Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,291,674 T→A 5.7% Q352L (CAG→CTG)  PP_3758 ← two component system response regulator/sensor histidine kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,291,6740TA 5.7% 900.2 / 24.8 262Q352L (CAG→CTG) PP_3758two component system response regulator/sensor histidine kinase
Reads supporting (aligned to +/- strand):  ref base T (136/111);  new base A (5/10);  total (141/121)
Fisher's exact test for biased strand distribution p-value = 1.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 278 total aligned reads displayed.

GGTCGTTTTGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTCGCCGTAACGCATT  >  NC_002947/4291525‑4291823
                                                                                                                                                     |                                                                                                                                                     
   cGTTTTGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCctgct                                                                                                                                                    <  1:3125663/150‑1 (MQ=255)
    gTTTTGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCctgctg                                                                                                                                                   <  1:437114/150‑1 (MQ=255)
      tttGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTggg                                                                                                                                                 <  2:3625985/150‑1 (MQ=255)
      tttGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTggg                                                                                                                                                 >  2:3050837/1‑150 (MQ=255)
      tttGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTggg                                                                                                                                                 <  2:211435/150‑1 (MQ=255)
           tCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGCCCAGCAGGCCAGCg                                                                                                                                            >  2:5064975/1‑150 (MQ=255)
             tttGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGAc                                                                                                                                          >  1:1068518/1‑150 (MQ=255)
             tttGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGAc                                                                                                                                          >  2:5597372/1‑150 (MQ=255)
             tttGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGAc                                                                                                                                          >  2:1793460/1‑150 (MQ=255)
             tttGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGCCCAGCAGGCCAGCgga                                                                                                                                          <  1:1856547/150‑3 (MQ=255)
             tttGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGCCCAGCAGGCCAGCgga                                                                                                                                          <  1:941145/150‑3 (MQ=255)
             tttGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGCCCAGCAGGCCAGCgga                                                                                                                                          <  2:5215169/150‑3 (MQ=255)
              ttGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGAcc                                                                                                                                         >  2:6234436/1‑150 (MQ=255)
              ttGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGAcc                                                                                                                                         >  1:2999208/1‑150 (MQ=255)
                 aaTGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGc                                                                                                                                      >  1:1785872/1‑150 (MQ=255)
                   tGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTc                                                                                                                                    <  1:3406088/150‑1 (MQ=255)
                     ttGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGa                                                                                                                                  >  1:5983779/1‑150 (MQ=255)
                       gCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAAc                                                                                                                                <  2:6874527/150‑1 (MQ=255)
                        ccAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAAct                                                                                                                               >  2:1942132/1‑150 (MQ=255)
                         cAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAActg                                                                                                                              >  2:3678804/1‑150 (MQ=255)
                            cGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAActgctg                                                                                                                           <  2:5437441/150‑1 (MQ=255)
                               cAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGaa                                                                                                                        <  1:5691524/150‑1 (MQ=255)
                                aaTTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAg                                                                                                                       <  1:3472410/150‑1 (MQ=255)
                                aaTTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAg                                                                                                                       <  2:1013707/150‑1 (MQ=255)
                                     cAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCg                                                                                                                  >  1:1036007/1‑150 (MQ=255)
                                      aGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCgc                                                                                                                 <  2:91306/150‑1 (MQ=255)
                                        ggTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCgctg                                                                                                               >  1:6310451/1‑150 (MQ=255)
                                         gTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCgctgc                                                                                                              >  1:2039771/1‑150 (MQ=255)
                                             aTGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGt                                                                                                          >  2:3213366/1‑150 (MQ=255)
                                                tgGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTgg                                                                                                       >  1:4000927/1‑150 (MQ=255)
                                                      ccTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGgcgc                                                                                                 <  1:3608497/150‑1 (MQ=255)
                                                      ccTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGgcgc                                                                                                 <  2:5513614/150‑1 (MQ=255)
                                                         tGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTGCAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTga                                                                                              <  2:2850913/150‑1 (MQ=255)
                                                            cctcctCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgatac                                                                                           <  1:3744484/150‑1 (MQ=255)
                                                             ctcctcGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgatacc                                                                                          >  2:264553/1‑150 (MQ=255)
                                                              tcctcGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgataccg                                                                                         >  1:744962/1‑150 (MQ=255)
                                                              tcctcGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgataccg                                                                                         >  2:2024304/1‑150 (MQ=255)
                                                                 tcGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgataccgata                                                                                      >  2:4570570/1‑150 (MQ=255)
                                                                 tcGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgataccgata                                                                                      >  2:4570769/1‑150 (MQ=255)
                                                                 tcGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgataccgata                                                                                      >  2:5888169/1‑150 (MQ=255)
                                                                 tcGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgataccgata                                                                                      >  1:2393490/1‑150 (MQ=255)
                                                                   gCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTgataccgatacc                                                                                    >  2:4835827/1‑150 (MQ=255)
                                                                     tttCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCTGCTGCCCAGCAGGCCAg                                                                                                                                              <  1:2344061/90‑1 (MQ=255)
                                                                     tttCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGt                                                                                  >  1:5800867/1‑150 (MQ=255)
                                                                         aaCCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATc                                                                              <  1:6818149/150‑1 (MQ=255)
                                                                         aaCCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATc                                                                              <  1:1218142/150‑1 (MQ=255)
                                                                         aaCCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATc                                                                              <  1:913969/150‑1 (MQ=255)
                                                                            cTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATcctg                                                                           >  1:514841/1‑150 (MQ=255)
                                                                             tGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATcctgc                                                                          >  1:4456561/1‑150 (MQ=255)
                                                                               cgtCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATcctgcac                                                                        <  1:1560314/148‑1 (MQ=255)
                                                                                 tCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATcctgcacct                                                                      <  2:2299725/150‑1 (MQ=255)
                                                                                   cGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATcctgcacctgc                                                                    >  1:4606045/1‑150 (MQ=255)
                                                                                       cACCGTGCGCCTGGACGATCTGCTCGGGGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCCCCTGCAccc                                                                >  1:6765537/1‑150 (MQ=255)
                                                                                        aCCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCa                                                               <  1:2686591/150‑1 (MQ=255)
                                                                                        aCCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCa                                                               >  1:4183290/1‑150 (MQ=255)
                                                                                        aCCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCa                                                               <  2:4386872/150‑1 (MQ=255)
                                                                                        aCCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCa                                                               <  2:2287136/150‑1 (MQ=255)
                                                                                         ccGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAg                                                              <  1:3260447/150‑1 (MQ=255)
                                                                                           gTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGc                                                            <  2:1328050/150‑1 (MQ=255)
                                                                                             gcgcCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCa                                                          <  1:5816709/150‑1 (MQ=255)
                                                                                             gcgcCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCa                                                          <  2:235148/150‑1 (MQ=255)
                                                                                                    gACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATgccgcc                                                   <  2:6659009/150‑1 (MQ=255)
                                                                                                    gACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATgccgcc                                                   <  2:39807/150‑1 (MQ=255)
                                                                                                    gACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATgccgcc                                                   >  1:5223082/1‑150 (MQ=255)
                                                                                                        aTCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGc                                               <  1:1674411/150‑1 (MQ=255)
                                                                                                         tCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCt                                              <  2:314652/150‑1 (MQ=255)
                                                                                                         tCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCt                                              >  2:4100333/1‑150 (MQ=255)
                                                                                                          cTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTc                                             <  2:4449957/150‑1 (MQ=255)
                                                                                                            gCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGa                                           >  2:3512698/1‑150 (MQ=255)
                                                                                                             cTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGaa                                          <  2:2393490/150‑1 (MQ=255)
                                                                                                              tCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAac                                         >  1:2110837/1‑150 (MQ=255)
                                                                                                                ggAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAacac                                       >  1:2774239/1‑150 (MQ=255)
                                                                                                                 gagaTGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACAcc                                      <  2:809454/150‑1 (MQ=255)
                                                                                                                  agaTGTACAGCCCCAAGCCCGGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACAccc                                     <  2:6033819/150‑1 (MQ=255)
                                                                                                                   gaTGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCg                                    <  2:4778949/150‑1 (MQ=255)
                                                                                                                     tGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCa                                  <  2:1751544/150‑1 (MQ=255)
                                                                                                                      gTACATACCCAAGCACAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTCCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCAc                                 >  2:6383889/1‑150 (MQ=255)
                                                                                                                        aCAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCt                               >  2:299110/1‑150 (MQ=255)
                                                                                                                        aCAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCt                               >  2:5802285/1‑150 (MQ=255)
                                                                                                                            ccccAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCAc                           >  2:3948026/1‑150 (MQ=255)
                                                                                                                             cccAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCAGCAcc                          >  2:4967701/1‑150 (MQ=255)
                                                                                                                              ccAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCg                         <  1:5528162/150‑1 (MQ=255)
                                                                                                                              ccAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCg                         >  1:4381477/1‑150 (MQ=255)
                                                                                                                               cAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCgg                        >  2:2744796/1‑150 (MQ=255)
                                                                                                                                aaGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGa                       <  1:5584422/150‑1 (MQ=255)
                                                                                                                                aaGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGa                       <  1:4051167/150‑1 (MQ=255)
                                                                                                                                aaGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGa                       >  2:1612598/1‑150 (MQ=255)
                                                                                                                                  gCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGAtt                     <  2:5535580/150‑1 (MQ=255)
                                                                                                                                    ccAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTgc                   >  2:5323638/1‑150 (MQ=255)
                                                                                                                                    ccAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTgc                   >  1:642156/1‑150 (MQ=255)
                                                                                                                                    ccAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTgc                   >  2:6677614/1‑150 (MQ=255)
                                                                                                                                    ccAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTgc                   >  2:2462661/1‑150 (MQ=255)
                                                                                                                                      aGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTgcgc                 >  2:5038538/1‑150 (MQ=255)
                                                                                                                                        aCCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTc               <  1:3964705/150‑1 (MQ=255)
                                                                                                                                          cTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTCGc             >  2:3361899/1‑150 (MQ=255)
                                                                                                                                           tCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTAATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTCGcc            >  1:3789734/1‑150 (MQ=255)
                                                                                                                                                    ctgctgGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTCGCCGTAACgcat   >  1:4661706/1‑150 (MQ=255)
                                                                                                                                                     tgctgGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTCGCCGTAACgcatt  <  1:3050837/150‑1 (MQ=255)
                                                                                                                                                     tgctgGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTCGCCGTAACgcatt  <  2:4183290/150‑1 (MQ=255)
                                                                                                                                                     tgctgGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTCGCCGTAACgcatt  <  2:4225816/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGTCGTTTTGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCTTGCCCTCCTCGCTTTCAACCTGTATCCGGCCACCGTGCGCCTGGACGATCTGCTCGGAGATGTACAGCCCCAAGCCCAGACCTCCGCTGGCCTGCTGGGCAGCGACCCGCTCGAACTGCTGGAAGATCCGCTGCTGGTTGGCGGCGCTGATACCGATACCGTGATCCTGCACCTGCACCCAGGCCATGCCGCCCTGCTCGAACACCCGCACCTGCACCGGATTGCGCTCGCCGTAACGCATT  >  NC_002947/4291525‑4291823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: