New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3952906 =101 (0.340)18 (0.080) 12/218 NT 16.7% coding (136/1797 nt) PP_3483 type II secretion system protein
?NC_002947 3952991 = 99 (0.420)coding (51/1797 nt) PP_3483 type II secretion system protein

Only 100 of 323 total aligned reads displayed.

GTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCG  >  NC_002947/3952757‑3953055
                                                                                                                                                     |                                                                                                                                                     
gTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTT                                                                                                                                                       <  2:5964678‑M1/150‑1 (MQ=255)
 tAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTC                                                                                                                                                      >  1:6256164‑M1/1‑150 (MQ=255)
 agggcccgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTc                                                                                                                                                      >  2:5256346‑M1/149‑150 (MQ=255)
    gcccgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTc                                                                                                                                                   >  1:3534326‑M1/146‑150 (MQ=255)
     gCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCG                                                                                                                                                  >  1:3891527‑M1/1‑150 (MQ=255)
       cgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTcgcg                                                                                                                                                <  1:6507181‑M1/8‑1 (MQ=255)
       aGGGTCAGGCCCAGGCGCCGGGCGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCG                                                                                                                                                >  2:4097720‑M1/1‑150 (MQ=255)
       aGGGTCAGGCCCAGGCGCCGGGCGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCG                                                                                                                                                >  2:3945723‑M1/1‑150 (MQ=255)
        gacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCgg                                                                                                                                               <  1:1223043‑M1/9‑1 (MQ=255)
        gacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCgg                                                                                                                                               >  2:5778792‑M1/142‑150 (MQ=255)
         ggTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGG                                                                                                                                              >  2:6245743‑M1/1‑150 (MQ=255)
           tCAGGCCCCGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCA                                                                                                                                            >  1:1897331‑M1/1‑150 (MQ=255)
           gacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCa                                                                                                                                            >  2:6579299‑M1/139‑150 (MQ=255)
              gatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGc                                                                                                                                         <  2:518237‑M1/15‑1 (MQ=255)
               gCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCC                                                                                                                                        >  2:1124971‑M1/1‑150 (MQ=255)
               gCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCC                                                                                                                                        >  2:1958041‑M1/1‑150 (MQ=255)
               gCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCC                                                                                                                                        >  1:590041‑M1/1‑150 (MQ=255)
                tcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcacccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGccc                                                                                                                                       <  2:2109823‑M1/17‑1 (MQ=255)
                tcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggactctgcaaagcctgcaccgacgTCTTCGCGGGCCTGccc                                                                                                                                       <  1:4691476‑M1/17‑1 (MQ=255)
                tcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGccc                                                                                                                                       >  1:4938780‑M1/134‑150 (MQ=255)
                 ccAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCG                                                                                                                                      >  1:1553499‑M1/1‑150 (MQ=255)
                  cAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGGTCCAGGCAGACGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCAGGGCCAGGAGGTCGCGGGGGTAGGCGGAAAATTTTGCTGGGTTCTTCGCGGGAAAGCCCGC                                                                                                                                     >  1:1593358‑M1/1‑150 (MQ=255)
                  aactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGc                                                                                                                                     <  2:3262244‑M1/19‑1 (MQ=255)
                  aactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGc                                                                                                                                     >  2:630224‑M1/132‑150 (MQ=255)
                    ctgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCcgcgc                                                                                                                                   <  2:44066‑M1/21‑3 (MQ=255)
                     tgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCCCTcc                                                                                                                                  <  1:1108156‑M1/22‑1 (MQ=255)
                     ggctcacaggggaagagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCccgcgaa                                                                                                                                  >  2:4180841‑M1/129‑147 (MQ=255)
                     gcgcCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCgaa                                                                                                                                  <  2:1562076‑M1/150‑4 (MQ=255)
                       ctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCca                                                                                                                                >  2:337936‑M1/127‑150 (MQ=255)
                        tcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCCCTCCcac                                                                                                                               <  2:6480688‑M1/25‑1 (MQ=255)
                        tcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcagtcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCcac                                                                                                                               <  2:5525255‑M1/25‑1 (MQ=255)
                         cacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCcaca                                                                                                                              >  1:4457836‑M1/125‑150 (MQ=255)
                         cGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACA                                                                                                                              <  2:2276782‑M1/150‑1 (MQ=255)
                         cGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACA                                                                                                                              <  2:5869541‑M1/150‑1 (MQ=255)
                         cGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACA                                                                                                                              <  2:4567037‑M1/150‑1 (MQ=255)
                          gggTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAG                                                                                                                             <  2:2655131‑M1/150‑1 (MQ=255)
                          acaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             >  1:5366590‑M1/124‑150 (MQ=255)
                          acaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             >  1:6819154‑M1/124‑150 (MQ=255)
                           caggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAgg                                                                                                                            >  1:4610975‑M1/123‑150 (MQ=255)
                                   tgtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcac                                                                                                                    >  2:5656453/1‑150 (MQ=255)
                                    gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTCGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                   <  1:2871354/150‑1 (MQ=255)
                                     tCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAg                                                                                                                  <  1:1927716/150‑1 (MQ=255)
                                     tCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAg                                                                                                                  <  2:2472991/150‑1 (MQ=255)
                                     gcGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAg                                                                                                                  <  2:1014136/149‑1 (MQ=255)
                                       gggggTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGGACATCACCGGt                                                                                                                >  1:906430/1‑150 (MQ=255)
                                        ggggTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCCCAggac                                                                                                               >  1:720347/1‑148 (MQ=255)
                                               cGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGc                                                                                                        <  2:332966/150‑1 (MQ=255)
                                                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCt                                                                                                       >  1:3275842/1‑150 (MQ=255)
                                                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCt                                                                                                       <  1:215859/150‑1 (MQ=255)
                                                 cccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCACGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTg                                                                                                      >  2:768952‑M1/101‑150 (MQ=255)
                                                     ccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATa                                                                                                  <  2:3519151/150‑1 (MQ=255)
                                                      caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCACAGGTCTGTGGGCTGCATAc                                                                                                 >  2:969000/1‑150 (MQ=255)
                                                       aggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACCTCACAGGTCTGGGGGCTGCATACa                                                                                                >  2:2347726/1‑150 (MQ=255)
                                                        ggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACAt                                                                                               <  1:5275491/150‑1 (MQ=255)
                                                         gCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                              >  2:3891527‑M2/1‑149 (MQ=255)
                                                           gTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcct                                                                                            >  1:2606163‑M2/1‑147 (MQ=255)
                                                            ttCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctg                                                                                           >  1:5199442‑M2/1‑146 (MQ=255)
                                                             tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                          >  1:6704818‑M2/1‑145 (MQ=255)
                                                               cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgg                                                                                        <  2:3659749‑M1/150‑37 (MQ=255)
                                                               cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgg                                                                                        >  2:6381289‑M2/1‑143 (MQ=255)
                                                               cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGATTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgg                                                                                        <  1:5048621‑M1/150‑37 (MQ=255)
                                                               agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                        >  1:1788883‑M1/87‑150 (MQ=255)
                                                                 ggCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtggga                                                                                      >  1:2510165‑M2/1‑141 (MQ=255)
                                                                 cctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                      >  2:1705072‑M1/85‑150 (MQ=255)
                                                                    aGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACCGGTCTGTGGGCTGCATACATcctgtgggagcg                                                                                   <  1:5009353‑M2/150‑13 (MQ=255)
                                                                     gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgg                                                                                  <  1:6642145‑M1/150‑43 (MQ=255)
                                                                     gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                  >  1:134605‑M2/1‑137 (MQ=255)
                                                                     cgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  >  1:4339007‑M1/81‑150 (MQ=255)
                                                                      tCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcggg                                                                                 >  1:3168023‑M2/1‑136 (MQ=255)
                                                                       acgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGc                                                                                >  2:4701772‑M1/79‑150 (MQ=255)
                                                                        gAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCACAGGTCGGGGGGCTGCATACATcgggtgggagcgggcg                                                                               <  1:5525255‑M2/150‑17 (MQ=255)
                                                                         aGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcat                                                                              >  1:5737424‑M2/1‑133 (MQ=255)
                                                                           cAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTCGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgc                                                                            >  1:208048‑M2/1‑131 (MQ=255)
                                                                           cAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgc                                                                            <  1:3871234‑M1/150‑49 (MQ=255)
                                                                            aGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCGGTGGGCTGCATTCATcctgtgggagcgggcctgcc                                                                           <  2:4893853‑M2/150‑21 (MQ=255)
                                                                             ggCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgggggagcgggcatgccc                                                                          <  2:4289607‑M2/150‑22 (MQ=255)
                                                                                 gtcGTCTGTGGCTTGCTGTGGGGCGTGGGCCCGGAGGTCGGGGGGGTAGGCGGTTTTTTTTGCTGGGTTCTTCGGGGGCTTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcgtgtgggagcgggcatgcccgcga                                                                      >  1:6449365‑M2/2‑125 (MQ=255)
                                                                                  tCGTCTGTGGCTTGCAGTGGGGCCTGGGCCTGGAGGTCGGGGGGTTTGGCGTAAATTTTTGCTGGTTTGTTCGCGGCCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaa                                                                     >  2:4342866‑M2/1‑124 (MQ=255)
                                                                                  gggtcTGTGGGTGGGAGACGGGCGTGGGCCCGGCGGTCGCGGGGGTCGGCGGAAATTTTGGCTGGGTTCTTCGCGGGCTTGCCCGCTCCCACTGTTACATCACTGGTCTGTGGGCTGCATACATcctgtgggagcgggcttgcccgcgaa                                                                     >  2:3008607‑M2/3‑124 (MQ=255)
                                                                                      cAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCGGTGGGCGGCATAAATcctgtgggagcgggcctgcccgcgccgaag                                                                 <  1:101051‑M2/150‑31 (MQ=255)
                                                                                             ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCCCAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGc                                                          >  2:1508306/1‑150 (MQ=255)
                                                                                             ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACCGGTCCCTCCCAGGGCGGGGGGCGGCCTACATCCGGTGGGTGCGGGGCTTCCCGCGCGGACGTCGGGGc                                                          >  1:3068126/1‑150 (MQ=255)
                                                                                               gCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCACAGGTCTGTGGGCTGCATACATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAg                                                        >  2:1998290/1‑150 (MQ=255)
                                                                                               gCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGGTGCATAGATCCGGTGGGAGCGGGGATGACCGCGCCGACGTCGGTGCAg                                                        >  1:4293360/1‑150 (MQ=39)
                                                                                                 aGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGc                                                      >  2:4225427/1‑150 (MQ=255)
                                                                                                  gACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCGGTGGGCAGCATACAACCTGTGGGAGCGGGCAAGCCCGCGAAGAAGTCGGTGCAGGCt                                                     >  2:1308391/1‑150 (MQ=39)
                                                                                                      ggCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCAGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGc                                                 <  2:1800248/150‑1 (MQ=255)
                                                                                                             gCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCGTTGCAGATTcc                                          >  2:5415140/1‑150 (MQ=255)
                                                                                                              ccAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgg                                                                                        <  2:468643‑M1/103‑37 (MQ=255)
                                                                                                               cAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtg                                                                                         >  2:4315975‑M2/1‑95 (MQ=255)
                                                                                                                   tggTCGCGGGGGTTGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCATCACCGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGtt                                    <  2:1057387/149‑1 (MQ=255)
                                                                                                                    gggcgcgGGGGTCGGGGGACATGTGGGCGGGGGGGTGCGCGGGCAGGCCCGCGCCCCCGGGTCCCGCCCCGGGCTGTGGGCTGCCCCCCGCCGGTGGGCGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTg                                   <  2:1197052/147‑1 (MQ=255)
                                                                                                                     gTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGACGACGTCGGTGCAGGCTTTGCTGATTCCGGGGTTGc                                  >  2:6823850/1‑150 (MQ=255)
                                                                                                                            gggTAGGCGGAAATTTTGGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAATCACAGGTCTGGGGGCTGCATACCTCCTTTGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAAt                           <  2:1469034/150‑1 (MQ=39)
                                                                                                                               tAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATAACAGGTCTGTGGGCTGCATACATCCTGAGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGAGTCCGGGGTTGCATCGAATGCt                        >  2:2750516/1‑150 (MQ=255)
                                                                                                                                   cGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCAAGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTg                    >  2:5734677/1‑150 (MQ=255)
                                                                                                                                           tttGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACCGGTCTGTGGGCAGCATAAAAAATGTGGGAGCGGGCAAGACCGCGAAGAAGTCGGTGCAGGCGTTGCAGATTCAGGGGTTGCATCGTCTGCTTCTGGCATGGcc            >  1:2120124/1‑150 (MQ=255)
                                                                                                                                            tgggggggTTCTGCGCGGCCCGCCCCGCCCCCACTGGTACACCCCTGGTCTGGGGGCTGCAACCATCCGGGGGGACCGGCCAGGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCt           <  1:4097720/145‑1 (MQ=255)
                                                                                                                                            gggCTGGGTTCTTCGGGGGCCTGCCCGCCCCCACCGGTACATCACCGGTCTGTGGGCTGCATACATCCTGTGGGACCGGGCAGGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCt           <  1:3945723/148‑1 (MQ=255)
                                                                                                                                                  gtttcttcGGGGGTATGCCCGCTCCCACTGTTAAACCACAGGTCTGTGGGCTGAATACAACCTGTGGTAGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACt     <  2:2266670/148‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCG  >  NC_002947/3952757‑3953055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.