| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,471,833 | T→G | 24.7% | intergenic (‑16/+108) | PP_3081 ← / ← PP_5560 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,471,833 | 0 | T | G | 24.7% | 487.8 / 58.8 | 287 | intergenic (‑16/+108) | PP_3081/PP_5560 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (47/152); new base G (56/18); total (117/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.67e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 289 total aligned reads displayed.
CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTCC > NC_002947/3471684‑3471982 | cgcgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCt < 1:5147061/150‑1 (MQ=255) acaaCCTGCCCGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGgc > 1:1023074/4‑150 (MQ=255) aCCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgcggc < 2:385359/150‑1 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc < 2:2831664/150‑1 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGccca > 2:3096466/1‑148 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaa < 2:81073/150‑1 (MQ=255) gCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaagg < 2:5520200/150‑3 (MQ=255) gCAGGGTGTCCCCGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGCCGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaagg < 2:5932746/150‑3 (MQ=255) aGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCt > 2:3297102/1‑150 (MQ=255) gTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCCAcccggt > 1:3570305/1‑145 (MQ=255) tCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCCACGCAGTGCAg > 2:1035117/1‑150 (MQ=255) cccAGCTCTGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAgg < 1:6747555/150‑1 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAggg < 2:3243139/150‑1 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAggg > 2:3178091/1‑150 (MQ=255) cAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCCACCCGGTGGACGgc > 1:3728220/1‑150 (MQ=255) cAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACCCTGTGCAGGgc > 2:3211795/1‑150 (MQ=255) cAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGGCCACGCGGTGGAGGgc > 1:5312062/1‑150 (MQ=255) aGCTCTGTTGCGGGGTCCGCTCTTCACCGGCACCGATTGCCGGGTCCTGGCCGACCTGTTGCAGGGAAATGACGCCGCCATCATTTAAAGACGAGGAACTCACCGACATCGCGCCTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGgca < 2:5319982/150‑1 (MQ=255) aGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgca < 2:6834996/150‑1 (MQ=255) gCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCAAGCGGTGCAGGgcag > 1:368574/1‑150 (MQ=255) aGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCAAAGCAGTGAAGGGCAGCaaa > 2:215832/1‑150 (MQ=255) aGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCAACGCAGTGCAGGGCAGCaaa > 2:6487381/1‑150 (MQ=255) gtggCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAag < 2:5172683/147‑1 (MQ=255) gTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCAGGGCAGCAAag > 2:983115/1‑150 (MQ=255) ttGGGGGGTCCGCTCTTCACCGGCACCGAAGGCCGGGTCCTGGCCGACCTGTTGCTGGGCAATGACGCCGCAATATGTCAAATACGAGTAACTTACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagc < 1:3252615/150‑1 (MQ=255) ttGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagc < 1:6875207/150‑1 (MQ=255) ttGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCGGTGCAGGGCACCAAagc > 2:2462435/1‑150 (MQ=255) tGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagca < 2:4743488/150‑1 (MQ=255) cGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 1:4492021/150‑1 (MQ=255) ggggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCg < 2:5796574/150‑1 (MQ=255) ggggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGGAGGGCACCAAAGCAGCg > 1:3099142/1‑150 (MQ=255) cGCTCTTCCCCGGCACCGCTTGCGGGGTCCTGGCCGACCTGTTGCTGGGAATTGCCGCCGCCATCTGTTAAAGACGAGGAAGTGACCGACATCGCGCCTTGGCCGCGTGGGGGGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGc < 1:2586773/150‑1 (MQ=255) cGCTCTTCACCGGCACCGCTGGCGGGGTCCTGGCCTACCTGTTGCCGGGAAATGACGCCGCCATCAGTGAAAGACGAGTAACTGACCGACATCGCGCCTTGGCCGCGTGCGGGGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGc < 1:2018956/150‑1 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGGGGCGGCCCAACCGGGGGAGGGGAGCCAAGCAGCGaaacacc > 1:341476/1‑145 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc < 1:4664969/115‑1 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc > 2:4664969/1‑115 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGGGGCCCACGCGGTGCCGGGCAGCCAAGCAGCGCACAGcc > 2:6660066/1‑150 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGcc > 2:3916360/1‑150 (MQ=255) ctctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTTTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGCAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCa < 1:6175225/150‑1 (MQ=255) ctctTCACCGCCACCGCTGGCGGGGTCCTGGCCGACTTGTTGCTGGGAATTGACGCCGCCATCATTGAAAGACTAGGAACTGACCGACATCGCGCCTGGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCa < 1:2440071/150‑1 (MQ=255) tctTCACCGGCACCGCATGCGGGGTCCTGGCCGACCTGTTGCAGGGCATTGACGCCGCCATCTGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAg < 1:476936/150‑1 (MQ=255) ctTCCCCGGCCCCGCATGCCGGGGCCTGGCCGACCTGTTGCTGGGCATTGACGCCGCCATCAGTGAAAGACGAGGAACGGACGGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACacgatgg < 2:5252578/150‑7 (MQ=255) ttCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCCACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAgtg > 2:5438991/1‑150 (MQ=255) ttCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAAAGCGGTGGAGGGCACCAAAGCAGCGAACAGCCCgtg > 2:231681/1‑150 (MQ=255) cGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCCGGGAAATGACGCCGCCATCTGTTAAAGACGAGCAACTGACCGACATCGCGCCTGGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAG‑CAGTGTCTGAg < 1:3290189/150‑1 (MQ=255) cGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCTGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGa < 1:4119846/150‑1 (MQ=255) ggCACCGCAGGCCGGGTCCTGGCCGACCTGTTGCCGGGCAATGACGCCGCCATCTGTGAACGACGAGGAACTGACCGACATCGCGCCTGGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAg < 1:6681809/150‑1 (MQ=255) cGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACACCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCCGGGCAGCAAAGCAGCGAACAGCCAGTGTCGGTGGTGcc > 2:5068890/1‑149 (MQ=255) cATGCCGGGTCGTGGCCTACCTGTTGCAGGGCATTGACGCCCCCATCAGTTAAAGACGAGGAACTGACCGACAGCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATg < 1:2924522/150‑1 (MQ=255) cGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGGCAACCCCGTGGAGGGGCGCAAAGCAGCGAACAGCCACTGTCTGAGGTGGCTGGTGaa > 1:4335880/1‑150 (MQ=255) cGGGTCCGGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGCGGACCGGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCaa < 2:1217819/150‑1 (MQ=255) ccgggCCGACCTGTTGCTGGGAAATGACGCCGCCATCAGTTAAAGACGTGGAACTGACCGACAGCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 1:2364259/147‑1 (MQ=255) cTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCTGCGGCGGCCAAAGCAGTGCAGGGCAGCAAAGCCACCAACAGCCACTGTGTGAGGTGCCTGGGCAATCCTTg > 2:5995512/1‑150 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGTGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTg‑g > 2:3492013/1‑150 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCCGTGTCTGAGGTGCATGGTCAATCCATg‑g > 2:1621246/1‑150 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTg‑g < 1:5724342/150‑1 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtttg > 2:6184305/1‑148 (MQ=255) ggCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCAGGGCAGCCAAGCAGCGGACAGCCAGTGTCTGAGGTGCATGGTCAATCCATG‑Gc > 2:1949844/1‑150 (MQ=255) gACCTGTTGCAGGGCAATGACGCCGCCATCAGTTAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAggg < 2:1791318/150‑1 (MQ=255) aCCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGc < 2:6416042/150‑1 (MQ=255) ttGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCCACCCGGTGCAGGGCAGCAAACCAGCGAACAGCCACTGTCGGTGGTGCCTGGTGAATCCTTG‑GCAGGGCGTCAc > 2:6462666/1‑150 (MQ=255) ttGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCGTG‑GCAGGGCGTCAc > 2:498369/1‑150 (MQ=255) gCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACgg < 2:2697286/150‑1 (MQ=255) gCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCCGGGCCGCAAAGCCGCGCACACCCCGGGTCGGCGGTGCATGGTCAAACCATG‑GCCGGGCGGCACgg > 2:6326548/1‑150 (MQ=255) aGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCt < 2:856347/150‑1 (MQ=255) cAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGt < 2:1263365/150‑1 (MQ=255) gccgccgcCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAg < 1:2694573/148‑1 (MQ=255) gACGCCGCAATCAGTTAAATACGAGCAACTGACCTACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAg < 1:3134049/150‑1 (MQ=255) gccgccATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGGCAAAGCGGTGCAGGGGCGCAAAACAGCGCACAGCCCCTGTGTGAGGTGGATGGTCAATCCATG‑GCAGGGGGTCACCGCGCAGTGTAGccc > 1:5517004/1‑150 (MQ=255) cgccATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAg < 1:3325980/150‑1 (MQ=255) cgccATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAg < 2:4547070/150‑1 (MQ=255) gccATCAGCGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTCTGCAGGGCAGCAAAGCAGCGAACAGCCCGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCAAGCCCAgg > 2:6771829/1‑150 (MQ=255) ccATCAGTGAAAGACGAGGACCGGACCGACATCGCGCCTGGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGt < 1:4267416/150‑1 (MQ=255) tCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCCACGCGGTGCAGGGCAGCAAAGCAGCGAAAAGCCCGGGTCTGAGGGGGATGGTCCATACTTG‑GCCGGGCGTCACGGCGCAGGCTAGCCCAGGTCTg > 2:4135959/1‑150 (MQ=255) ctgTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCTCAGGTCTGc < 2:4518612/148‑1 (MQ=255) aGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCt < 1:6091705/150‑1 (MQ=255) gAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCa < 1:1512829/150‑1 (MQ=255) gAAAGACGAGGAACTGACCGACATCGCGCCTTGCCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCa < 1:1137925/150‑1 (MQ=255) aGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCAACCCGGTGCCGGGCCGCAAAGCCCCGAACAGCCAGGGGCTGAGGGGCCTGGGCAAACCATG‑GCAGGGCGTCACGGCGCAGTCTAGCCCACGGCTGCTTCAGCg > 2:3600038/1‑150 (MQ=255) cgtggAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCt < 1:1258243/147‑1 (MQ=255) gAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACCCGGTGGCGGGCCGCAAAGCAGCGCACACCCCGTGTGTGAGGGGCAAGGTCAATACATGTGCA‑GGCGTCACCGCTCAGTCAAGGCCCGGGATGCTTCAGCGGcgg > 2:1853936/1‑148 (MQ=255) aaCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGTGGCTGTCCt < 1:4422050/150‑1 (MQ=255) aaCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCt < 1:3975220/150‑1 (MQ=255) aCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTg < 1:2169780/150‑1 (MQ=255) aCTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTg < 1:983115/150‑1 (MQ=255) cTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTgg < 1:1018708/150‑1 (MQ=255) cTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTgg < 1:195718/150‑1 (MQ=255) cTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTgg < 1:2410482/150‑1 (MQ=255) ccGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCACTGTGTGAGGGGCATGGTCAATCCGTG‑GCAGGGCGTCACGGCTCAGTCCCGCCCCGGGCTGCTTCAGCGGCTGTCCTGGTccg > 2:5638709/1‑149 (MQ=255) cGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTc < 1:6001273/150‑1 (MQ=255) gACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCg < 2:3555167/150‑1 (MQ=255) gACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCAGGGCCGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAAAACATG‑GCCGGGCGTCACGGCTCAGTCTAGCCCAGGTCGGCTTCAGCGGCTGTCCAGGTCCTCg > 2:443703/1‑150 (MQ=255) cgcgCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGt < 2:2078204/150‑1 (MQ=255) cgcgCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGt < 2:2446133/150‑1 (MQ=255) cgcgCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGt < 2:2901541/150‑1 (MQ=255) cgcgCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGt < 1:5682460/150‑1 (MQ=255) gcgcCTTGGCCGCCTGCGGCGGCCAACCCTGTGCAGGGCAGCAAAGCAGCCAACACCCACTGTCTGAGGTGCATGGTCAATACTTG‑GCAGGGCGTCACGGCTCAGTCAAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCGCGGCAGTg > 2:2740635/1‑150 (MQ=255) cTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTc < 2:4408281/150‑1 (MQ=255) gccgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGCACAGCCAGTGTCTGAGGTGCATGGTCAATCCTGG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCt < 2:3376041/150‑1 (MQ=255) tGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTcc < 1:590817/150‑1 (MQ=255) | CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTG‑GCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTCC > NC_002947/3471684‑3471982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |