| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 60,726 | G→A | 6.1% | intergenic (‑118/‑105) | PP_0051 ← / → PP_0052 | sigma‑54 dependent transcriptional regulator/beta‑lactamase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 60,726 | 0 | G | A | 6.1% | 966.2 / 33.5 | 308 | intergenic (‑118/‑105) | PP_0051/PP_0052 | sigma‑54 dependent transcriptional regulator/beta‑lactamase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (141/148); new base A (11/8); total (152/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 319 total aligned reads displayed.
AGAGCTAGGATGAGAGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTACGACGAG > NC_002947/60577‑60875 | agCTAGGATGAGAGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGt < 1:4824687/150‑1 (MQ=255) gATGAGAGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACt < 1:5257805/150‑1 (MQ=255) gagaGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGc > 2:1723235/1‑150 (MQ=255) gagaGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGc < 2:4216152/150‑1 (MQ=255) gagaGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGc > 1:2182057/1‑150 (MQ=255) gagaGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGc > 2:1197713/1‑150 (MQ=255) gagGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCa < 1:1197713/150‑1 (MQ=255) ggATGGGCGTCAGGCATGTCGGCACCGGATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagt < 1:5846143/150‑1 (MQ=255) gATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCAGTAAAACCGGCCagtt < 1:752858/150‑2 (MQ=255) gggCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtgagt < 1:5966248/150‑1 (MQ=255) gggCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCAGTAAAACCGGCCagttgca < 2:2453933/150‑5 (MQ=255) ggCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtgagtg < 1:3680417/150‑1 (MQ=255) gCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTgg < 1:3493420/150‑1 (MQ=255) ttCAGGCATGACGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCa > 1:5804401/1‑150 (MQ=255) ggCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCaaaaa < 1:4767282/150‑1 (MQ=255) gCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAg > 1:5187770/1‑150 (MQ=255) cATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGc < 2:2325411/150‑1 (MQ=255) aTGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGcc > 2:6020245/1‑150 (MQ=255) aTGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAG‑TTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCt < 2:4323701/150‑1 (MQ=255) gTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTg < 2:6784774/150‑1 (MQ=255) cGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGgc > 1:2781425/1‑150 (MQ=255) ggCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGgca > 2:6509170/1‑150 (MQ=255) ggCACCGTATGGATGACCGACGCAGGGTAACAAGGACTCCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGgca < 1:4430982/150‑1 (MQ=255) tGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTg > 1:852156/1‑150 (MQ=255) tGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTg < 1:4486200/150‑1 (MQ=255) tGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTg < 1:6772343/150‑1 (MQ=255) ggATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTTCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGa < 2:177166/150‑1 (MQ=255) ggATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGa < 2:3430756/150‑1 (MQ=255) ggATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGa < 1:4314845/150‑1 (MQ=255) gATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGAt > 1:124572/1‑150 (MQ=255) aCCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAg < 1:56354/150‑1 (MQ=255) ccGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGc < 1:1002571/150‑1 (MQ=255) ccGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGc > 2:3518254/1‑150 (MQ=255) gACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTc < 2:4476984/150‑1 (MQ=255) gACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTc < 1:1074162/150‑1 (MQ=255) gACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTc < 2:3256541/150‑1 (MQ=255) gACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCAGTAAAACCGGCCagttg < 1:3314987/114‑3 (MQ=255) aCGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTcc > 1:5533470/1‑150 (MQ=255) aCGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTcc < 2:477857/150‑1 (MQ=255) ggTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCAc < 1:6327231/150‑1 (MQ=255) aaCAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGc < 1:1652592/150‑1 (MQ=255) aCAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCAGTAAAACCGGCCagttgc > 2:1425672/1‑101 (MQ=38) cAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCt < 2:4691596/150‑1 (MQ=255) aaGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTGTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCtc > 2:2842607/1‑149 (MQ=255) aGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTAc < 2:2581418/150‑1 (MQ=255) gACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGc < 1:6545517/150‑1 (MQ=255) acTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggc > 1:3853800/1‑150 (MQ=255) tGCCATGGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcgg < 1:3106152/150‑1 (MQ=255) ccATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcgggg > 1:4709354/1‑150 (MQ=255) ccATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcgggg < 2:2738939/150‑1 (MQ=255) cATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcggggc < 1:3523663/150‑1 (MQ=255) tGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGa < 2:2260414/150‑1 (MQ=255) gCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATa > 2:314630/1‑150 (MQ=255) gTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAAt < 1:1060791/150‑1 (MQ=255) gTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAAt < 1:2053364/150‑1 (MQ=255) tCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAAtt < 2:5219129/150‑1 (MQ=255) cAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTg < 1:2742171/150‑1 (MQ=255) aGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTgg > 1:2878407/1‑150 (MQ=255) aGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTgg < 1:1300450/150‑1 (MQ=255) aGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTGTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTgg > 1:2431591/1‑150 (MQ=255) gTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGga < 2:3031626/150‑1 (MQ=255) gTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGga < 1:2337385/150‑1 (MQ=255) gACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGaa > 2:1034656/1‑150 (MQ=255) gACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGaa > 2:3827764/1‑150 (MQ=255) aCTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCt > 1:3381384/1‑120 (MQ=255) aCTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCt < 2:3381384/120‑1 (MQ=255) cTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACg < 2:6680586/150‑1 (MQ=255) tGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGAGAAATTGGAGAACGt > 2:5478003/1‑150 (MQ=255) ccACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtga > 2:3957285/1‑150 (MQ=255) ccACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtga < 1:389134/150‑1 (MQ=255) cACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgat > 2:6404100/1‑150 (MQ=255) cACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgat < 1:6737355/150‑1 (MQ=255) aCCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgatg < 1:3998575/150‑1 (MQ=255) aCCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgatg > 2:746309/1‑150 (MQ=255) gCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCAGATAAATTGGAGAACGTGATGatcatc > 1:1491152/1‑150 (MQ=255) cTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCg < 1:6016858/150‑1 (MQ=255) tGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCgg < 2:2125580/150‑1 (MQ=255) tGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCgg > 1:4865972/1‑150 (MQ=255) tGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCgg > 1:2369364/1‑150 (MQ=255) tGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCgg > 1:2154426/1‑150 (MQ=255) ccAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGca > 1:5457628/1‑150 (MQ=255) ccAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGca > 2:1472790/1‑150 (MQ=255) cAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGcaa > 1:4278392/1‑150 (MQ=255) aGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGcaac < 2:1870998/150‑1 (MQ=255) tttGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCaacaac < 1:493339/150‑1 (MQ=255) cGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCTTGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATTATCATCGGCAACAACCTTCAc < 2:5804401/150‑1 (MQ=255) gCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACg < 2:6174337/150‑1 (MQ=255) tGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGAc > 2:5071143/1‑150 (MQ=255) tGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCt > 1:4100407/1‑150 (MQ=255) tGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCt > 1:1913102/1‑150 (MQ=255) actcaCTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCt > 2:3420570/5‑150 (MQ=255) gCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGACTAAAGTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCtt > 2:4069980/1‑150 (MQ=255) cTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTac > 2:502359/1‑150 (MQ=255) tGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGAATGCATATTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCGTCACGTGGACGCCTTCTacg > 1:6470319/1‑150 (MQ=255) ggCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTacga < 2:852156/150‑1 (MQ=255) ggCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTacga < 2:6337992/150‑1 (MQ=255) gCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTacgac < 2:1959152/150‑1 (MQ=255) cGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTAcgacga > 1:5067701/1‑150 (MQ=255) ggTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTg < 1:992023/96‑1 (MQ=255) ggTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTACGACGAg > 1:1806271/1‑150 (MQ=255) | AGAGCTAGGATGAGAGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTACGACGAG > NC_002947/60577‑60875 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |