| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,160,287 | A→G | 5.1% | F67S (TTC→TCC) | PP_3658 ← | aromatic compound MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,160,287 | 0 | A | G | 5.1% | 1015.8 / 25.5 | 311 | F67S (TTC→TCC) | PP_3658 | aromatic compound MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (162/133); new base G (7/9); total (169/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 314 total aligned reads displayed.
GCGCATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCATGAAA > NC_002947/4160139‑4160435 | gcATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACa > 2:4784869/1‑150 (MQ=255) aTGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAAt > 2:6559847/1‑150 (MQ=255) tGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATg > 2:1996733/1‑150 (MQ=255) tGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATg > 2:4935439/1‑150 (MQ=255) tGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATg > 1:3627017/1‑150 (MQ=255) aTACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTTCGGGACAATGCt < 2:1702978/150‑1 (MQ=255) aTACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCt < 1:1520487/150‑1 (MQ=255) aTACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCt < 2:3696530/150‑1 (MQ=255) cTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCTCAGCATTGTTCGGGACAATGCTggg < 1:1342197/150‑3 (MQ=255) tGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGagc < 1:4659008/150‑1 (MQ=255) tGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGagc > 2:3213419/1‑150 (MQ=255) tGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGagc > 1:5961808/1‑150 (MQ=255) tGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGagc < 1:6164/150‑1 (MQ=255) gTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGagccagcc < 2:1324768/150‑1 (MQ=255) cGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTAc < 2:740478/150‑1 (MQ=255) tGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTGTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCgg < 2:6599026/150‑1 (MQ=255) aGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCt > 2:5884022/1‑150 (MQ=255) gTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTg < 2:300269/150‑1 (MQ=255) gAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGt > 1:841604/1‑150 (MQ=255) aaCCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGtt < 2:6471385/150‑1 (MQ=255) cccTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGc < 1:2528789/150‑1 (MQ=255) cccTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGc < 2:5687515/150‑1 (MQ=255) cccTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGc > 1:591635/1‑150 (MQ=255) ccTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCg > 1:2456411/1‑150 (MQ=255) ccTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCg > 1:4043368/1‑150 (MQ=255) ccGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCaa < 1:729021/150‑1 (MQ=255) gCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAAtt > 1:22189/1‑150 (MQ=255) cAGCGGTGAAAACGCTGAACAGCGCTACACCGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAAttt > 2:53665/1‑150 (MQ=255) gCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGc < 1:4774442/150‑1 (MQ=255) gAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATc > 2:6074930/1‑150 (MQ=255) aaaaCGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCg > 1:6785138/1‑150 (MQ=255) gCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCat > 1:3845422/1‑150 (MQ=255) tGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCatga > 1:910795/1‑150 (MQ=255) gAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCatgat > 1:4507983/1‑150 (MQ=255) aaCAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCatgatg > 1:4947074/1‑150 (MQ=255) aCAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGAtgg < 2:5808134/150‑1 (MQ=255) aGCGCTACACCGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGAtggct > 2:3100013/1‑150 (MQ=255) tACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcag > 2:3396450/1‑150 (MQ=255) acacAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcagg < 1:1418472/150‑1 (MQ=255) acacAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcagg < 1:1802463/150‑1 (MQ=255) cacaGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcaggg < 2:1483045/150‑1 (MQ=255) cacaGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcaggg < 1:2147786/150‑1 (MQ=255) cacaGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcaggg < 1:3365679/150‑1 (MQ=255) caGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcagggca < 1:283357/150‑1 (MQ=255) aGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcagggcag < 2:6395917/150‑1 (MQ=255) aGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcagggcag > 1:6492303/1‑150 (MQ=255) aGATCGCGATCATGTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcagggcag < 1:5372590/150‑1 (MQ=255) gATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGc > 2:6222061/1‑150 (MQ=255) gcgATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGccccc > 2:677964/1‑150 (MQ=255) gATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCccac > 2:551515/1‑150 (MQ=255) gATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCccac > 2:2840300/1‑150 (MQ=255) tCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCccacca < 1:6666099/150‑1 (MQ=255) aTTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACt > 2:437066/1‑150 (MQ=255) aTTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACt < 1:3289585/150‑1 (MQ=255) ttttCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTg > 1:5066629/1‑150 (MQ=255) gccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTa < 2:4011722/150‑1 (MQ=255) gccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTa > 1:4228232/1‑150 (MQ=255) gccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTa < 1:3776106/150‑1 (MQ=255) gccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTa < 1:2688664/150‑1 (MQ=255) ccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAg > 1:4925251/1‑150 (MQ=255) ttCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCCCCACTGCCAAGTCGTAGCCAt < 2:2456411/150‑1 (MQ=255) tCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATa < 1:5804562/150‑1 (MQ=255) gCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATc > 2:178636/1‑150 (MQ=255) ccAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCa < 2:2177953/150‑1 (MQ=255) aaTGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGa > 2:3578070/1‑150 (MQ=255) tgtgCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGAGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAAt < 1:5160431/150‑1 (MQ=255) tgtgCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGAGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAAt < 1:4390087/150‑1 (MQ=255) gtgCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATc > 1:942534/1‑150 (MQ=255) gCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCaa < 1:551515/150‑1 (MQ=255) ccTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAac < 2:1804402/150‑1 (MQ=255) cTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAaca > 1:202507/1‑150 (MQ=255) cTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAaca > 2:4169298/1‑150 (MQ=255) cTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAaca < 1:1067713/150‑1 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAacac > 1:1605537/1‑150 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAacac > 2:4048731/1‑150 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAacac > 2:1910342/1‑150 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAacac > 1:3943029/1‑150 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAAGCAGAATCAacac > 2:5993375/1‑150 (MQ=255) aaaaaaaTAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATCATCAGACTCAACACg > 2:1219369/1‑150 (MQ=255) aaaaaaTAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGc > 2:1282261/1‑150 (MQ=255) aaaaaTAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCa < 1:6539479/150‑1 (MQ=255) aaaaaTAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCa > 2:5315357/1‑150 (MQ=255) aaaaTAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCAc < 1:1996733/150‑1 (MQ=255) gcgcCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaat > 1:2299225/1‑150 (MQ=255) gcCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatag < 1:3036502/150‑1 (MQ=255) tcAGCATTGTTCGGGACAATGCTGGGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatagaa > 2:5087117/2‑150 (MQ=255) tcAGCATTGTTCGGGACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatagaa > 1:6095939/2‑150 (MQ=255) ccAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGTTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatagaa < 2:6856573/150‑1 (MQ=255) ccAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatagaa > 2:4447354/1‑150 (MQ=255) ccAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatagaa < 1:1262122/150‑1 (MQ=255) aGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCcgaatagaaga > 2:4595981/1‑148 (MQ=255) gCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATaa < 1:2433072/150‑1 (MQ=255) gCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATaa < 2:1077244/150‑1 (MQ=255) cATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAg > 2:390906/1‑150 (MQ=255) ttGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTc > 1:4881968/1‑150 (MQ=255) tCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCAt > 1:3490101/1‑150 (MQ=255) tCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCAt > 1:3660304/1‑150 (MQ=255) cGAACCATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCAGATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCAGCGATCATCAGAATCAACACGCACCCGAATAGAGTCAGTcccgggc > 2:1605424/1‑145 (MQ=255) cGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCATGaa > 1:1955262/1‑150 (MQ=255) gAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCATGaaa < 1:632974/150‑1 (MQ=255) | GCGCATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCATGAAA > NC_002947/4160139‑4160435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |