| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,781,374 | G→C | 7.8% | intergenic (+64/‑79) | PP_3338 → / → PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,781,374 | 0 | G | C | 7.8% | 384.5 / 4.4 | 176 | intergenic (+64/‑79) | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (79/75); new base C (2/13); total (81/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.72e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
GCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGA > NC_002947/3781225‑3781522 | gCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCTGCg > 1:4797818/1‑150 (MQ=255)gCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCg > 1:5623694/1‑150 (MQ=255)gCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCg > 2:2429374/1‑150 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGaga > 1:2395618/1‑148 (MQ=255) ggAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACaaaaa < 1:914171/150‑1 (MQ=255) ggAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACaaaaa < 2:3644446/150‑1 (MQ=255) aGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTTGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGTTGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc < 1:5505822/150‑1 (MQ=255) aGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc < 1:6778617/150‑1 (MQ=255) gCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcg < 2:4705786/150‑1 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGCCAAAAAGgcgccc > 1:2975187/1‑148 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGGCAAAAAGGCGcac > 2:684482/1‑150 (MQ=255) aGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcacca < 1:4152624/150‑1 (MQ=255) gccgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGCCAAAAACGCGcccccacg > 1:2575766/1‑146 (MQ=255) gccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGGGCCCAAAAAGCGcccccccgacc > 1:755140/1‑143 (MQ=255) gccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCAGCGCCAAAAAGGCGCACCACCGAAc > 2:3318446/1‑150 (MQ=255) gccCCAGAGCCAAGGCATCATGCAGGTAGGCACACTTTACATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATAGAGCCCTCGCCGTGGGGCGCCAGCGAAAAAAAGGCGCACCACGGAAc > 2:3318514/1‑150 (MQ=255) ccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGACAAAAAAGCGCACCACCGAACGTg > 1:4817363/1‑150 (MQ=255) cAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACCGAAcaagt > 2:3664763/1‑146 (MQ=255) ccATGGCTTCTTGGTGGTTGGAACCCTTTTCCTCGTGCCCTGTTCGGTTGGCTTTTCCTACTGTTCTTGCGGGCCGCCGGCATGCGCCGCCTTTGCGCCCGCGCGGGGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGc < 2:142486/150‑1 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGGCGCACCCCGGAACATGTACAGc > 1:2805365/1‑150 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGGCGCACCACCGAACTTGTACAGc > 1:6778474/1‑150 (MQ=255) tCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGGCAAAAAAGCGCACCACGCAACGAGTACACCCCGCAACg > 2:1302005/1‑150 (MQ=255) gtgttAGGCACCCTGTTCATCCGGCCCAGTTCGTTTGGCTGACCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGc < 1:5632333/146‑1 (MQ=255) cTGGTAGGCACACTTTACATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCCCAGCCATTGAGCCCACGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGc < 2:5651183/150‑1 (MQ=255) tGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACCGCACATGTACAGCCCGCCACGGATGCg > 2:2758293/1‑150 (MQ=255) ggTAGGCACACTGTTCATCCTGCCCTGTTCGCTTGGCTGAGCCGAGTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCgg < 2:4052992/150‑1 (MQ=255) gCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCAAAAAGGCGCACCCCGGCCCTTGTAAAGCCCGCCACGGGTGCGGcggga > 2:4037812/1‑146 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGGACATTTAAAGCCCGCAAACGGTTCGGCGTAAt > 2:1189352/1‑150 (MQ=255) cacaCTGTTCAGCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCAGGCTGGCCGCCGGCATGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAAt < 2:2242925/150‑1 (MQ=255) acacTGTTCTTCCGGCCCTTTTGGCTTGGCTGATCCGACTGTTCATGTTGGCCGCCGGCATGCGCAGCATTTGAGCCCTCGCCTTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATg < 2:4755101/150‑1 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAATGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATg > 2:6768032/1‑150 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCAAAAAGGGGCACCACCGCACATGTAAAGCCCCCAACCGATGCGGCGTAATg > 2:1679972/1‑150 (MQ=255) tGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAAGCGCACCACCGAACATGTACAGCCCCCAACCGATGCGGCTTAAAtcgcg > 2:958855/1‑150 (MQ=255) tGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACCGAAAATGTACAGCCCGCAACGGATGCGGCTTAATgcgcg > 2:3866792/1‑150 (MQ=255) gTTCAGCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcgcgc < 2:6731676/150‑1 (MQ=255) acccggCCCTGTTCGCTGGGCTGAGCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCAATTGAGCCCGCGCGGGGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCata < 2:6396377/145‑1 (MQ=255) aTCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCTGCGGCAAAAAGGCGCACCACGGGACTTGTACAGCCCGCAACCGATGCGGCTTAATGCGCGCCaat > 2:554356/1‑148 (MQ=255) ctccccAGTTCGCTTGGCTCACCCGACGGTACAGGATGGCCGCCGGCATGCCCAGCAATTGAGCCCTCGCCGGGGGGCGCCTGCCACAAAAAGCCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTc < 1:4569999/147‑1 (MQ=255) tGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCCTATTCg > 2:6535870/1‑150 (MQ=255) tGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGAACATGTACAGCCCGCAACGGATGCGGCGTAAAGCGCGCCATAttag > 2:2828871/1‑148 (MQ=255) cccgTTCGCTTGGCTGAGCCTACTTTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTc < 2:4181602/147‑1 (MQ=255) ccAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTc < 2:6285895/150‑1 (MQ=255) ccAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTc < 2:6285884/150‑1 (MQ=255) cAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCAAAAAAGCCCCCCACCGCACATGTACAGCCCGCCACCGATGCGGCGGAAAGCGCGCCCAATTAGCTCg > 1:3873134/1‑150 (MQ=255) ttttCGCTTGGATTATCCTACTTTTCTTGTTGGCCGCGGGCTTGCGCAGCATTTGAGCCCTCGCGGTGGTGCGCCTGCCAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCgg < 1:3246548/148‑1 (MQ=255) aGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCGGCGACAAAAAAGCGCCCCACCGAACTTGTACAGCCCCCAACGGAGGCGGCGTAATGCGCGCCCTATTAGGTCgg > 1:2699179/1‑150 (MQ=255) tttCGCTTGGCTGATCCGACTGTCATTGATGGCCGCGGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCggg < 2:2938275/149‑1 (MQ=255) ttCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGGCAAAAAGGGGCCCCAACGAACGAGTACAGCCCGCAACCGATGCGGCTTAATTCGCGCCCTATTCGCACGGGt > 2:722941/1‑150 (MQ=255) cGCTTGGCTTACCCGACTGTTCAGGCGGGCCGCCGGCAGGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAACGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGa < 2:5770233/150‑1 (MQ=255) gCTGGGCTGAGCCGAGTGTTCATGCGGGCCGCCGGCTTGCGCAGCCATTGCGCCCGCGCGGTGGGGCGCCTGCCACAAACCGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 2:2283442/150‑1 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCCCCACGGAACTTGTACAGCCCGCAAAGGATGCGGCTTAATGCGCGCCAAATTCGCTCGGGTGACTc > 2:526823/1‑150 (MQ=255) tgggCTGTTCCGCCTGTTCCTGAGGGCCGCCGGCTTGCGCAGCCTTTGCGCCCTCGCGGTGGGGCGCCTGCGCCAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTc < 2:6428565/148‑1 (MQ=255) gggtgttCCGAGTGTTCCTGCGGGCCGCCGGCATGCGCCGCAATTGCCCCCGGGCGGTGGTGCGCCCGCCAAAAAACGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCAt < 1:2540838/144‑1 (MQ=255) ggATCCGACTGTTCATGCGGGCCGCCGGCATGCGCAGCCATTGAGCCCGCGCCGTGGTGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCt < 2:6036892/149‑1 (MQ=255) cgccTGTTCATGTTGGCCGCCGGCAGGCCCAGCCATTGAGCCCGCGCCGGGGGGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 2:325056/147‑1 (MQ=255) cGACTGTTCTTGTGGGCCGCGGGCCGGCGCCGCCTTTGCCCCCCCGCGGGGGGGCGCCGGCCACAAACCGGCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 1:3159216/150‑1 (MQ=255) ttCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAAAATGAAAAGACCGCAACGGAAGCCCCTTAAAGCGCGCCAAATTAGCTCGGGTGACCAATGCATAcaccagcac > 2:6263151/1‑150 (MQ=255) tCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCACCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcacgtgcacg > 1:1830847/1‑150 (MQ=255) cATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCCAAAAGGCGCCCCCCCGGCCTAGTAAAGCCCCCAACGGCTGCGGCGTAATGAGCGCCAAAAAAGCTCGGGGGGCGCATGCGTTgacgggcaccg > 2:2391283/1‑148 (MQ=255) atgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCCCCACCGAACTTTTACAGCCCCCAACCGATGCGGCTTAATGCGCGCCAAATTCGCTCGGGTGTCTCATTCTTTaacgtgcacgtg > 1:4506306/1‑150 (MQ=255) tgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTTCGCCTTCGGCAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCCGCTTTATGCGCGCCATATTCGCTCGGGTGACTCATGCGGTCacgtgcacgtgc > 2:5701305/1‑150 (MQ=255) atgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACgtgcacgtgcac < 2:6652914/150‑1 (MQ=255) ccgccgGCTTGCGCAGCATTTGAGCCCTGGCGGTGTTGCGCCTGCTAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCt < 1:1531081/150‑1 (MQ=255) cgccgGCATGCGCAGCAATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCtt < 2:1384629/150‑1 (MQ=255) gcgggCTTGCGCTGCCTTTGAGCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:1710708/147‑1 (MQ=255) gccgGAATGCGCAGCATTTTCGCCCTCGCGGTGTTGCGCCTGCTACAAAATGGCGAACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:5313260/150‑1 (MQ=255) ccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTg < 2:5022369/150‑1 (MQ=255) gggCTTGCCCAGCATTTGCGCCCTGGCGGTGGTGCGCCTGCCAAAAAACGGCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 1:3525141/149‑1 (MQ=255) cggctggcgcAGCCTTTGACCCCTCGCGGGGGTGCGCCTGCGAAAAACCGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 1:2029030/144‑1 (MQ=255) cggctggcgcAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:5211215/144‑1 (MQ=255) cgGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGACAAAAAGGGGCACCACCGGACATGTACAGCCCCCCACGGCTGCGGCTTAATGCCCGCCATATTCGCTCGGGTGCATCCGGCGTTCACGTGCACGTGCACATCTTTGt > 2:4394348/1‑150 (MQ=255) gcttGCGCTGCATTTGAGCCCTGGCGGTGGGGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 1:2065832/147‑1 (MQ=255) tGCGCCGCCTTTGCCCCGTCGCGGGGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGtt < 1:6563500/150‑1 (MQ=255) gcgcCGCCATTGAGCCCGCGCCGTGGTGCGCCTGCTAAAAAAAGGCGAACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTc < 2:1840756/150‑1 (MQ=255) gcgcAGCCATTGCGCCCTCGCGGTGGTGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTc < 2:255003/150‑1 (MQ=255) gcgcAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACCGAACGTGTACAGCCCCCAACCGATTCGGCTTAAAGCGCGCCAAATTCGCTCGGGTGGCTCATGCTTTAACGTGCACGTGCACAAATTTTTCTGTTc > 2:2161838/1‑150 (MQ=255) agcatttGCGCCCTCGCGGTGGTGCGCCTGCCACAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcct < 1:3664763/145‑1 (MQ=255) ctttGCGCCCTCGCGGTGGTGCGCCTGCCAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgcc < 1:5391068/148‑1 (MQ=255) cgCCCTCGCGGTGGTGCGCCTGCTAAAAAAAGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 1:1796599/149‑1 (MQ=255) aGCCCTCGCCGGGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 2:4610695/150‑1 (MQ=255) cccTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGt < 2:3931456/150‑1 (MQ=255) cccTCGCCGTGGTGCGCCTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGt < 1:5546765/150‑1 (MQ=255) ccTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTg < 2:3065100/150‑1 (MQ=255) cTCGCGGTGGTGCGCTTGCGACAAAAAGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGc < 1:6467477/150‑1 (MQ=255) tCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCt < 2:2631755/150‑1 (MQ=255) tCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCt < 1:6297695/150‑1 (MQ=255) gtggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCa < 1:5061231/150‑1 (MQ=255) tggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa < 2:2716931/150‑1 (MQ=255) tggggCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGGTCGCCTGCCTCGCCGTGCTGTTCaa < 2:1179505/150‑1 (MQ=255) gcgcCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctg > 2:833114/1‑150 (MQ=255) ccTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgctg > 2:2347376/1‑150 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg > 2:1014248/1‑150 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg > 2:3817131/1‑150 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 2:6309929/150‑1 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg > 2:6107627/1‑150 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg > 1:4066798/1‑150 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg > 2:5027782/1‑150 (MQ=255) tGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGc > 2:6265515/1‑150 (MQ=255) tGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGGTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGc > 2:864625/1‑150 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc > 2:5138206/1‑87 (MQ=255) | GCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGA > NC_002947/3781225‑3781522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |