| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,311,259 | C→G | 100% | G188R (GGC→CGC) | PP_2907 ← | two‑component system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,311,259 | 0 | C | G | 99.6% | 952.7 / ‑4.7 | 266 | G188R (GGC→CGC) | PP_2907 | two‑component system response regulator |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (124/141); total (124/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 267 total aligned reads displayed.
CAGGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCCCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTGA > NC_002947/3311112‑3311405 | cagGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGcgcg < 1:1048529/150‑1 (MQ=255) gcggcTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGAt < 2:4377967/150‑1 (MQ=255) cTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa < 2:1911157/150‑1 (MQ=255) cTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa < 2:3916902/150‑1 (MQ=255) cTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa < 1:3225225/150‑1 (MQ=255) tGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAg > 1:3073022/1‑150 (MQ=255) ggTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGt < 1:3601682/150‑1 (MQ=255) tAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGa > 1:5729606/1‑150 (MQ=255) tAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGa < 1:6347577/150‑1 (MQ=255) gaagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATa > 1:2719799/1‑150 (MQ=255) aagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAg > 2:3718724/1‑150 (MQ=255) cTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCa < 1:1983726/150‑1 (MQ=255) cTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCa < 2:4673928/150‑1 (MQ=255) cTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCa < 1:6451292/150‑1 (MQ=255) tCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAg > 1:437479/1‑150 (MQ=255) tCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAg > 2:550626/1‑150 (MQ=255) cAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGAc > 1:1402785/1‑150 (MQ=255) tttAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCt > 2:406622/1‑150 (MQ=255) tttAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCt > 1:1909586/1‑150 (MQ=255) tttAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCt > 1:4493149/1‑150 (MQ=255) ttAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTc < 1:497965/150‑1 (MQ=255) aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa < 1:2981532/150‑1 (MQ=255) aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa < 2:3263734/150‑1 (MQ=255) ggTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatc < 2:2829739/150‑1 (MQ=255) gTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatca > 2:5332457/1‑150 (MQ=255) ttCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcat > 2:3437713/1‑150 (MQ=255) ttCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcat < 1:1464549/150‑1 (MQ=255) aGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTCATAGCCCCAGACTTCCTCGAAAatcatcat > 1:328283/1‑150 (MQ=255) cAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATcc < 2:4223294/150‑1 (MQ=255) aaTGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGCTCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCcg > 2:1251630/1‑150 (MQ=255) aaTGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCcg > 1:391962/1‑150 (MQ=255) aaTGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCcg > 1:2147795/1‑150 (MQ=255) tGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCcgcg < 2:987955/150‑1 (MQ=255) tGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCcgcg < 2:5707121/150‑1 (MQ=255) ggCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGt < 2:1090692/150‑1 (MQ=255) gCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTg > 1:177462/1‑150 (MQ=255) aTAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGAt > 1:2317987/1‑150 (MQ=255) tAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATc > 1:4258517/1‑150 (MQ=255) aGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCa > 1:1857219/1‑150 (MQ=255) aGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCa > 2:5766672/1‑150 (MQ=255) gCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCAc < 2:6812886/150‑1 (MQ=255) ccGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCAcc > 1:3421102/1‑150 (MQ=255) cGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCt > 2:1291326/1‑150 (MQ=255) gAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTgg < 1:6777623/150‑1 (MQ=255) gCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGcc < 1:550626/150‑1 (MQ=255) gCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCGTGCGCAGGCGGCCGATGTGCGCGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGcc < 2:3973039/150‑1 (MQ=255) ccgtaccgtaCGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTg > 1:514819/1‑144 (MQ=255) cgtaccgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtg > 1:4075072/1‑150 (MQ=255) gtaccgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtgt > 2:303006/1‑150 (MQ=255) gtaccgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtgt < 2:2178193/150‑1 (MQ=255) taccgtacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtgtg < 2:3011905/150‑1 (MQ=255) cGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATc < 1:2457010/150‑1 (MQ=255) gATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAg < 1:259835/150‑1 (MQ=255) agcAGCGGCGCCGGGCCGGGTGAGTCGATCGTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATCGCCCCAGACGTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAgg < 2:6470626/148‑1 (MQ=255) ggcgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTcc < 1:6745789/150‑1 (MQ=255) ggcgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTcc > 2:6121090/1‑150 (MQ=255) tGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCagcagc > 1:1177368/1‑150 (MQ=255) gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt < 1:844924/150‑1 (MQ=255) gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt < 2:6332725/150‑1 (MQ=255) gggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTa > 2:936742/1‑150 (MQ=255) ggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTAc > 2:6558688/1‑150 (MQ=255) tGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTc < 2:5162404/150‑1 (MQ=255) gAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCg < 2:6741404/150‑1 (MQ=255) gTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGt < 1:494494/150‑1 (MQ=255) tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg > 1:954460/1‑150 (MQ=255) tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg < 2:4868324/150‑1 (MQ=255) gATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTggg > 1:4354664/1‑150 (MQ=255) aTCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCAc > 1:3712645/1‑101 (MQ=255) aTCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGc < 2:1738032/150‑1 (MQ=255) aTCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGc < 2:5200272/150‑1 (MQ=255) aTCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGc > 1:6588259/1‑150 (MQ=255) tcttctTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCa < 1:3868262/150‑1 (MQ=255) tcttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACa < 1:5019310/150‑1 (MQ=255) tcttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACa < 1:3403911/150‑1 (MQ=255) ttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACATCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAgg > 1:936593/1‑150 (MQ=255) gcgcAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGtt < 1:5922954/150‑1 (MQ=255) gcAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGa < 2:5021749/150‑1 (MQ=255) cAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg < 1:5303970/150‑1 (MQ=255) cAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg < 2:736297/150‑1 (MQ=255) aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTg > 1:5187609/1‑92 (MQ=255) aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAgg < 1:4527038/150‑1 (MQ=255) aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAgg < 1:1608714/150‑1 (MQ=255) aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAgg < 2:5997661/150‑1 (MQ=255) gcggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtgt < 2:2651430/98‑1 (MQ=255) gcggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtgt < 2:4152976/98‑1 (MQ=255) gcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgtt < 2:5362107/150‑1 (MQ=255) gcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgtt < 1:2877404/150‑1 (MQ=255) ccGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttg < 2:1630186/150‑1 (MQ=255) gATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTc > 2:2249688/1‑150 (MQ=255) aTGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCa < 2:2318415/150‑1 (MQ=255) gCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCgg < 1:4118241/120‑1 (MQ=255) gCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACcgc > 2:4431061/1‑150 (MQ=255) aCGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCgcgg > 2:5653201/1‑150 (MQ=255) aCGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCgcgg > 2:2131283/1‑150 (MQ=255) gTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCgcggcg > 1:245622/1‑150 (MQ=255) tCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGgcgc < 2:1988865/150‑1 (MQ=255) ggTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGt < 1:4786348/150‑1 (MQ=255) gTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg < 1:3851429/150‑1 (MQ=255) gTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg > 2:346598/1‑150 (MQ=255) gTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTg > 1:5172875/1‑150 (MQ=255) | CAGGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCCCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTGA > NC_002947/3311112‑3311405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |