New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4164062 =112 (0.380)39 (0.150) 18/248 NT 23.8% intergenic (+17/‑192) PP_3661/PP_3662 membrane protein/hypothetical protein
?NC_002947 4164150 = 149 (0.560)intergenic (+105/‑104) PP_3661/PP_3662 membrane protein/hypothetical protein

Only 100 of 275 total aligned reads displayed.

GGCATGGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATG  >  NC_002947/4163914‑4164209
                                                                                                                                                    |                                                                                                                                                    
 ctttggggctgacggatgcattgatgacatggcgttgaggcatctaagtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcctg                                                                                                                                                    >  2:1083977‑M1/148‑150 (MQ=255)
 ctttggggctgacggatgcattgatgacatggcgttgaggcatctaagtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggccgtgaaaaaccttgagaccgagctgcctg                                                                                                                                                    <  1:1600143‑M1/3‑1 (MQ=255)
   ttggggctgacggatgcattgatgacatggcgttgaggcatctaagtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCt                                                                                                                                                  >  2:1766631‑M1/146‑150 (MQ=255)
   aTGGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGACGCTGTTGGGCTGACTGGAGACCGAGTCGggtgga                                                                                                                                                  >  2:4881939/1‑148 (MQ=255)
   aTGGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGgctgct                                                                                                                                                  <  1:2914183/150‑1 (MQ=255)
        gctgacggatgcattgatgacctggcgttgcggcatctaagtctttcctgtgcgggtacaacatccttctttgacaccaccataccgagaactgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTcgcg                                                                                                                                            >  2:5530746‑M1/141‑150 (MQ=255)
        gctgacggatgcattgatgacatggcgttgaggcatctaagtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTcgcg                                                                                                                                            <  2:2796410‑M1/10‑1 (MQ=255)
         aCCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCgg                                                                                                                                           <  1:1150485/150‑1 (MQ=255)
          tgacggatgcagtgatgacatggcgttgaggcatctcagtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCggg                                                                                                                                          >  2:6750115‑M1/139‑150 (MQ=255)
                 cAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCC                                                                                                                                   <  1:3947407‑M1/150‑1 (MQ=255)
                  gcattgatgacatggcgttgaggcatctaagtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCg                                                                                                                                  >  2:223040‑M1/131‑150 (MQ=255)
                   gCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGC                                                                                                                                 <  1:5526323‑M1/150‑1 (MQ=255)
                    ccAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCT                                                                                                                                <  1:4531669‑M1/150‑1 (MQ=255)
                     cAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTC                                                                                                                               <  2:1485543‑M1/150‑1 (MQ=255)
                      aGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTTTACCCGCgaa                                                                                                                              <  2:5657080‑M1/150‑4 (MQ=255)
                       gATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTGGCGGGGAAAACCccaccg                                                                                                                             >  2:1942017‑M1/1‑144 (MQ=255)
                       gATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAAACCGCGCCa                                                                                                                             >  2:5153215‑M1/1‑149 (MQ=255)
                          tCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACA                                                                                                                          <  1:6115156‑M1/150‑1 (MQ=255)
                          tCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACA                                                                                                                          <  2:1029741‑M1/150‑1 (MQ=255)
                               ggcgttgaggcatctaagtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaacctggagaccgagtcggCTGCTTCGCGGGTAAACCCGCTCCTACAggtgg                                                                                                                     >  2:1966267‑M1/118‑150 (MQ=255)
                               aGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAggtgg                                                                                                                     <  1:4720235/150‑1 (MQ=255)
                                ggCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTACAGGggcc                                                                                                                    <  2:3815258‑M1/150‑5 (MQ=255)
                                      gCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGtgctgc                                                                                                              <  2:3752542/150‑1 (MQ=255)
                                         aCGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCt                                                                                                           <  1:2388333/150‑1 (MQ=255)
                                          atctaagtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTg                                                                                                          <  1:4045439‑M1/44‑1 (MQ=255)
                                            ggCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGaa                                                                                                        <  1:3794834/150‑1 (MQ=255)
                                            ggCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGggccttgccgtcttca                                                                                                        <  2:6588738‑M1/150‑17 (MQ=255)
                                            ggCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGggccttgccgtcttca                                                                                                        <  2:5468800‑M1/150‑17 (MQ=255)
                                            ggCGCTGGCCACCGGTGCGATCCTAAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGaa                                                                                                        <  1:6280413/150‑1 (MQ=255)
                                               agtctttcctgtgcgggtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctggCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGAc                                                                                                     >  2:6357016‑M1/102‑150 (MQ=255)
                                                 tGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGggccttgccgtcttcagggca                                                                                                   <  1:5986560‑M1/150‑22 (MQ=255)
                                                   gCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACA                                                                                                                          <  2:4971459‑M1/125‑1 (MQ=255)
                                                    ccACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCaa                                                                                                <  1:1548239/150‑1 (MQ=255)
                                                       ccGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGc                                                                                             <  2:5768779/150‑1 (MQ=255)
                                                       ccGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGc                                                                                             <  2:798857/150‑1 (MQ=255)
                                                           tGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcct                                                                                         >  1:1479454‑M2/1‑147 (MQ=255)
                                                             gggtaaataatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaacctgtagaccgagtcggCTGCTTCGCTGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGTAGACGGCAAGGCCCCTGt                                                                                       >  1:6158822‑M1/88‑150 (MQ=255)
                                                              gATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCGGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGCAGACGGCAAGGCCcctgta                                                                                      >  2:5210279‑M2/1‑144 (MQ=255)
                                                               gtaaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAg                                                                                     >  1:6374682‑M1/86‑150 (MQ=255)
                                                               aTCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGTTGAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtag                                                                                     <  1:1516134‑M1/150‑36 (MQ=255)
                                                               aTCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtag                                                                                     <  2:3502101‑M1/150‑36 (MQ=255)
                                                               aTCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgtag                                                                                     >  2:6432776‑M2/1‑143 (MQ=255)
                                                                tCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtagg                                                                                    <  1:5801047‑M1/150‑37 (MQ=255)
                                                                tCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgtagg                                                                                    >  1:2006660‑M2/1‑142 (MQ=255)
                                                                 ccTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtagga                                                                                   <  1:1016144‑M1/150‑38 (MQ=255)
                                                                 ccTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgtagga                                                                                   >  1:433684‑M2/1‑141 (MQ=255)
                                                                 aaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGa                                                                                   >  2:138087‑M1/84‑150 (MQ=255)
                                                                 aaaacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGa                                                                                   >  1:1864134‑M1/84‑150 (MQ=255)
                                                                   tCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGGTGGGTGGCGGGGAAAACCCCACCAAAAGGTGGGGGGTGGCCAGTATAAGGCCAGGCCCCGGGAGGAGc                                                                                 >  2:2907759/1‑150 (MQ=255)
                                                                   tCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtaggagc                                                                                 <  2:2346108‑M1/150‑40 (MQ=255)
                                                                   tCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgtaggagc                                                                                 >  1:1248829‑M2/1‑139 (MQ=255)
                                                                   tCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCGTAGCGGGGAAAAACCCGCCCACAGGGGGGTGGTGCCCAGAAGAAGGCAACGCCCCACGAGGAGc                                                                                 >  2:5824630/1‑150 (MQ=255)
                                                                   tCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCGGCTTCGCCGGTGAAACCCCACCCAAAAGTGGGGGGGGGCCGGAAGAAGGCCAGGCCCCAGGAGGGGc                                                                                 >  1:2796410/1‑150 (MQ=255)
                                                                   aacatccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGc                                                                                 >  1:1696640‑M1/82‑150 (MQ=255)
                                                                     aaCCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtaggagcgg                                                                               <  1:6790077‑M1/150‑42 (MQ=255)
                                                                     aaCCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgtaggagcgg                                                                               >  1:6538812‑M2/1‑137 (MQ=255)
                                                                     aaCCTGTGGCTGGGTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtaggagcgg                                                                               <  1:5350130‑M1/150‑42 (MQ=255)
                                                                      aCCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgtaggagcggg                                                                              >  1:971441‑M2/1‑136 (MQ=255)
                                                                      aCCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgtaggagcggg                                                                              >  2:136464‑M2/1‑136 (MQ=255)
                                                                      aCCGGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgtaggagcggg                                                                              >  2:3677744‑M2/1‑136 (MQ=255)
                                                                       tccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTGAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGt                                                                             >  1:1363252‑M1/78‑150 (MQ=255)
                                                                       tccttctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGt                                                                             >  1:510285‑M1/78‑150 (MQ=255)
                                                                           tctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCAc                                                                         >  2:5912190‑M1/74‑150 (MQ=255)
                                                                           tctttgacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaacctggagaccgagtcggCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCAc                                                                         >  2:2317994‑M1/74‑150 (MQ=255)
                                                                               tGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCcgc                                                                     <  1:3154769/150‑1 (MQ=255)
                                                                                gacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCgg                                                                               <  2:2223846‑M1/71‑1 (MQ=255)
                                                                                gacaccaccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCgg                                                                               >  1:2223846‑M1/69‑139 (MQ=255)
                                                                                  ttGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaa                                                                  <  1:3565474‑M1/150‑55 (MQ=255)
                                                                                  ttGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGaa                                                                  <  1:4431366/150‑1 (MQ=255)
                                                                                      gggggggCTGGCGATTACGCTGGGGGTGCAGACGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGGGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcag                                                              <  1:2464215/149‑1 (MQ=255)
                                                                                      cGGGGGGCTGGCGATTACCCTGGGGGTGCAGTAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGGTTCGCGGGTAAACCCGCTCCTCCAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcag                                                              <  2:2143459/150‑1 (MQ=255)
                                                                                       ggggggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcagg                                                             <  2:5275735/150‑1 (MQ=255)
                                                                                        gggggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagcc                                                            <  1:2195337‑M1/150‑61 (MQ=255)
                                                                                            gCTGGCGATTACCCTGGGGGTGCTGTAGCTGTTGGGCTGACGGGAGACCGTGTCGGCTGATTCGCGGGTAACCCCGCTCCTACCGGTGGGTGCTGCCCTGAAGACGGCACGGCCCCTGTTGGTGCGGGTTCACCCGCTAAGCAGGCAGCt                                                        <  1:5192708/150‑1 (MQ=255)
                                                                                             cgagaaatgtggacggcaacgaggggggctgtgaaaaacctggagaccgagtcggCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTc                                                       >  1:5707957‑M1/56‑150 (MQ=255)
                                                                                             cTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAACCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTc                                                       <  1:3385290/150‑1 (MQ=255)
                                                                                              tGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCg                                                      <  1:4982549/150‑1 (MQ=255)
                                                                                              gagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGt                                                                                                                                         <  1:1399471‑M1/13‑1 (MQ=255)
                                                                                                 cGATTACCCTGGGGGTGCAGAAGCTGTTGGGCGGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGtc                                                   <  2:1823883/150‑1 (MQ=255)
                                                                                                   aTTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCGGCCCTGAAGACGGCACGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGtctc                                                 <  2:3972413/150‑1 (MQ=255)
                                                                                                    ttACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACAGAGTCGGGGGCTTCGCCGGGGAAACCCCCCCGACACGTGGGGGGGGGCCGGAAGACGGCAAGGCCCCCGGGGGAGCGGGGTGACCCCCCAAGCACGCCGCTccggggga                                                >  2:1199445/1‑143 (MQ=255)
                                                                                                     ggggacggcaacgtggggggctgtgaaaaaccttgagaccgagtcggCTGCTTCGCGGGTAAACCCGCTCCTACCGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCGTGTTGGAGCGGGTTCACCCGCGAAGCAGGCAGCTTGGTCTCaa                                               >  1:832097‑M1/48‑150 (MQ=255)
                                                                                                      tggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTGAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCgg                                                                               >  2:369493‑M1/47‑117 (MQ=255)
                                                                                                             gggTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTCTTTc                                       <  2:1637440/150‑1 (MQ=255)
                                                                                                                tGCATAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTcaca                                    <  1:426969/150‑1 (MQ=255)
                                                                                                                tGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTcaca                                    <  1:6210568/150‑1 (MQ=255)
                                                                                                                   aGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGcc                                 <  2:3453165/150‑1 (MQ=255)
                                                                                                                           ttGGGCTGACTGGAGACCGAGTCGGGTGCGTGGCGGGTTAACCCCCGCCGACAGGTGGGTGCTGGCCGGTAGACGGCCAGGCCCCCGGAGGTGGGGGTTGACCCCCGAAGCAGGCACCTCGGTCAGAAGGGTTTTATAAGccccccacca                         >  2:726061/1‑146 (MQ=255)
                                                                                                                            tGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGTTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGCGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGtt                        <  1:3675101/150‑1 (MQ=255)
                                                                                                                            tGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAACCCCGCTCCTACTGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGGGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGtt                        <  1:700795/150‑1 (MQ=255)
                                                                                                                             gggCTGACTGGAGACCGAGTCGGCTGCGTCGCGGGTAAACCCGCTCCTCCAGGTGGGTGCTGCCCTGAAGACGGCCAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTg                       <  2:680655/150‑1 (MQ=255)
                                                                                                                                 tGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGt                   <  2:4167790/150‑1 (MQ=255)
                                                                                                                                  gccTGGCGCCCGCGGCGGCTGCTTCGCGGGTAACCCCGCGCCTACCGGTGGGGGCGGCCCTGAAGCCGGCACGGCCCGTGTCGGCGCGGGTTCCCCCGCGATGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTc                  <  1:655614/148‑1 (MQ=255)
                                                                                                                                    cTGGAGACCGAGTCGGCTGCTTCGCGGGTAATCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCACGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCca                <  2:3617949/150‑1 (MQ=255)
                                                                                                                                    cTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACTGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGGGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCca                <  1:4881939/150‑1 (MQ=255)
                                                                                                                                    cTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCca                <  2:204731/150‑1 (MQ=255)
                                                                                                                                    cTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCca                <  2:910395/150‑1 (MQ=255)
                                                                                                                                          aCCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTtc          <  1:3504361/150‑1 (MQ=255)
                                                                                                                                             gAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCcctgta                                                                                      <  2:6221449‑M2/71‑7 (MQ=255)
                                                                                                                                                  ggCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAtg  <  2:3175746/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GGCATGGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATG  >  NC_002947/4163914‑4164209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.