New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2104952 =79 (0.270)22 (0.090) 10/228 NT 22.4% intergenic (‑71/‑134) PP_1875/PP_1876 two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
?NC_002947 2105047 = 87 (0.360)intergenic (‑166/‑39) PP_1875/PP_1876 two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein

Only 100 of 209 total aligned reads displayed.

GCTTGTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGA  >  NC_002947/2104803‑2105101
                                                                                                                                                     |                                                                                                                                                      
gCTTGTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG                                                                                                                                                        >  1:1095923‑M1/1‑150 (MQ=255)
 ccagtgtggtgccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcgc                                                                                                                                                       >  1:5658952‑M1/149‑150 (MQ=255)
 ccagtgtggtgccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcgc                                                                                                                                                       >  1:2020500‑M1/149‑150 (MQ=255)
 cTTGTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGCCCCCGCTTGGC                                                                                                                                                       <  2:3630588‑M1/150‑1 (MQ=255)
 cTTGTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGCCCCCGCTTGGC                                                                                                                                                       <  1:1695292‑M1/150‑1 (MQ=255)
  ttGTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCG                                                                                                                                                      >  1:6829524‑M1/1‑150 (MQ=255)
   agtgtggtgcccgagtcgatgtgctggcgtggtgccggcaacaggtgttcacggcgcggcagtaccgattcggcgcggtccagtaaagcgatcaagcgagcgtccatgacgactcctaccactctcagttttttgggggcggctgcgcgc                                                                                                                                                     >  1:3506879‑M1/147‑150 (MQ=255)
   agtgtggtgccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcgcgc                                                                                                                                                     >  1:5236959‑M1/147‑150 (MQ=255)
     tgtggtgccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGccc                                                                                                                                                   <  1:5343163‑M1/6‑1 (MQ=255)
        ggtgccccagtcgatgtgcgggcgttgtgcaggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTc                                                                                                                                                >  1:1974796‑M1/142‑150 (MQ=255)
           gccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaatgcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgacccctaacaatctcagttttttgggggccgctgcGCGCCCCTCcgc                                                                                                                                             >  2:1318598‑M1/139‑150 (MQ=255)
           gccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCcgc                                                                                                                                             >  1:95248‑M1/139‑150 (MQ=255)
           cggCGTTTGGTTAATTTGATATCCTTGAGTCCCGTGCGGGTTTCCCGTTCCTTGCGCTGCGCAAGCTTAGCCGATTAGCCCCGGGTGGTGGTGGTTCTGTCTGTTAATTTCTGTTGATCGCCAAGGGGGGGCCGCTTGGCGCCCCTCcgc                                                                                                                                             <  1:3203528/149‑1 (MQ=255)
           aGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATGGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGC                                                                                                                                             >  2:5526526‑M1/1‑150 (MQ=255)
           aGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGC                                                                                                                                             >  2:3203528‑M1/1‑150 (MQ=255)
             gCGATTGGTGAACTTGATAGCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATCGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTGGATCGCCAAGGGGGGGCCGCTTGGCGCCCCTCCGCGG                                                                                                                                           <  2:1697886‑M1/150‑1 (MQ=255)
             cccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCgg                                                                                                                                           <  1:2157650‑M1/14‑1 (MQ=255)
             cccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCgg                                                                                                                                           >  1:5419832‑M1/137‑150 (MQ=255)
               gATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGC                                                                                                                                         <  2:4599977‑M1/150‑1 (MQ=255)
                   ggTGACCTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGC                                                                                                                                     <  2:1163001‑M1/150‑1 (MQ=255)
                    gTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCC                                                                                                                                    >  1:1263806‑M1/1‑150 (MQ=255)
                    gTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCAGAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCC                                                                                                                                    <  2:64458‑M1/150‑1 (MQ=255)
                        tgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTcc                                                                                                                                               >  1:4812206‑M1/126‑135 (MQ=255)
                        tgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTcc                                                                                                                                               <  2:4812206‑M1/10‑1 (MQ=255)
                        aCTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGct                                                                                                                                <  2:4517706‑M1/150‑3 (MQ=255)
                         cTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTc                                                                                                                               <  2:2721867/150‑1 (MQ=255)
                         cTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCGTGGCGCCCCTCCGCGGGGGTGCCCGgtg                                                                                                                               >  2:2489933‑M1/1‑147 (MQ=255)
                            gATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctccca                                                                                                                            <  2:4774439‑M1/150‑7 (MQ=255)
                            gATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCca                                                                                                                            <  2:1177191/150‑1 (MQ=255)
                              tatCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTTCCCCTTACcaca                                                                                                                          >  2:685850/1‑150 (MQ=255)
                              tatCCAGGAGTCCCGAGCCGGTTTCCCGGTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCcaca                                                                                                                          <  1:6227833/150‑1 (MQ=255)
                               ctCCATGAGTCCCGAGCCGGTGTCCCCCTCCTCGCGCAGCGCAAGCAGAGCCGCATAGCCCCGGCCGCTGGTGGGTCTGTCTGTTCATTACAGAGGATCGCCAAGCGGCGGCCGCTGGGCGCCCCTCCGCGGGCTTGCCCGTCCCcaccg                                                                                                                         <  2:1974659/149‑3 (MQ=255)
                                tCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAgg                                                                                                                        <  2:409589/150‑1 (MQ=255)
                                 ccATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCGTGCCCGTTCCCACAGGt                                                                                                                       >  2:6364258/1‑150 (MQ=255)
                                  gtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGcc                                                                                                                                    <  2:143619‑M1/21‑1 (MQ=255)
                                  cATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCGTGGCGCCCCTCCGCGGGCGGGCCCCGTCCcccacgga                                                                                                                      >  2:1863141/1‑146 (MQ=255)
                                   aTGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGCCCCCGCTTGGCGatc                                                                                                                                                   <  2:5476614‑M1/120‑4 (MQ=255)
                                        tCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgt                                                                                                                >  2:1541996‑M1/1‑132 (MQ=255)
                                         cccGAGCCGTTTTCCCGTTCCTTGCGCTGCGCAAGCATCGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCACGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTa                                                                                                               <  1:2476182/150‑1 (MQ=255)
                                           cGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgttca                                                                                                             <  2:4822646‑M1/150‑22 (MQ=255)
                                                 ggTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTTGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAgg                                                                                                       <  2:6792135/150‑1 (MQ=255)
                                                       ccGTTCCTTGCGCTGCGCAAGCATCGCCGAATAGCCCCGGCTGCTGGTGGGTCTTTCTGTTCATTTCAGTTGTTCGCCAAGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAAc                                                                                                <  1:3082699/150‑1 (MQ=255)
                                                         gTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTTCCCCTTCCCACAGGTACACCGTAGCCCCACGCGGAACGc                                                                                              >  2:6487131/1‑150 (MQ=255)
                                                           tCCTTGCGCTGCGCAAGCATCGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCaa                                                                                            <  1:6522081/150‑1 (MQ=255)
                                                             ccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGc                                                                                          >  1:5861389‑M1/89‑150 (MQ=255)
                                                              ttGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCATTCCCGGTCCCACAGGTACAGCTTAGCCCCAGGGAGAACGCAAGcc                                                                                         >  2:3975254/1‑150 (MQ=255)
                                                               tgcgctgcgcAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgttcagcctggggctaagctgtacc                                                                                         <  1:2686837‑M1/150‑42 (MQ=255)
                                                                 cgctgcgcAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCGTGCCCCTTCCCCCCGGTAAAGCGTAGCCCCCGGCGGAAACCAAGcccgg                                                                                      >  2:890868/1‑148 (MQ=255)
                                                                   ctgcgcAAGCAGAGCCGAATAGCCCCGGTTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                                    <  2:6017735/150‑1 (MQ=255)
                                                                   ccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                                    >  2:4702140‑M1/83‑150 (MQ=255)
                                                                   ccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                                    >  2:261991‑M1/83‑150 (MQ=255)
                                                                    tgcgcATTCATAGCCTTATAGCCCCTGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                                   <  2:3453565/150‑1 (MQ=39)
                                                                    ggcgcaAGCATAGCCGAATCGCCCCGGGTGCTGGTGGGTCTTTCTGTTCTTTTCATTTGATCGCCAAGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgttcagcctggggctaagctgtacctgtgg                                                                                    <  1:2400927‑M1/149‑47 (MQ=255)
                                                                    cgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                                   >  1:2271998‑M1/82‑150 (MQ=255)
                                                                    cgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                                   >  1:5957672‑M1/82‑150 (MQ=255)
                                                                    cgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                                   >  1:3777992‑M1/82‑150 (MQ=255)
                                                                    cgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                                   >  2:424291‑M1/82‑150 (MQ=255)
                                                                        catgcatAGCCGTATAGCCCCGGTTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgttcagcctggggctaagctgtccctgtgggaac                                                                                <  2:3376508‑M1/147‑51 (MQ=255)
                                                                        cAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTTTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGttcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaac                                                                                <  1:6034371‑M1/150‑51 (MQ=255)
                                                                        cAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGc                                                                               >  2:6635146‑M2/1‑149 (MQ=255)
                                                                         aaGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcg                                                                              >  2:2678489‑M2/1‑148 (MQ=255)
                                                                          ggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgcttgGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCgg                                                                             >  1:1350317‑M1/76‑150 (MQ=255)
                                                                          ggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCgg                                                                             >  2:5842774‑M1/76‑150 (MQ=255)
                                                                          ggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCgg                                                                             >  2:6677881‑M1/76‑150 (MQ=255)
                                                                          ggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCgg                                                                             >  2:2336263‑M1/76‑150 (MQ=255)
                                                                          aGCATCCCCGAATCGCCCCGGCTGCTGGGGGGTGTGTCTTTTAATTTCAGTTGATCGCCAAGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcgg                                                                             >  1:2449023‑M2/1‑147 (MQ=255)
                                                                          aGCATAGCCGAATCGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgg                                                                              <  1:33738‑M1/150‑53 (MQ=255)
                                                                          aGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCACGCGGGGGCCGCTGGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcgg                                                                             >  1:4663804‑M2/1‑147 (MQ=255)
                                                                          aGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgg                                                                              <  1:1541996‑M1/150‑53 (MQ=255)
                                                                          aGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgg                                                                              <  2:2813326‑M1/150‑53 (MQ=255)
                                                                          aGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcgg                                                                             >  2:3753366‑M2/1‑147 (MQ=255)
                                                                          aGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcgg                                                                             >  1:4353967‑M2/1‑147 (MQ=255)
                                                                           gCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGttcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacggg                                                                             <  1:5415900‑M1/150‑54 (MQ=255)
                                                                           gCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcggg                                                                            >  1:1591395‑M2/1‑146 (MQ=255)
                                                                            cATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTAATTTCAGTTGATCGCCAAGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggc                                                                            <  1:2522556‑M1/150‑55 (MQ=255)
                                                                             aTAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCACGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcgggca                                                                          >  2:6031349‑M2/1‑144 (MQ=255)
                                                                              tAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcgggcaa                                                                         >  2:6583477‑M2/1‑143 (MQ=255)
                                                                              cggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgcttgGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCaa                                                                         >  2:2585508‑M1/72‑150 (MQ=255)
                                                                                   gAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcgggcaagcccg                                                                    >  2:4325042‑M2/1‑138 (MQ=255)
                                                                                     atcgCCCGGGCTGCTGGTGGTTCTGTCTTTTCTTTTCTGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTGGCCCGTTCCCACAGTTACAGCTTAGCCCCAGGCTTAACGCAAGCCCTGTGGGAGCGGGCAAGCCcgcg                                                                  <  1:5116532/147‑1 (MQ=255)
                                                                                         ccccGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCGTGCCCCGTGCCCCAGGGTCAGCGGATCCCCCGGCGGGAACCCAACCCAGGGGGGGCGGGCCAGCCCCCGgggg                                                              >  1:2240073/1‑150 (MQ=255)
                                                                                         ccccGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCGCCGCGGGCGTGGCCGGTCCCCCCCGGACAGCTTTGCCCCCGGGGGAAAGCAAGCCCCGGGGGGGCGGGCCAGCCCGCGgggg                                                              >  1:532340/1‑150 (MQ=255)
                                                                                                tgctgGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGGTTTCCCGGTGCCACACGTAAAGCTTATCCCCCCGCGGAACCCCAGCCCCGGGGGCGCGGGCCACCCCCCggcgcggcgccc                                                       >  2:5343163/1‑148 (MQ=255)
                                                                                                       gggggtgtgtgtTCTTTTCTGTTGATGGCCATGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTGAGCCCCAGGCTGAACGCACGCCCTGTGGGAGCGGGCACGCCCGCGGAGGGGCGCGCAGCGGcc                                                <  2:5044854/145‑1 (MQ=38)
                                                                                                                 gtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGcgg                                                                             <  1:1878297‑M2/111‑4 (MQ=255)
                                                                                                                 gtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCACCGCGGGCGGGCCCCCTGCCCCAAGTACACCGTAGCCCCACGCGGCACCCCACCCCAGGGGGGGCCGGCCCCCCCCCCGGGGGGCGCCCCGCGGCCCCCCCAAAAc                                      >  2:3431704/1‑150 (MQ=255)
                                                                                                                  ttCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTa                                                                                                                      >  2:4380788/1‑70 (MQ=255)
                                                                                                                    cttttCCGTTGAGCCCCACGGGGGGGCCGCTTGGCGCCCCCCCGCGGGCGGGCCCGTTCCCACAGGAACCGCTTCGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTga                                   <  2:5582282/148‑1 (MQ=255)
                                                                                                                         cAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCACGCGGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAAATGAGATTg                              >  2:5029319/1‑150 (MQ=255)
                                                                                                                          aGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                                   >  1:4053379/1‑96 (MQ=255)
                                                                                                                          aGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                                   <  2:4053379/96‑1 (MQ=255)
                                                                                                                          aGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGC                                                                                                                                     <  1:2726464‑M1/47‑1 (MQ=255)
                                                                                                                           gtggATCGCAACGCGGGGGCCGCTGGGCGCCCCTCCGCGGGCTTGCCCGTGCCCACCGGTACCGCTTCGCCCCCGGCGGAACGCAAGCCCTGTGGGAGCGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGtt                            <  2:3858465/147‑1 (MQ=37)
                                                                                                                           gTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCACCGCGGGCGTTCCCCGTACCACAGGTACCCCGTATCCCCACCCAGAAACCAATCCCCGTGGGCGCGGGCAACCCCCCCGGCGGGCGCGCACCGGCCCCCAAAAAAAAgagaatttt                            >  2:6597813/1‑145 (MQ=255)
                                                                                                                                gcGCCAAGCGGCCCCCGCTTGGCGCCCCTCCGCGGGCGTGCCCGTTCCCACCGGTACAGCTTAGCCCCAGGCGGAAAGCAAGCCCGGGGGGGGCGGGCAAGCCCGCCGAGGGGCGCGCCGCGGCCCCCAAAAAACAGAGATTGTTAGGAg                       >  2:2157650/2‑150 (MQ=255)
                                                                                                                                    cAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCt                                                                                                    <  2:1565985/69‑1 (MQ=255)
                                                                                                                                    cAAGCGGGGGCCGCTTGGCGCCCCGCCCCGGGCGGGGCCCGTCCCCCACGGAAACCAGATCCCCACGCGGGACCCCAACCCCGTGGGGGCGGGGCAGCCCCCGGACGGGGGCGCCGCCGCCCCCCAAAAACAGGCAGTGTTTGGGgtcgg                   >  2:3011044/1‑149 (MQ=255)
                                                                                                                                           gggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACCGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGTGCGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAc            <  2:6829524/150‑1 (MQ=255)
                                                                                                                                           gggCCGCTTGGCGCCCCTCCGCGGGCGTGCCCGTTCCCACAGGTACAGCGTAGCCCCAGGCGGAACGCAAGCCCGGTGGGAGCGGGCCAGCCCGCGGGGGGGCGCGCAGCGGCCCCCCAAAAACTGAGAGGGGTAGGAGTCGTCATGGAc            >  2:6215625/1‑150 (MQ=255)
                                                                                                                                                gCTTGGCGCCCCTCCGCGGGCTTGCCCCTTCCCACAGGTACACCTTATCCCCACGCGGAACGCCATCCCGGGGGGGGCGGGCCACCCCCCCGCGGGGCGCGCCGCGGCCCCCACAAAACGGAGATTGTTGGGGGTCGTCATGGGcgcgcg       >  2:5185508/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GCTTGTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGA  >  NC_002947/2104803‑2105101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.