| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,084,451 | A→C | 7.0% | intergenic (‑262/+122) | sdaC ← / ← amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,084,451 | 0 | A | C | 7.0% | 557.6 / 4.3 | 205 | intergenic (‑262/+122) | sdaC/amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (80/101); new base C (20/2); total (101/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.17e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 208 total aligned reads displayed.
TGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCG > NC_002947/4084302‑4084600 | tGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCa < 2:4291747/150‑1 (MQ=255) aaGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCaa < 1:4015984/150‑1 (MQ=255) cccTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAttt < 2:4039049/150‑1 (MQ=255) ttttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAg < 2:3637602/150‑1 (MQ=255) tttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc < 1:5927178/150‑1 (MQ=255) aacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc > 2:1610788‑M1/95‑150 (MQ=255) ccGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGc < 1:1896065/150‑1 (MQ=255) cGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGCGGCGCGGTGGGGGCGCGAAGCGGCCCCCGCAAAGTCAGCGGCa > 1:1071783/1‑150 (MQ=255) gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGGGGGGGGCGCGGGAGGGGCGCCACGCGGCCCCCCGCAGTTCAGCGGccc > 1:4175172/1‑148 (MQ=255) ggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCAATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAg < 1:3199779/150‑1 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg < 2:2820893/150‑1 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg < 1:1065173/150‑1 (MQ=255) ttGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCCGCCCCACCCAATTACGCGGCCAAGCTGCaca > 2:5164695/1‑148 (MQ=255) tGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATc < 2:2746413/150‑1 (MQ=255) gCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCg < 1:2350046/150‑1 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCCTTCGGCGCCATAGGGCCGCCAAACCGCCCCCCCCAAGTAAGCGGCCAAGCGGCaaaagtt > 2:1691966/1‑145 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTa < 1:2066898/150‑1 (MQ=255) cTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAg < 1:1481015/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCGCAAATACAGCGGCAAAGCAGCCAAAGTAgg > 1:4462883/1‑150 (MQ=38) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCCAAGCAGCCATCGTAgg > 2:5806915/1‑150 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 2:4314769/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 1:4816265/150‑1 (MQ=255) gTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgggg < 2:3244821/150‑1 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGgcgc < 2:2851223/150‑1 (MQ=255) tACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTc < 2:742395/150‑1 (MQ=255) gctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTc < 1:6445279‑M1/83‑1 (MQ=255) aCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGGGTCGGGATAGGGGCGCAAAGCGGCCCCAGCAAAGTGAGCGGCCAAGCAGCAAACGGAGGGGCGCGcc > 1:6623905/1‑150 (MQ=255) aCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTcc < 1:2336697/150‑1 (MQ=255) aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAACCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCACCGc > 2:391497/1‑150 (MQ=255) aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAAGGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGGAGGGGCGCTCCGc > 2:2091781/1‑150 (MQ=255) ccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCa > 1:4518094‑M1/64‑150 (MQ=255) gCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCAc < 1:5502579/150‑1 (MQ=255) ggAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCAccc < 1:3782727/150‑1 (MQ=255) aaGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCGCAAATTCACCGGCACAGCGGCAATACTAGGGGCGCACCGCAcccag > 1:2831275/1‑148 (MQ=38) gCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTc < 2:3575208/150‑1 (MQ=255) gCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTc < 2:1452966/150‑1 (MQ=255) gCATTGCGGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTc < 2:5695926/150‑1 (MQ=255) aagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTc > 1:3042793‑M1/56‑150 (MQ=255) cATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTcg < 1:620508/150‑1 (MQ=255) agtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTcg > 1:95496‑M1/55‑150 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTAGCGATAGGGCCCCAAAGCGGCCCCAGCAATTTCAGCGGCAAACATGCAATCGTAGGGGCGCTCCGCACCCATTTcgc > 2:5540482/1‑150 (MQ=255) tGCTGGTGTCGATCGGTTGTATGTATCGGACTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGa < 2:6811518/150‑1 (MQ=255) aactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGCAAAGCGTCCCCAGCAATTTAATCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTtttcgaga > 2:5094589‑M1/52‑147 (MQ=255) cTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGc > 2:4086897/1‑96 (MQ=255) tGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCCCAAAGCGGCCCCACCAAATTAAGCGGCCAAGCAGCAAACGTAGGGGCGCTCCGCACCCATTTCGCGAccc > 2:4414566/1‑148 (MQ=37) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATATGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCATTTCGCGACGCaa > 2:6826116/1‑150 (MQ=255) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa < 2:5273139/150‑1 (MQ=255) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATATCAGCCGCCAAGCTGCAAACGAAGGGGCGCTCCGCGCCCATTTCGCGCCGCac > 2:6223292/1‑149 (MQ=38) gtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAgg < 1:2901617/150‑1 (MQ=255) caacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAgg > 2:5119656‑M1/45‑150 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGc < 2:6853111/150‑1 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGc < 2:5458516/150‑1 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCGGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGc < 1:1683983/150‑1 (MQ=255) ttgtcggggCCGGGGCGCCTTTGGGGCGGCGTGTGGGCGCGGCCTTGCGTCGCTTTGGGGCCGCAAAGCGGCCCCAGCATTTTCCGGGGAAATGCTGAAATCGTCGGGGGGCGCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACaaa < 2:3168817/143‑1 (MQ=21) aggTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTCGGGGCGCTCCGCACCCTTTACGCGAGGCAAGGCCGCTCCCACaaa < 2:5056648/148‑1 (MQ=255) aTGTAGGGGCGTGGGGGCGTGTGGGGGGGCCTGTGGGAGGGGCGTTGGGTCGCGATTGGGCCGAAAAGCGGCCCCAGCAATTTCAGCGTCAAAGCTGAATTCGTAGGGGCGCTCCGCACCATTTTCGCGACGAATGGCCGCTCCCACaaa < 2:6593405/150‑1 (MQ=255) aTGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGTGCGGCCTTGGGTCGCGATTGGGCCGCAAAGGGGCCCCTGCAATTTCAGCGGCAATGCTGCAATCGTTGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACaaa < 2:4986994/150‑1 (MQ=37) aTGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGGGGTAGGGCCCCCAATCGGCCCCAGCACTTTCAGCGGCAAAGCAGCCAGCGGTGGGGGGCGCCGCACCCGATTCGCGACGCGAGGCCGCACCcacaca > 1:6819468/1‑148 (MQ=255) tcgCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCCGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTc < 2:6299808/148‑1 (MQ=255) tAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGCCTCGCGCAAGGGCCGCCAAGCCGCCCCAGCAAATTAAGCGGCCAAGCAGGAAACGTAGGGGGGCGCCGCCCCCCTGTCGCGACGCAAGGCCGCGCCCCCAAACTc > 2:3460043/1‑150 (MQ=19) cggggCGTGGGCGCTGTTGGGGCGGCGTTTGGTTGCGGCCTTGGGTCGCGTTCGGGCCGCAACGCGGCCCCAGCATTTTCCGCGCCAAAGCTGCAAGGTTTGGGGCGCTCGGCACCATTTGCGCGCCGCACGGCCGCTCCCACAAAGTcc < 2:1923417/147‑1 (MQ=255) aGCGGCCGGGGCGCCTGTGGGGCGGCGTGTGGGCGCGGCCGTGCGTCGCGATCGGGCCGCAACGCGGCCCCAGCAATTTCAGCGGAAAAGCTGCAATCGTTGGGGCGCTCCGCACCCTTTCCGCCACGCATGGCCGCTCCCACAAAGTcc < 2:5414495/150‑1 (MQ=255) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCGCAATTTCAGCGGCAAAGCTGCGAACGTAGGGGCGCTCCGCACCCGTTTCGCGACGCAAGGCCGCGCCCACCAAGTCCa > 2:3347462/1‑150 (MQ=37) cTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCCCAAAGCGGCCCCAGCAAATTAACCGGCAAAGCAGCCAAAGTAGGGGCGCTCCGCACCCATTTAGCCACGCAAGGCCGCTCCCACAAAGTACAAAcgc > 2:2654792/1‑150 (MQ=25) tgtgGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGATAGGGCCGCAAAACGGCCCCAGCAAATTCAGCGGCAAATCTGCAATAGTAGCGGCGCTCCGCACCCGATTCCCGACGCAACGCCGCTCCCACAAACTCCAACCCCCCCCcccac > 2:4366211/1‑149 (MQ=25) gggCGGCCTGTGGGAGCGGCCTGGCGTCGCGATAGGGCCGCACCGCGGCCCCCGCAATTTCAGCGGCACAGCTGCAAGCGTCGGGGCGCCCCGCACCCTTTCCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACaggagg < 2:3814325/150‑1 (MQ=25) gggCGGCCTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCCCCCATTTCAGCGGCAAAGCTGCAATCGTAGGGGGGCTCCCCACCCATTTAGCGCCGCAAGGCCGCTCCCACCAACTCCAACCGCGCCCcacacgcgg > 2:5991930/1‑145 (MQ=25) gggCGGCCGGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAACGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACaggagg < 2:3814066/150‑1 (MQ=255) cTGTGGGAGCGGCCATGCGTCGCGATAGGGCCCCAAAGCGGCCCCAGCAAATTAAGCGGCAAAGCTGCAATAGTAGGGGCGCTCCCCACCCATTTAGCGACGCAAGGCCGCTCCCACAAAGTCCAAACCCGCCCCACCGGAGGGGCCGCa > 2:2049927/1‑150 (MQ=25) gGGGCGCGGCCTGGCGGCGCGATCGGGCCGCAAAGCGGCCCCAGCAAGTTCCGCGGAAAAGCTGCAATCGTCGGGGCGCGCCGCACCATTTCCGCGCCGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGtt > 2:3730366‑M1/2‑150 (MQ=255) TGGGAGCGGCCTTGCGTCGCGAGAGGCCCGAAACGCGGCCCCAGCAATTTCAGCGGAAAAGCTGCAATCGTCGGGGCGCCCCGCACCCTTTACGCGCCGCACGCCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGtt > 2:618323‑M1/1‑150 (MQ=255) CGGCCTTGCTTCGCGATAGGGCCGAAAAGCGGCCCCACCAATTTCAGCGGCAAAGCTGCAATCGTCGGGGCGCTCCGCACCATTTTCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCg > 2:1815935‑M1/1‑150 (MQ=255) GCGTCGCTATCGGCCCGCAACGCGGCCCCCGCAATTCCAGCGGCAACGCTGCAACCGTCGGGGCGCGCCGCACCCTTTCCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa > 2:2365174‑M1/1‑150 (MQ=255) GCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa < 1:2494383‑M1/150‑1 (MQ=255) GCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa > 2:4462883‑M1/1‑150 (MQ=255) GTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGt < 2:2956931‑M1/150‑1 (MQ=255) GTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCAGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGt < 2:5145824‑M1/150‑1 (MQ=255) GCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTAc < 2:1231914‑M1/150‑1 (MQ=255) GATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGTGGGGCCCCGGT‑GGCCCGTTGGCGAGTTACTTc < 2:4536711‑M1/150‑1 (MQ=255) GATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACtt < 2:787106‑M1/150‑1 (MQ=255) GATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACtt < 1:565348‑M1/150‑1 (MQ=255) ATAGGGCCGCAACGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTc > 2:2148694‑M1/1‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:5997969/3‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:3500580/3‑150 (MQ=255) ggggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa > 1:4311129/2‑140 (MQ=255) gggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGa > 2:4659641/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa > 1:1343845/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa > 2:2994087/1‑150 (MQ=255) cccGCAACGCGGCCCCAGCACTCCCACCCGCAAAGCGGCCCGCGGCGGGCCGCCCCGCACCCCTCCCCCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAAc < 1:3347462/149‑1 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 2:4816117/1‑150 (MQ=255) cGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg > 2:2472784/1‑150 (MQ=255) cGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg > 1:4385114/1‑150 (MQ=255) acgCGGCCCCAGAAATTTCAGCTCCAAAGCGGCAATCGTCGGGGCGCCCCCCACCCTCTCCCCCACCCACGCCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGc < 1:5345620/148‑1 (MQ=255) ccAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCtt > 1:4483426/1‑150 (MQ=255) ccAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCtt > 1:5820181/1‑150 (MQ=255) ccAGCAATGTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCtt < 2:772209/150‑1 (MQ=255) cAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc > 1:1979935/1‑150 (MQ=255) cAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTATCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGCGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc > 2:1329445/1‑150 (MQ=255) aGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCg > 1:5182238/1‑150 (MQ=255) aGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCg > 2:336253/1‑150 (MQ=255) | TGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCG > NC_002947/4084302‑4084600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |