| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,084,441 | A→T | 6.0% | intergenic (‑252/+132) | sdaC ← / ← amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,084,441 | 0 | A | T | 6.0% | 661.3 / 23.4 | 215 | intergenic (‑252/+132) | sdaC/amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (90/109); new base T (6/7); total (98/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.45e-01 | |||||||||||
Only 100 of 217 total aligned reads displayed.
GTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCA > NC_002947/4084294‑4084588 | ttGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc < 1:3234884/150‑1 (MQ=255) tGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCg < 2:6323335/150‑1 (MQ=255) cACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 1:2040119/150‑1 (MQ=255) aCTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCAATTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCTGGCGTGCCGAAACGGCCGCCAAgccgcc > 2:30701/1‑150 (MQ=255) cTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGccc < 2:3970455/150‑1 (MQ=255) ttGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGCTCGGGCCGCCCAGCGGcccc > 2:4283287/1‑150 (MQ=255) gCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGGTAGGGCCGCAAAGCGGCCCCAg > 2:5634189/1‑150 (MQ=255) aaGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATGGGGCCGCTTTGCGGccctatcgc < 2:14904/150‑7 (MQ=255) aaGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCaa < 1:4015984/150‑1 (MQ=255) aGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCaaa > 2:1076597/1‑136 (MQ=255) aGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCaaa < 1:1076597/136‑1 (MQ=255) cccTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAttt < 2:4039049/150‑1 (MQ=255) tttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGTAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc < 2:3896270/150‑1 (MQ=255) tttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc < 1:2947989/150‑1 (MQ=255) tttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc < 1:5927178/150‑1 (MQ=255) ccGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGc < 1:1896065/150‑1 (MQ=255) gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGGGGGGGGCGCGGGAGGGGCGCCACGCGGCCCCCCGCAGTTCAGCGGccc > 1:4175172/1‑148 (MQ=255) ggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCAATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAg < 1:3199779/150‑1 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg < 1:1065173/150‑1 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg < 2:2820893/150‑1 (MQ=255) cGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGGGCGGCGGGGTTTGGCCGCCAAGCCGCCCCAGCCAATACAGCGGCacaccggc > 1:2148694/1‑143 (MQ=255) ttGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCCGCCCCACCCAATTACGCGGCCAAGCTGCaca > 2:5164695/1‑148 (MQ=255) tGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATc < 2:2746413/150‑1 (MQ=255) gCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCg < 1:2350421/150‑1 (MQ=255) cACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGGGCGTCGCGCTAGGGGCGCCACGCGGCCCCCGCCAATGCAGCGGCCAAGCAGCCATAGt > 1:3399772/1‑150 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCCTTCGGCGCCATAGGGCCGCCAAACCGCCCCCCCCAAGTAAGCGGCCAAGCGGCaaaagtt > 2:1691966/1‑145 (MQ=255) cTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAg < 1:1481015/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCACTCTCAGCGGCAAAGCTGCAATCGTAgg > 2:6848219/1‑150 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCGCAAATACAGCGGCAAAGCAGCCAAAGTAgg > 1:4462883/1‑150 (MQ=38) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 1:4816454/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCAACGCGGCCCCCGCCAATTCAGCGGCAACGCGGCAAGCGTCgg > 2:6866602/1‑150 (MQ=255) gTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgggg < 2:3244821/150‑1 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGgcgc < 1:2347932/150‑1 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGgcgc > 2:5936722/1‑150 (MQ=255) tACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTc < 2:742395/150‑1 (MQ=255) tACAAGCGGAAGGCAGTGCGGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTc < 2:1331872/150‑1 (MQ=255) gctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTc < 1:6445279‑M1/83‑1 (MQ=255) aCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGGGTCGGGATAGGGGCGCAAAGCGGCCCCAGCAAAGTGAGCGGCCAAGCAGCAAACGGAGGGGCGCGcc > 1:6623905/1‑150 (MQ=255) aCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCCGCCCCCGCAAATTAAGCGGCAAAGCTGCCAACGGAGGGGCGCGcc > 2:3466395/1‑150 (MQ=37) aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAAGGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGGAGGGGCGCTCCGc > 2:2091781/1‑150 (MQ=255) ccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCa > 1:4518094‑M1/64‑150 (MQ=255) gCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCAc < 1:5502579/150‑1 (MQ=255) ggAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCAccc < 1:3782727/150‑1 (MQ=255) aaGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCGCAAATTCACCGGCACAGCGGCAATACTAGGGGCGCACCGCAcccag > 1:2831275/1‑148 (MQ=38) aGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCttt < 2:2396743/150‑1 (MQ=255) aagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTc > 1:3042793‑M1/56‑150 (MQ=255) cATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTcg < 1:620508/150‑1 (MQ=255) agtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTcg > 1:95496‑M1/55‑150 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCGATACGGCCGCAAAACGGCCCCCGCAAAATAAGCGGCAAGGCTGCAATAGGTGGGGCGCACCGCACCCATTTagc > 2:4593577/1‑150 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTAGCGATAGGGCCCCAAAGCGGCCCCAGCAATTTCAGCGGCAAACATGCAATCGTAGGGGCGCTCCGCACCCATTTcgc > 2:5540482/1‑150 (MQ=255) aactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGCAAAGCGTCCCCAGCAATTTAATCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTtttcgaga > 2:5094589‑M1/52‑147 (MQ=255) cTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGc > 2:4086897/1‑96 (MQ=255) tGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCCCAAAGCGGCCCCACCAAATTAAGCGGCCAAGCAGCAAACGTAGGGGCGCTCCGCACCCATTTCGCGAccc > 2:4414566/1‑148 (MQ=37) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTAATAGGCAAAGCTGCAATAGTAGGGGCGCTCCGCACCCTTTTAGCGACGCaa > 2:6825982/1‑150 (MQ=38) tgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAg < 1:5234599/150‑1 (MQ=255) caacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAgg > 2:5119656‑M1/45‑150 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGc < 2:5458516/150‑1 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCGGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGc < 1:1683983/150‑1 (MQ=255) gATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGATAGGGCCCCCAAGCGGCCCCAGCAAATTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCGTTTCGCGACGCAAGGCCg > 2:6233201/1‑150 (MQ=255) ttgtcggggCCGGGGCGCCTTTGGGGCGGCGTGTGGGCGCGGCCTTGCGTCGCTTTGGGGCCGCAAAGCGGCCCCAGCATTTTCCGGGGAAATGCTGAAATCGTCGGGGGGCGCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACaaa < 2:3168817/143‑1 (MQ=21) aggTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTCGGGGCGCTCCGCACCCTTTACGCGAGGCAAGGCCGCTCCCACaaa < 2:5056648/148‑1 (MQ=255) aTGTAGGGGCGTGGGGGCGTGTGGGGGGGCCTGTGGGAGGGGCGTTGGGTCGCGATTGGGCCGAAAAGCGGCCCCAGCAATTTCAGCGTCAAAGCTGAATTCGTAGGGGCGCTCCGCACCATTTTCGCGACGAATGGCCGCTCCCACaaa < 2:6593405/150‑1 (MQ=255) aTGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGTGCGGCCTTGGGTCGCGATTGGGCCGCAAAGGGGCCCCTGCAATTTCAGCGGCAATGCTGCAATCGTTGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACaaa < 2:4986994/150‑1 (MQ=37) tAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGCCTCGCGCAAGGGCCGCCAAGCCGCCCCAGCAAATTAAGCGGCCAAGCAGGAAACGTAGGGGGGCGCCGCCCCCCTGTCGCGACGCAAGGCCGCGCCCCCAAACTc > 2:3460043/1‑150 (MQ=19) cggggCGTGGGCGCTGTTGGGGCGGCGTTTGGTTGCGGCCTTGGGTCGCGTTCGGGCCGCAACGCGGCCCCAGCATTTTCCGCGCCAAAGCTGCAAGGTTTGGGGCGCTCGGCACCATTTGCGCGCCGCACGGCCGCTCCCACAAAGTcc < 2:1923417/147‑1 (MQ=255) aGCGGCCGGGGCGCCTGTGGGGCGGCGTGTGGGCGCGGCCGTGCGTCGCGATCGGGCCGCAACGCGGCCCCAGCAATTTCAGCGGAAAAGCTGCAATCGTTGGGGCGCTCCGCACCCTTTCCGCCACGCATGGCCGCTCCCACAAAGTcc < 2:5414495/150‑1 (MQ=255) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCGCAATTTCAGCGGCAAAGCTGCGAACGTAGGGGCGCTCCGCACCCGTTTCGCGACGCAAGGCCGCGCCCACCAAGTCCa > 2:3347462/1‑150 (MQ=37) cTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCCCAAAGCCGCCCCCGCAAATTCACCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCGTTTCGCGACGCACGGCCGCTCCCACAAAGACCAAcccc > 2:4719046/1‑148 (MQ=25) cTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCCCAAAGCGGCCCCAGCAAATTAACCGGCAAAGCAGCCAAAGTAGGGGCGCTCCGCACCCATTTAGCCACGCAAGGCCGCTCCCACAAAGTACAAAcgc > 2:2654792/1‑150 (MQ=25) tGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAATTCATCGGCAAACCCTCAATCGTAGGGGCGCGCCGCACCCGGGTGCCGCCGCAACGCCGCTCCCCCAAAGCCCAACcccg > 2:3590439/1‑150 (MQ=25) tgtgGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGATAGGGCCGCAAAACGGCCCCAGCAAATTCAGCGGCAAATCTGCAATAGTAGCGGCGCTCCGCACCCGATTCCCGACGCAACGCCGCTCCCACAAACTCCAACCCCCCCCcccac > 2:4366211/1‑149 (MQ=25) gggCGGCCTGTGGGAGCGGCCTTGCGTCGCGATGGGGCCGCTTTGCGGcccta > 1:71187/1‑51 (MQ=17) gggCGGCCGGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAACGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACaggagg < 2:3814066/150‑1 (MQ=255) cTGTGGGAGCGGCCATGCGTCGCGATAGGGCCCCAAAGCGGCCCCAGCAAATTAAGCGGCAAAGCTGCAATAGTAGGGGCGCTCCCCACCCATTTAGCGACGCAAGGCCGCTCCCACAAAGTCCAAACCCGCCCCACCGGAGGGGCCGCa > 2:2049927/1‑150 (MQ=25) gGGGCGCGGCCTGGCGGCGCGATCGGGCCGCAAAGCGGCCCCAGCAAGTTCCGCGGAAAAGCTGCAATCGTCGGGGCGCGCCGCACCATTTCCGCGCCGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGtt > 2:3730366‑M1/2‑150 (MQ=255) TGGGAGCGGCCGTGCGCCGCGATCGGCCCGCAACGCGGCCCCTGAAATTTCCGCGGAAAAGCTGAAATCGTCGGGGCGCTCCCCACCCTTTTCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGtt > 2:618351‑M1/1‑150 (MQ=255) AGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAATTCAGCGGCAAAGCTGCAATAGTAGGGGCGCTCCGCACCCAATTCGCGACGCAAGGCCGCTCCCACAAAGACCAACCCCGCCCCACCGGAGGGGCCGCAGTTGGcc < 1:4803148‑M1/150‑1 (MQ=255) CGGCCTTGCTTCGCGATAGGGCCGAAAAGCGGCCCCACCAATTTCAGCGGCAAAGCTGCAATCGTCGGGGCGCTCCGCACCATTTTCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCg > 2:1815935‑M1/1‑150 (MQ=255) GCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa > 2:4462883‑M1/1‑150 (MQ=255) GCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa < 1:2494383‑M1/150‑1 (MQ=255) GTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGt < 2:2957026‑M1/150‑1 (MQ=255) GTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCAGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGt < 2:5145824‑M1/150‑1 (MQ=255) TCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGtt < 2:6006776‑M1/150‑1 (MQ=255) GCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTAc < 2:1231914‑M1/150‑1 (MQ=255) GATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGTGGGGCCCCGGT‑GGCCCGTTGGCGAGTTACTTc < 2:4536711‑M1/150‑1 (MQ=255) GATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACtt < 1:565348‑M1/150‑1 (MQ=255) GATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACtt < 2:787106‑M1/150‑1 (MQ=255) GATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACtt < 1:6813542‑M1/150‑1 (MQ=255) GATAGGGCCGAAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTCGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACtt > 2:2928206‑M1/1‑150 (MQ=255) ATAGGGCCGCAACGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTc > 2:2148694‑M1/1‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:5997969/3‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:3500580/3‑150 (MQ=255) ggggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa > 1:4311129/2‑140 (MQ=255) ggggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa < 2:4311129/139‑1 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGccc > 2:5704230/1‑130 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa > 1:1343845/1‑150 (MQ=255) gCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAAc > 2:5308024/1‑150 (MQ=255) gCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAAc > 2:2474404/1‑150 (MQ=255) cGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg > 1:4385114/1‑150 (MQ=255) cGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg > 2:3681336/1‑150 (MQ=255) | GTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCA > NC_002947/4084294‑4084588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |