BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,641,395	A→T	5.1%	I111F (ATC→TTC)	PP_3203 →	MFS transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,641,395	0	A	T	5.1%	962.3 / 24.8	292	I111F (ATC→TTC)	PP_3203	MFS transporter
Reads supporting (aligned to +/- strand): ref base A (120/153); new base T (9/6); total (133/159)
Fisher's exact test for biased strand distribution p-value = 2.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 292 total aligned reads displayed.

CGCCTTGTTGGCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCATGGGCGTGGGCGGTGCGC  >  NC_002947/3641247‑3641542

cGCCTTGTTGGCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCAt                                                                                                                                                    <  1:3757887/150‑1 (MQ=255)

  ccTTGTTGGCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCg                                                                                                                                                  >  1:2925014/1‑150 (MQ=255)

    ttgttgGCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGAGTGTCGCCAGCCGCGCCGGCATCGGc                                                                                                                                                >  1:5385616/1‑150 (MQ=255)

      gttgGCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCtt                                                                                                                                              <  2:3302635/150‑1 (MQ=255)

       ttgGCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTg                                                                                                                                             >  2:1705437/1‑150 (MQ=255)

         ggCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGc                                                                                                                                           <  1:4742161/150‑1 (MQ=255)

         ggCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGc                                                                                                                                           <  1:83961/150‑1 (MQ=255)

         ggCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGc                                                                                                                                           <  2:3948999/150‑1 (MQ=255)

             ccgcTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGaa                                                                                                                                       <  1:5692082/150‑1 (MQ=255)

             ccgcTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGaa                                                                                                                                       >  2:5417554/1‑150 (MQ=255)

                cTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCTTCGGCCAAGCCGATGcc                                                                                                                                    <  1:6621540/150‑1 (MQ=255)

                 tGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCg                                                                                                                                   <  1:6197083/150‑1 (MQ=255)

                 tGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCg                                                                                                                                   <  1:313872/150‑1 (MQ=255)

                    ccGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGca                                                                                                                                >  2:1559771/1‑150 (MQ=255)

                    ccGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGca                                                                                                                                <  2:2614894/150‑1 (MQ=255)

                    ccGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGca                                                                                                                                <  2:1643840/150‑1 (MQ=255)

                           gtTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGAc                                                                                                                         <  2:2551331/150‑1 (MQ=255)

                              ggCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTg                                                                                                                      <  1:3668755/150‑1 (MQ=255)

                               gCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGt                                                                                                                     <  1:5469448/150‑1 (MQ=255)

                               gCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGt                                                                                                                     >  2:1486731/1‑150 (MQ=255)

                               gCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGt                                                                                                                     >  2:6873149/1‑150 (MQ=255)

                               gCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGt                                                                                                                     >  2:2827188/1‑150 (MQ=255)

                               gCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGGTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGAGTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGt                                                                                                                     >  1:4868754/1‑150 (MQ=255)

                                cAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGtt                                                                                                                    <  2:1344280/150‑1 (MQ=255)

                                 aGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTg                                                                                                                   <  2:1964215/150‑1 (MQ=255)

                                 aGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTg                                                                                                                   >  2:4512605/1‑150 (MQ=255)

                                           gggCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTg                                                                                                         >  2:4607200/1‑150 (MQ=255)

                                            ggcggcGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGa                                                                                                        <  1:5191951/150‑1 (MQ=255)

                                               ggcgAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATgg                                                                                                     <  2:4243058/150‑1 (MQ=255)

                                               ggcgAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATgg                                                                                                     <  1:186192/150‑1 (MQ=255)

                                                 cgAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGt                                                                                                   <  2:222088/150‑1 (MQ=255)

                                                 cgAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGt                                                                                                   <  1:308359/150‑1 (MQ=255)

                                                   aGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGa                                                                                                 <  2:2699178/150‑1 (MQ=255)

                                                    gCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGac                                                                                                >  2:4775799/1‑150 (MQ=255)

                                                       ctgctgctgGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGactac                                                                                             <  2:1792440/150‑1 (MQ=255)

                                                        tgctgctgGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGactact                                                                                            >  2:372602/1‑150 (MQ=255)

                                                        tgctgctgGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTCGCACCACGCTGATGGGTGactact                                                                                            >  1:130827/1‑150 (MQ=255)

                                                           ggctgGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCg                                                                                         >  2:3552175/2‑150 (MQ=255)

                                                             ctgGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGAc                                                                                       <  1:943440/150‑1 (MQ=255)

                                                              tgGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACg                                                                                      >  1:5294896/1‑150 (MQ=255)

                                                               ggCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACgg                                                                                     >  2:5248096/1‑150 (MQ=255)

                                                                  gAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCa                                                                                  <  1:5540379/150‑1 (MQ=255)

                                                                  gAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCa                                                                                  <  1:767460/150‑1 (MQ=255)

                                                                       tGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGcc                                                                             <  1:4275986/150‑1 (MQ=255)

                                                                           gCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGgc                                                                         >  1:6862456/1‑150 (MQ=255)

                                                                           gCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGgc                                                                         <  2:1598980/150‑1 (MQ=255)

                                                                           gCTCTACAGCCGGTGCGGTTTGTTGCCGTTGTGGCTGGACGCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGCCCTGGTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGgc                                                                         <  2:5725481/150‑1 (MQ=255)

                                                                             tctACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCgg                                                                                                                                  >  1:2800041/1‑91 (MQ=255)

                                                                               tACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCgg                                                                     >  1:2091560/1‑150 (MQ=255)

                                                                               tACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCgg                                                                     >  2:3473810/1‑150 (MQ=255)

                                                                               tACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCgg                                                                     >  1:2752597/1‑150 (MQ=255)

                                                                                 cAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGgtt                                                                   <  1:1653214/150‑1 (MQ=255)

                                                                                 cAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGgtt                                                                   >  2:5009010/1‑150 (MQ=255)

                                                                                    ccTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGgttgtt                                                                <  1:1490624/150‑1 (MQ=255)

                                                                                     cTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTc                                                               <  2:3392189/150‑1 (MQ=255)

                                                                                       gtgCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGc                                                             <  2:4900669/150‑1 (MQ=255)

                                                                                         gCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGAGTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGGTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCtt                                                           <  2:5470476/150‑1 (MQ=255)

                                                                                          cGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCCGCATCATGACCAGTTGCACCACGCAGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGGTGTTAGCttt                                                          >  1:4627003/1‑150 (MQ=255)

                                                                                            gTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGc                                                        <  1:4214360/150‑1 (MQ=255)

                                                                                              ttgttgCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAg                                                      >  2:1865130/1‑150 (MQ=255)

                                                                                                gttgCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGAt                                                    >  2:1426457/1‑150 (MQ=255)

                                                                                                 ttgCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCGTTGCAGAtg                                                   >  1:641690/1‑150 (MQ=255)

                                                                                                   gCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGAtggt                                                 <  1:1406640/150‑1 (MQ=255)

                                                                                                    ccGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGAtggtg                                                <  1:2645384/150‑1 (MQ=255)

                                                                                                      gTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATggtggt                                              >  2:5662348/1‑150 (MQ=255)

                                                                                                       gtgtgGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTc                                             <  2:82932/149‑1 (MQ=255)

                                                                                                            gCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCACCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTc                                        >  1:3465730/1‑150 (MQ=255)

                                                                                                              tGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTTGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGTCGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCAt                                      <  1:2904078/150‑1 (MQ=255)

                                                                                                                gACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTg                                    <  2:4104872/150‑1 (MQ=255)

                                                                                                                  cTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTggc                                  <  1:5947902/150‑1 (MQ=255)

                                                                                                                  cTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTggc                                  >  2:1165582/1‑150 (MQ=255)

                                                                                                                   tCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTggcg                                 >  2:6080355/1‑150 (MQ=255)

                                                                                                                   tCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTggcg                                 >  2:3232111/1‑150 (MQ=255)

                                                                                                                     gCTGGTGCTGATTGTCGCCAGCCGCGCCGGCAACGGCGTGGCCGAAGCCGGCATCAAGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCCGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCGCATTggcggc                               >  1:1246528/1‑150 (MQ=255)

                                                                                                                      cTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTggcggcg                              >  2:3041111/1‑150 (MQ=255)

                                                                                                                         gTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCCGCATCATGACCTGTTGCACCACCCTGATGGGTGACTACTTAGACGGCCAGCGCCGGGCGCGGTTGTTCGCATTTCAGATGGTGGTCACCACAATTgcggcggcg                           >  1:6309334/1‑150 (MQ=255)

                                                                                                                          tGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCgt                          <  2:91631/150‑1 (MQ=255)

                                                                                                                           gCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCgtt                         <  2:6491733/150‑1 (MQ=255)

                                                                                                                           gCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGGTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCgtt                         >  1:5950450/1‑150 (MQ=255)

                                                                                                                             tGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCgttgt                       >  2:1016119/1‑150 (MQ=255)

                                                                                                                              gATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCgttgtt                      <  1:5053732/150‑1 (MQ=255)

                                                                                                                              gATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCgttgtt                      <  2:611865/150‑1 (MQ=255)

                                                                                                                              gATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGGTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCgttgtt                      >  1:3812119/1‑150 (MQ=255)

                                                                                                                                 tGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAt                   <  2:4947337/150‑1 (MQ=255)

                                                                                                                                 tGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAt                   <  2:6719538/150‑1 (MQ=255)

                                                                                                                                  gTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCGGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAtg                  <  2:2469495/150‑1 (MQ=255)

                                                                                                                                   tCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAtgg                 <  1:1559771/150‑1 (MQ=255)

                                                                                                                                   tCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAtgg                 <  1:266999/150‑1 (MQ=255)

                                                                                                                                   tCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAtgg                 <  1:2244928/150‑1 (MQ=255)

                                                                                                                                   gcGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCCCGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGGTCGCTTTGCAGAGGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAtgg                 <  2:5385616/149‑1 (MQ=255)

                                                                                                                                      ccAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGt                                                                                                   >  2:6201759/1‑65 (MQ=255)

                                                                                                                                      ccAGCCGCGCCGGCAACGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCAGATGGGTGACTACATCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCAATGGCGGCGGCGTTGTTCAtgggcg              >  1:4997622/1‑150 (MQ=255)

                                                                                                                                            gcgcCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAtgggcgtgggcg        >  1:1964731/1‑150 (MQ=255)

                                                                                                                                            atgcCGGCTTCGGCCAAGCCGATGCCGGCGTCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCAtgggcgtgggcg        >  1:6101240/3‑150 (MQ=255)

                                                                                                                                             cgcCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCATGGGCGTGGGCgg       >  2:2808287/1‑150 (MQ=255)

                                                                                                                                              gcCGGCTTCGGCCAAGCCGATGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGgttgtt                                                                >  1:4401156/1‑92 (MQ=38)

                                                                                                                                              gcCGGCTTCGGCCAAGCCGATGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGgttgtt                                                                <  2:4401156/92‑1 (MQ=38)

                                                                                                                                               ccGGCTTCGGCCAAGCCGATGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCATGGGCGTGGGCGGTg     >  2:5607062/1‑150 (MQ=255)

                                                                                                                                               ccGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCATGGGCGTGGGCGGTg     <  1:340568/150‑1 (MQ=255)

                                                                                                                                                  gCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCATGGGCGTGGGCGGTgcgg  >  2:4454093/1‑149 (MQ=255)

CGCCTTGTTGGCGCCGCTGGCCGGGGTGTTGGCAGACCGAGTGGGGCGGCGAGCACTGCTGCTGGCGAGCATGTTGCTCTACAGCCTGTGCGGTTTGTTGCCGTTGTGGCTGGACTCGCTGGTGCTGATTGTCGCCAGCCGCGCCGGCATCGGCTTGGCCGAAGCCGGCATCATGACCTGTTGCACCACGCTGATGGGTGACTACTTCGACGGCCAGCGCCGGGCGCGGTTGTTCGCTTTGCAGATGGTGGTCACCTCATTGGCGGCGGCGTTGTTCATGGGCGTGGGCGGTGCGC  >  NC_002947/3641247‑3641542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`