M1/150‑45 (MQ=255)
                                            aaaaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagc                                                                                                           >  1:1714262‑M2/1‑142 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg                                                                                                         <  1:1176018‑M1/150‑47 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg                                                                                                         <  2:1237746‑M1/150‑47 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg                                                                                                         <  2:2924163‑M1/150‑47 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg                                                                                                         <  2:3817685‑M1/150‑47 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg                                                                                                         <  1:6376019‑M1/150‑47 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg                                                                                                         >  2:2226728‑M2/1‑140 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg                                                                                                         >  2:5514959‑M2/1‑140 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg                                                                                                         >  1:1752847‑M2/1‑140 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg                                                                                                         >  2:137889‑M2/1‑140 (MQ=255)
                                              aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAACCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg                                                                                                         <  1:919706‑M1/150‑47 (MQ=255)
                                               aTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGTAGACGGCGGGGTGCCTgtaggagcggg                                                                                                        >  1:484939‑M2/1‑139 (MQ=255)
                                               aTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcggg                                                                                                        >  1:6686287‑M2/1‑139 (MQ=255)
                                                    cgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcac                                                                                                   >  1:6256900‑M2/1‑134 (MQ=255)
                                                       cTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccg                                                                                                >  2:5734100‑M2/1‑131 (MQ=255)
                                                          gCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggtgaacccgctc                                                                                             >  2:6523950‑M2/1‑128 (MQ=255)
                                                           cATGAGGCCTCCACGTTGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGGGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaa                                                                                            <  2:4330994‑M1/150‑60 (MQ=255)
                                                             tgatgCCGCCCCGTAGGCGGCGTTGTTTACGCGACGGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTCCGGGGATGTCACAGAGCCCGACGACGGCGGGGTGCCTgtcggagcgggttcacccgcgaaga                                                                                          >  2:424241‑M2/1‑125 (MQ=255)
                                                                   cTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGGGCACCCCCGCCGACGGGGGTGTCCCAGAGCCCCAACACCGCGGGGTGCCGGGGGGAGCGGGGTGACCCCCCCAGCGGcccc                                                                                    >  2:4043150/1‑149 (MQ=255)
                                                                           aGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCGCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCGGTAGGAGCGGGTGCCCCCCCGAAGAGGCCCGCACAGGtt                                                                            >  2:5041653/1‑150 (MQ=39)
                                                                                                gggggggggGTGTGCCGCCGGGGCGGCCCTCTCCGGGGTTTACCCCGCCCCTCGGGGTTTGTCACAGCCCCCCACGCGGGGGGGGTGCCTTTTGGAGCGGGTTCCCCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGc                                                       <  2:877443/147‑1 (MQ=255)
                                                                                                              cAGCCGGGGCGGGCCGCTGCGCGGGTGACCCCGCTCCTCCGGGTCTGACACCGCGCCCGCCGACGGGGGGGTGCCTGTAGGAGGGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTg                                         <  2:3253802/150‑1 (MQ=255)
                                                                                                                      gggggccTGTGCGCGGGTGACCCGGCTCCTACaggcacccccccgacttcgggctctgtgacatccccgtaggtgcgggtacacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtgga                                 <  2:3926054‑M1/148‑119 (MQ=255)
                                                                                                                         ggCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccggaggagcgggttcacccgcgcagaggcccgcacaggctgcccaccgccccacagtcgcgtaaacaacgccgccaacgtggcggc                              >  2:5580660‑M1/1‑29 (MQ=255)
                                                                                                                           ccTCTTCGCGGGTGAACCCGCTCCTACGGGGCTGTCACACAGCCCCCAGACGGCGGGGTGCCGGTAGGCGCGGGTTCACCCGCCAACAGGCCCCCACCCGTTACGCAAAACCAACAAACGTGCTTGTTCATAAGGTGCGGCGGCAGGGTa                            >  2:4704148/1‑150 (MQ=255)
                                                                                                                            gtaggagcgGGTTCACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTaa                           >  2:488590/7‑150 (MQ=255)
                                                                                                                            ccgttCGGGGGTCACCCCGCCCCTCGGGGGATGCCACAGCGCCCCCTGCGGGGGGGGGGCCGGCCGGCGGGGTTACACCCGCTAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTaa                           <  1:5039706/147‑1 (MQ=255)
                                                                                                                             tctTCGCGGGTGAACCCGCTCCTACaggccccccgccgtcttcgggctcggtgacaaccccctaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccccctacctggaggcatca                          >  2:5269054‑M1/1‑25 (MQ=255)
                                                                                                                             tctTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTATGAGCGGGTTAACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAg                          >  2:2809774/1‑150 (MQ=255)
                                                                                                                               tgcgcgGGTGACCCGGCTCCACCGGGTATGACACCGAGCCCGACGACGGCGGGGTGCCTGTTGGAGCGGTTCCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCt                        <  2:6000572/148‑1 (MQ=255)
                                                                                                                                     ggTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcacgac                  >  1:5970796‑M1/1‑17 (MQ=255)
                                                                                                                                      gTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTcccgccc                 >  1:3041286/1‑150 (MQ=255)
                                                                                                                                       tGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTtcatc                                              >  1:2010917/1‑120 (MQ=255)
                                                                                                                                          aCCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacga             >  1:431490‑M1/1‑12 (MQ=255)
                                                                                                                                          aCCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacga             >  1:6761524‑M1/1‑12 (MQ=255)
                                                                                                                                          aCCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacga             <  1:2999562‑M2/150‑103 (MQ=255)
                                                                                                                                           cccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgat            >  1:3919417‑M1/1‑11 (MQ=255)
                                                                                                                                           cccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgat            >  1:6276842‑M1/1‑11 (MQ=255)
                                                                                                                                           cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggc            >  1:812386/1‑150 (MQ=255)
                                                                                                                                           cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggc            >  2:773016/1‑150 (MQ=255)
                                                                                                                                           cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggc            >  1:5235126/1‑150 (MQ=255)
                                                                                                                                           cccGCACCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTTTAGTAGGGGTTACACCCGCTAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggc            <  2:664727/150‑1 (MQ=255)
                                                                                                                                            ccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagccgacgatt           >  1:5599743‑M1/1‑10 (MQ=255)
                                                                                                                                            ccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatt           >  2:3065564‑M1/1‑10 (MQ=255)
                                                                                                                                            ccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatt           >  1:3285667‑M1/1‑10 (MQ=255)
                                                                                                                                            ccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactaagccgccaacgtggaggcatcatgcaagaagacgaat           >  1:4581766‑M1/1‑10 (MQ=255)
                                                                                                                                            ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggttgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatt           <  1:4352422‑M2/150‑105 (MQ=255)
                                                                                                                                            ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatt           <  2:6555781‑M2/150‑105 (MQ=255)
                                                                                                                                            ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctg                                                                           >  2:5348246‑M2/1‑46 (MQ=255)
                                                                                                                                            ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggcg           >  1:5009139/1‑150 (MQ=255)
                                                                                                                                            ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggcg           >  1:5416576/1‑150 (MQ=255)
                                                                                                                                            ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggcg           >  2:1909681/1‑150 (MQ=255)
                                                                                                                                            ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggcg           >  1:2603365/1‑150 (MQ=255)
                                                                                                                                            ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATAAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggcg           >  2:4570430/1‑150 (MQ=255)
                                                                                                                                                tCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggttgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttc       <  1:6163668‑M2/150‑109 (MQ=255)
                                                                                                                                                 ccTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGc      >  2:5226212/1‑150 (MQ=255)
                                                                                                                                                  cTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttccc     >  2:930523‑M1/1‑4 (MQ=255)
                                                                                                                                                  cTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgccgacgtggaggcatcatgcaagacgacgatttttccc     >  1:20337‑M1/1‑4 (MQ=255)
                                                                                                                                                  cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaaga                   <  2:1988774‑M2/136‑97 (MQ=255)
                                                                                                                                                  cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCagccg     >  1:5825861/1‑146 (MQ=255)
                                                                                                                                                   tACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttccct    >  2:4185061‑M1/1‑3 (MQ=255)
                                                                                                                                                   tACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCgg    >  2:1324844/1‑150 (MQ=255)
                                                                                                                                                   tACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCgg    >  1:994879/1‑150 (MQ=255)
                                                                                                                                                    ccGGGGATGTCACAGAGCACGAAGACGGGGGGGTGCCTGTTGGCGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGa   <  2:2160223/149‑1 (MQ=255)
                                                                                                                                                    aCaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttccctg   >  1:4857683‑M1/1‑2 (MQ=255)
                                                                                                                                                     cGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttccctgt  <  1:2500271‑M2/150‑114 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGAT  >  NC_002947/2055438‑2055736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.