New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 3956090103 (0.350)12 (0.050) 5/218 NT 10.5% intergenic (‑61/+134) PP_3486/PP_3487 cytochrome c/hypothetical protein
?NC_002947 = 3956150 122 (0.520)intergenic (‑121/+74) PP_3486/PP_3487 cytochrome c/hypothetical protein

Only 100 of 185 total aligned reads displayed.

CTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGC  >  NC_002947/3955941‑3956239
                                                                                                                                                     |                                                                                                                                                     
 tACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAggg                                                                                                                                                      <  2:6089423/150‑1 (MQ=255)
 tACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAggg                                                                                                                                                      <  1:3492496/150‑1 (MQ=255)
   cTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCt                                                                                                                                                    <  1:4035564/150‑1 (MQ=255)
   cTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTAGGGTCGCGGAAGGGCt                                                                                                                                                    >  2:6743876/1‑150 (MQ=255)
    tGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTGCGTCGCGGAAGGGcag                                                                                                                                                   >  2:2205231/1‑148 (MQ=255)
        gaCGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgca                                                                                                                                               <  2:6402497/150‑1 (MQ=255)
        gaCGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgca                                                                                                                                               <  2:4342236/150‑1 (MQ=255)
         aCGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcag                                                                                                                                              <  1:6805057/150‑1 (MQ=255)
           gCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcagca                                                                                                                                            <  1:3130568/150‑1 (MQ=255)
           gCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcagca                                                                                                                                            <  2:2314029/150‑1 (MQ=255)
           gCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcagca                                                                                                                                            <  1:3129901/150‑1 (MQ=255)
           gCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTGCGTCGGGACAGGGGTGAgcagca                                                                                                                                            >  2:5093158/1‑150 (MQ=255)
           gCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGAGCGGCGCGCCAGGGGGGCgcagca                                                                                                                                            >  2:6358390/1‑150 (MQ=255)
               tCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTGCGGCGCGGAACGGCGGCGCAGCAcccc                                                                                                                                        >  2:2131180/1‑150 (MQ=255)
                 gcgGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCg                                                                                                                                      <  2:5860241/150‑1 (MQ=255)
                  cgGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCgg                                                                                                                                     <  2:6763379/150‑1 (MQ=255)
                  cgGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCgg                                                                                                                                     <  1:3662505/150‑1 (MQ=255)
                   ggTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCTGCGCAGccctttc                                                                                                                                    <  1:2380321/150‑5 (MQ=255)
                     tAAAGGGTTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCTGGGCCAGGGCTGAGTTCTAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGTGCGGCCTTGCGTCGCTAAAGGGCTGCGCAGCAGCCCCGGCAg                                                                                                                                  <  1:4462458/150‑1 (MQ=255)
                     tAAAGGCGTTGGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAg                                                                                                                                  <  2:4423236/150‑1 (MQ=255)
                        aGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTgg                                                                                                                               <  2:4789880/150‑1 (MQ=255)
                         ggCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTGGGGCGCGGAAGGGCTGCGCCCCAGCCCCCGCacgggg                                                                                                                              >  2:5258087/1‑145 (MQ=255)
                          gCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCa                                                                                                                             <  2:6015435/150‑1 (MQ=255)
                                gCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCaa                                                                                                                       <  2:2490660/150‑1 (MQ=255)
                                 ccTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAg                                                                                                                      <  2:3264270/150‑1 (MQ=255)
                                  cTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAgc                                                                                                                     <  1:3344461/150‑1 (MQ=255)
                                     cTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCa                                                                                                                  <  1:4938775/150‑1 (MQ=255)
                                     cTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCa                                                                                                                  <  2:1769015/150‑1 (MQ=255)
                                       tGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCGGTGCGTCGCGTCAGGGCTGCGCCCCACCCCCCCCCCGGGCCGCTCAACCGCacc                                                                                                                >  2:3709541/1‑148 (MQ=255)
                                         ttCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGaaa                                                                                                              <  2:3101298/150‑1 (MQ=255)
                                         ttCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGaaa                                                                                                              <  2:5538093/150‑1 (MQ=255)
                                            gTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAagag                                                                                                           <  2:2733715/150‑1 (MQ=255)
                                            gTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAagag                                                                                                           <  2:1809943/150‑1 (MQ=255)
                                            gTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAagag                                                                                                           <  1:5662627/150‑1 (MQ=255)
                                              ggtcgttcAGGTCCTGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCAATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAggg                                                                                                         <  1:6501304/150‑1 (MQ=255)
                                              ggtcggtcAGGTCCAGGGCCTGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAggg                                                                                                         <  1:1671343/150‑1 (MQ=255)
                                              ggtcggtcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCGGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAggg                                                                                                         <  1:4386358/150‑1 (MQ=255)
                                              ggtcggtcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAggg                                                                                                         <  2:6266867/150‑1 (MQ=255)
                                              ggtcggtcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAggg                                                                                                         <  2:727504/150‑1 (MQ=255)
                                              ggtcggtcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAggg                                                                                                         <  1:1080908/150‑1 (MQ=255)
                                               gtcggtcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAgggg                                                                                                        <  2:3071878/150‑1 (MQ=255)
                                                tcggtcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTTCGTCGCGGCAGGGCTGCGCCGCACCCCCCCCCGTGGCAGCGCCAGCGCCCGAAGAggggg                                                                                                       >  2:1517986/1‑149 (MQ=255)
                                                    tcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCAAGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGAGGCCAGTCGGCGCGAAACGGCAGCCCAGCAGCCCCCCCACTGGCACCGCAAACGCAAAAAGAGGGGAgcgc                                                                                                   >  2:1632821/1‑150 (MQ=255)
                                                           cagggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccgggggggctgcgccg                                                                                            >  1:5170705‑M1/1‑91 (MQ=255)
                                                           cagggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcag                                                                                            >  1:1006896‑M1/1‑91 (MQ=255)
                                                           cagggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTgcgcgc                                                                                            <  2:4569654/150‑1 (MQ=255)
                                                            agggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCt                                                                                           <  2:5971765/150‑1 (MQ=255)
                                                            agggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCt                                                                                           <  2:5076927/150‑1 (MQ=255)
                                                             gggCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTc                                                                                          >  2:6418592‑M2/1‑149 (MQ=255)
                                                              ggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccc                                                                                         <  1:1562712‑M1/150‑63 (MQ=255)
                                                              ggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccc                                                                                         <  2:306291‑M1/150‑63 (MQ=255)
                                                              ggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccc                                                                                         <  1:2652451‑M1/150‑63 (MQ=255)
                                                               gccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTTCGGCGCGGAAGGGGGGCGCAGCAGCCCCCGCCGGGGCCACGCAAGCCCAGAAAGAGGGGGGCGCTGCGCGCGccc                                                                                        >  2:4362034/1‑149 (MQ=255)
                                                                 cAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTccttt                                                                                      >  2:78972‑M2/1‑145 (MQ=255)
                                                                  aGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttc                                                                                     >  1:3789037‑M2/1‑144 (MQ=255)
                                                                   gggCTGAGGTCGAAGTTGCCAGGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcg                                                                                    >  2:2591039‑M2/1‑143 (MQ=255)
                                                                    ggCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgc                                                                                   >  1:4940895‑M2/1‑142 (MQ=255)
                                                                    ggCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgc                                                                                   >  1:1861039‑M2/1‑142 (MQ=255)
                                                                    ggCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgc                                                                                   >  1:3508684‑M2/1‑142 (MQ=255)
                                                                     gcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcg                                                                                  <  2:2575454‑M1/150‑70 (MQ=255)
                                                                       tGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgac                                                                                <  1:3434716‑M1/150‑72 (MQ=255)
                                                                       tGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgac                                                                                <  1:3465031‑M1/150‑72 (MQ=255)
                                                                       tGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgac                                                                                <  1:1409035‑M1/150‑72 (MQ=255)
                                                                            tCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaag                                                                           >  1:3808996‑M2/1‑134 (MQ=255)
                                                                            tCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCACAAGCGCCGCAAGAGGGGAGCGCAGCGCGCAccggtcgccacgcaag                                                                           <  2:3951517‑M2/150‑17 (MQ=255)
                                                                              gAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgc                                                                              <  2:3444957‑M2/145‑14 (MQ=255)
                                                                                 gTTGCCAGGCCACGCACGCAGGTCAGCCAGAGCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAACGGGCGGCGCAGCAGCCCCGGCAGTGGCAGCTCACGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgc                                                                      >  2:4701373‑M2/1‑129 (MQ=255)
                                                                                         gccaAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccagggctgcgcagcagcccc                                                                                        <  1:1029533‑M1/124‑64 (MQ=255)
                                                                                             aGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAgtg                                                                                                                    >  1:6751134/1‑90 (MQ=255)
                                                                                                 cccctgTACGCCATATCCCCCGCCGTGTGGGAGCGGCCTGGCGTCGCTATCGGGCTGCGCCGCCCCCCGGGGTTTGGCAGCTCCCGCGCACATAGCGGGGAGCGGTGCGCGCTCCTTTCGCGCCGCACGGCCGCTCCCACAAAAGCGGAt                                                      <  2:3868787/145‑1 (MQ=255)
                                                                                                                  gCAAGCCCTGTGGGAGCGGGCGTTCGGCGCGGAAAGGCGGCGCACCACCCCCCCCACTGGGCGCGCAAACGCACAAACAGGGGCGCGCGGCGCGCCCCCTTCGCGCCGCACCCCCGCGCCCCCCAAACCCGATGCCCCACCGGcccaaaa                                     >  2:4134085/1‑145 (MQ=255)
                                                                                                                     cgCCCTGGGGGAGCGGCCTTGCGCCGCCACCGGGCGGCGCCGCAGCCCCGGCCGTGGCAGCCCAAGCGCCCAACGAGGGGAGCGCGGCGCGCACCTTCCGCGCCGCACGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTcccc                                  <  2:2809130/149‑1 (MQ=255)
                                                                                                                                     ctttgcGTCGCTACCGGcgcgcgctgcgctcccctctttctgcgcttgcgcggccacggggggggctgcggcgcagcccttccgcgacgcacggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcg                  <  2:5074573‑M1/148‑134 (MQ=255)
                                                                                                                                     ccTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcg                  >  2:6260379‑M1/1‑17 (MQ=255)
                                                                                                                                     ccTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTTCCCAGGCGGCCCATGATAc                  >  2:2650004/1‑150 (MQ=255)
                                                                                                                                     ccTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATAc                  >  1:2690255/1‑150 (MQ=255)
                                                                                                                                      cTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttagcgacgcaatgccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcga                 >  1:3090891‑M1/1‑16 (MQ=255)
                                                                                                                                      cTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACt                 >  2:1290819/1‑150 (MQ=255)
                                                                                                                                         gCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttc                   >  1:3444957‑M1/1‑13 (MQ=255)
                                                                                                                                         gCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCac              >  1:4014683/1‑150 (MQ=255)
                                                                                                                                           gTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctca            >  2:3246078‑M1/1‑11 (MQ=255)
                                                                                                                                           gTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctca            >  2:6262520‑M1/1‑11 (MQ=255)
                                                                                                                                           gTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctca            >  2:3246148‑M1/1‑11 (MQ=255)
                                                                                                                                           gTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctca            <  1:22006‑M2/150‑80 (MQ=255)
                                                                                                                                           gTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccg            >  1:871168/1‑150 (MQ=255)
                                                                                                                                            gcgcgAGGGGGCGGCGCCGCCCCCCGGGCTGTGCCCGCTCACGCGCTGAATGTGGGGCGCGGGGGGGGCGCCTTGGGCGCCGCCGGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccga           <  2:3601712/149‑1 (MQ=255)
                                                                                                                                             cgcgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagc          <  2:2575454‑M2/150‑82 (MQ=255)
                                                                                                                                              gcgAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgtcgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagcc         >  1:3508964‑M1/1‑8 (MQ=255)
                                                                                                                                              gcgAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagcc         >  1:1861039‑M1/1‑8 (MQ=255)
                                                                                                                                                gAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccct       >  1:4428882‑M1/1‑6 (MQ=255)
                                                                                                                                                gAAAGGagcgcgcagcgctcccctctttctgagcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccct       >  2:945497‑M1/1‑6 (MQ=255)
                                                                                                                                                gAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCgg       >  1:3559655/1‑150 (MQ=255)
                                                                                                                                                gAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCgg       >  2:4119568/1‑150 (MQ=255)
                                                                                                                                                gAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAAGTCCCCAGGCGGCCCATGATACTCACCGACCgg       >  2:6436989/1‑150 (MQ=255)
                                                                                                                                                 aaaGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGc      >  1:4848792/1‑150 (MQ=255)
                                                                                                                                                   ggggcTGCTGCGCAGCCCTGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggc                              >  2:1029533‑M2/2‑63 (MQ=255)
                                                                                                                                                   ggggCTGCTGCGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCCCCGACCGGccc    >  2:1934176/2‑149 (MQ=255)
                                                                                                                                                     ggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGc  >  1:5482965/1‑150 (MQ=255)
                                                                                                                                                     ggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGc  >  1:6183276/1‑150 (MQ=255)
                                                                                                                                                     ggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGc  >  2:3777718/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGC  >  NC_002947/3955941‑3956239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.