| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,620,448 | A→G | 9.4% | intergenic (+19/‑210) | PP_3186 → / → codB | transcriptional regulator/cytosine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,620,448 | 0 | A | G | 9.4% | 623.5 / 17.2 | 239 | intergenic (+19/‑210) | PP_3186/codB | transcriptional regulator/cytosine transporter |
| Reads supporting (aligned to +/- strand): ref base A (60/140); new base G (16/3); total (95/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.15e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 245 total aligned reads displayed.
CAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAG > NC_002947/3620300‑3620597 | cAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGAt < 2:3579774/150‑1 (MQ=255) aaGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGTCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGAACGTTTAAACCGCCGTGGGCTGGGTGAtt < 2:2189626/150‑1 (MQ=255) aaGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGAtt < 2:1664628/150‑1 (MQ=255) cACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtact < 1:761001/150‑1 (MQ=255) ccTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtacaac > 2:1452509/1‑150 (MQ=255) gATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccag < 2:5218887/150‑1 (MQ=255) tGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagcc < 1:1243788/150‑1 (MQ=255) tGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTAGTAATCAcccagcc < 1:444938/150‑1 (MQ=255) gcacgggCCGCGCGCAGCATGACCGCGCAGCGGGTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCGGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagccc < 2:4416845/145‑1 (MQ=255) accTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTACACCGCCGTGGGCTGGGTGATTACTAcccagccca < 1:2526875/148‑1 (MQ=255) aaCTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagccca < 1:5639033/150‑1 (MQ=255) aCTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagcccag < 1:2437944/150‑1 (MQ=255) cTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGGGCTTACTACCCACCCCAgg > 2:4679892/1‑150 (MQ=255) ggCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGAc < 2:359274/150‑1 (MQ=255) cgcAGCATGACCGCGCAGCGGTTCGCCGAACGGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGTAGGCGGTTTTCTGGCAAATGGGGTTGGACGGGACCGTTTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTg < 1:6478000/150‑1 (MQ=255) cagcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGt < 2:2378856/150‑1 (MQ=255) cagcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGt < 2:5614916/150‑1 (MQ=255) agcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGTGGGGGGTTACTAAACAGCCCCCGACCCCGTTGGTg > 1:4597543/1‑150 (MQ=255) gcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGc < 2:1437106/150‑1 (MQ=255) gcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTGGGCCAGGCCTCCAGCCTGGAGGCGTATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGc < 1:1366187/150‑1 (MQ=255) tGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGTGTAATACCCACCCCACGACCCCGTTGGGGCaag > 1:4347607/1‑148 (MQ=255) gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCTGGCCTCCAGCCTGGTGGCGGTTTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATgg < 2:74156/150‑1 (MQ=255) gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATgg > 2:4085894/1‑150 (MQ=255) gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATAGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATgg < 2:1813220/150‑1 (MQ=255) aCCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATggg < 2:2814180/150‑1 (MQ=255) cgcagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGcc < 2:3168253/149‑1 (MQ=255) gcagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAACCAGCCCAGGACCGCGTTGGTGCATGGGCGccg > 2:4175513/1‑149 (MQ=255) gcagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAACCCAGCCCACGACCGCTTTGGTGCAATGGCGcca > 2:812370/1‑149 (MQ=255) cGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCaaa < 1:4049028/150‑1 (MQ=255) ggTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGTTTACTAACCACCCCACCACCCCGTTTGTGCAAGGGCGCCGCaaaa > 1:1436535/1‑150 (MQ=255) gTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagccc < 2:4490164/118‑1 (MQ=255) gTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagccc > 1:4490164/1‑118 (MQ=255) gTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAAt > 2:6300746/1‑150 (MQ=255) gTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTAATACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAAt > 2:4447698/1‑150 (MQ=255) ttCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCACCCCCCGACCCCGTTGGTGCATGGGCGCCGCcaaaaa > 1:2817884/1‑148 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGTGGCGGATTTCTGGCAATTGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 1:871497/150‑1 (MQ=255) ccGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGTTTAATAACCACCCCAGGACCCCGTTTGTGCATGGGCGCCACAAAAAAAgtc > 1:3375779/1‑150 (MQ=255) acgggCAGGTATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTTATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTcc < 1:173872/147‑1 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGcaca < 1:5095778/150‑1 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGACCACGACCCCTTTTGTGCATGGGCGCCGCAAAAAAATTAGTCCCGcaca > 1:3877165/1‑150 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTAAAACCCACCCCACGACCCCGTTGGTGCATGGGCGCCGCAAAAAAAGTAGTACCGcaca > 1:1539557/1‑150 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCAGGGTGATTACTACCCCGCCCAGGGCCCCGTTTGTGCATGGGCGCCACAAAATAAATCGGCCCCcaca > 2:1779353/1‑150 (MQ=255) ggATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGTGGGTGGTTACAACCCCGCCCAGGGCCGCTTTGGGGGATGGGCGCCGCAAAAAGAGTCGTCCCGCACCCt > 2:3625552/1‑150 (MQ=255) ggATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGCTTAAAAACCACCCCACGACCCCCGTGGTGCCTGGGCGCCGCAAAATAAATCGTCCCGCccaca > 2:1376794/1‑149 (MQ=255) gATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTc < 1:113569/150‑1 (MQ=255) aTTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGGGATTCCAACCCCGCCCCCGCCCGCGTTGGGGCATGGGCGCCGCAAAATAACGCGGCCCGcccccacc > 2:2042000/1‑143 (MQ=255) ttttGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGGGGGGGGTTTGTTACCCGCCCCGGACCGCGTTGGGGGCTGGGGGCCGCAAAAAAATGCGGGCCGCCCACCCCAg > 1:215517/1‑150 (MQ=255) ttGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCCGCCCAGGACCGCGTTGGGGCATGGGCGCCTCAAAATAAGTCGTCCCGCCCACTCCAGag > 2:2214974/1‑149 (MQ=255) ttGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAACCCACCCCAGGAACGCGTTTGGGCATGGGCGCCACCAAATAAGTCGTCCCCCACACGCCCGag > 2:6511622/1‑149 (MQ=255) tGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATc < 1:3216095/150‑1 (MQ=255) tGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATc < 1:4707343/150‑1 (MQ=255) gCCAGGCCTCCAGCCTGGAGGCGTATTTCTGGAAATTGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGTGGGTGATTACTACCCACCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGt < 1:70404/150‑1 (MQ=255) ccAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTc < 1:6723733/150‑1 (MQ=255) tccgCCTCCAGGCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGGGATTAATAACCAGCCCACGACCGCTTTGGTGCATGGGCGCCGCAAAAAAAATACTACCGCACACTCCACATCggcc > 2:3507375/4‑147 (MQ=255) cAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCa < 2:6074811/150‑1 (MQ=255) gCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGAt < 2:4579859/150‑1 (MQ=255) gCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGAt < 2:1133662/150‑1 (MQ=255) ccTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGGGGGGGGTTAATAACCAGCCCCCGACCGCAGTTGTGCATGGGGGCCGCAAAAAAAATCGTACCCCACACAACAGAAAGTCAGATc > 1:3132953/1‑150 (MQ=255) cTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGCTTACTACCCAGCCCAGGACCCCGTTGGTGCAGGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCCGATCGTCAGATCg > 2:3879377/1‑150 (MQ=255) tCCAGCCTGGTGGCGGATTTCTGTCAATTGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTTATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGc < 1:2507841/150‑1 (MQ=255) tCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAACCAGCCCAGGACCCCGTTTGTGCAAGGGCGCCGCAAAATAAGTCGTCCCCCACACACCAGAACGTCAggtagc > 2:3141026/1‑145 (MQ=255) tCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTAATAACCAGCCCAGGACCGCGTTGGTGCATGGGCGCCTCAAAAAAAGTCGTCCCCCACACAACAGATCGTCAGATAGc > 2:978080/1‑150 (MQ=255) ccAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCa < 1:1907699/150‑1 (MQ=255) cAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAg < 2:1020057/150‑1 (MQ=255) cAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAg > 2:4519583/1‑150 (MQ=255) cAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAg < 1:3318101/150‑1 (MQ=255) ggAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTaa < 2:4245232/150‑1 (MQ=255) ggAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTaa < 2:2690626/150‑1 (MQ=255) ggAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAAACCAGCCCAGGACCCCTTTGGTGCAAGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATAGCAGCTTTaa > 2:2756655/1‑150 (MQ=255) ggAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGTGGTTTTTACAAACCAGCCCACGACCCCTTTTGTTTATTGTCGCCTCAAAAAAATTCGAAACCCACAAAACAGATAATCAGAAAGCAGCGTTaa > 1:6814561/1‑150 (MQ=255) gAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAAt < 1:6039906/150‑1 (MQ=255) gAGGCGGATTTCTGGCAAAGGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAAt < 1:4854759/150‑1 (MQ=255) ggCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAAtgt < 1:4436615/150‑1 (MQ=255) ggggATTTCTGGCTATTGGGGTTGGCCGGTACCGTGTAATGCGCCGTGGGCTGGGTGATTACGACCCAGCCCTGGACCGATTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAAtgtg < 1:219389/148‑1 (MQ=255) gCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTTATTACTACCCAGCCCAGGACCg < 1:1640702/79‑1 (MQ=255) tGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACGACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCa < 1:21112/150‑1 (MQ=255) aaaTGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGTTTACAAACCAGCCCCGGACCCCGTTGGTGCAAGGGCGCCTCAAAATAAAGCGTCCCGCACACACCCGAACGTCCGATCGCCGCTTTAATGTGCACACGGCAAATg > 2:2061396/1‑150 (MQ=255) tGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGAt < 2:6817607/150‑1 (MQ=255) gTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTTCAACCCCGCCCCGGTCCCCGTTGGTGCAGGGGCGCCGCGAAATTAGTCGTCCCGCACACACCCGATCCTCAGATCGCAGCTGTAAGGTGCACCGTGGATATGGGGTTCt > 2:5924638/1‑150 (MQ=255) ttGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTg < 1:5695248/150‑1 (MQ=255) tGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTgg < 2:2607040/150‑1 (MQ=255) tGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTgg < 1:2954362/150‑1 (MQ=255) aCGGGACCGTGTAAACCGCCGTGGGCTGGGGGTTTAATACCCAGCCCAGGACCGCGTTTGTGCATGGGCGCCGCAAAATAAGTCGTCCCGCCCACACCAGAACGGCACATCGCAGCGTTAATGTGGACACTGCAACAGGCTTTCTTGGCg > 2:5770073/1‑150 (MQ=255) gggACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGaa < 1:2551427/150‑1 (MQ=255) ccGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGc < 1:6607668/150‑1 (MQ=255) cGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCACGACCGCGTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACACCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTATGGGCGAACAGcc > 2:5065229/1‑150 (MQ=255) aaaCCGCCGTGGGCTGGGTGATTACTACCCAGCCCATGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGAtt < 1:5815652/150‑1 (MQ=255) aaaCCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCGCAAAATAAGTCGTCCCGCACACACCACAGCGTCAGATCGCAGCTTTAATGTGCACCGTGCATATGGATTTCTGGGCGAACAGCCCGAtt > 2:4996731/1‑150 (MQ=255) tcctGGGCTGGGTAGTAATCACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTcc > 1:1078989/4‑150 (MQ=255) cgTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCg < 1:267353/150‑1 (MQ=255) gTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCgg < 2:2528028/150‑1 (MQ=255) gTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCgg < 1:3686740/150‑1 (MQ=255) gggCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGt < 2:3468817/150‑1 (MQ=255) gggCTGGGTAGTAATCACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGt > 1:3571682/1‑150 (MQ=255) ggCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTg > 2:1857800/1‑150 (MQ=255) tGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTggcg < 2:525113/150‑1 (MQ=255) tGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGgcgc < 1:5122155/150‑1 (MQ=255) aTTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAg > 1:6467576/1‑150 (MQ=255) aTTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAg > 1:6316397/1‑150 (MQ=255) aTTACTACCCAGCCCAGGACAGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAg > 2:5676687/1‑150 (MQ=255) | CAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAG > NC_002947/3620300‑3620597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |