| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 353,105 | T→G | 11.0% | intergenic (+69/+49) | hisF → / ← cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 353,105 | 0 | T | G | 11.0% | 384.4 / 6.7 | 175 | intergenic (+69/+49) | hisF/cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| Reads supporting (aligned to +/- strand): ref base T (84/64); new base G (10/15); total (96/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 197 total aligned reads displayed.
GCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTT > NC_002947/352956‑353254 | cAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCtgt < 2:4633642/150‑1 (MQ=255) aGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCtgtg < 1:48385/150‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCAGTgg > 1:1000135/1‑150 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCGGCG‑ATCTCTGTgg > 1:1000204/1‑150 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGa < 2:3189190/150‑1 (MQ=255) ttCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGa > 1:2906181/1‑147 (MQ=255) ttCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCg > 2:561262/1‑150 (MQ=255) cACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGc < 2:5571105/150‑1 (MQ=255) cACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGc < 1:976789/150‑1 (MQ=255) cTTTGGTGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGt < 2:1439301/150‑1 (MQ=255) tttGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTg > 2:6820838/1‑150 (MQ=255) ttGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGc > 2:3007345/1‑150 (MQ=255) gggCGAGTACACAGTGCCGGAGGCCAAGGCCGACAGGGCTTCGCGCGGGATCGGCGTTCGCTGATCCATTGACCGGGGCTGCGTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGCGAT‑CTCAGCAACCCTGTGGGAGCGGGCGTGcc < 1:5512271/149‑1 (MQ=21) cGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCcgc < 2:2932017/150‑1 (MQ=255) tACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCCCGCCCGCGCCCCCAGGGTTGGGGGG‑GTGTGGGGGGGAGCGGGCGGGGCCGCGAAg > 1:4736594/1‑150 (MQ=37) tACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAg < 2:1651681/150‑1 (MQ=255) acacTGCGCCGTCGGCCACGGCATACTGGGGTTGGGGGGGGATGGGGGTTGGGTGATCCATTTACCGGGGCTGCTTTGCAGCCATTCGGGGGCACGCCGGCTCCCACAGGTTTGATGAT‑TTCTCGGTGGGAGGGGGCACGCCcgctccca < 2:3320640/150‑6 (MQ=255) acacAGGGCCGGTGGCCAAGGCATACTGGGCTTCGCGCGGGATCGTCGTTCGCTGAGCCATTGACCGGGGCTGGTTTGCAGCCCTTCGGGGGCACGCCGGCTCCCAGAGGTTTGCTGAT‑ATCTCGGGGGGAGCGGGCACGCCcgctccca < 2:6790414/150‑6 (MQ=255) acaGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGc > 1:3361249/1‑150 (MQ=255) aGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCcg > 2:1303627/1‑150 (MQ=255) tGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCGGCG‑ATCTCTGGGGGAGCGGGCGGGCCCGCGAAGGGCcgcg > 2:2095478/1‑150 (MQ=255) ggAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCCGCCCTTCGCGGGCACGCCCGCTCCCCCCGGTTTGCTGAG‑ATCTCGGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGc < 2:1774892/150‑1 (MQ=255) gAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCCCTCCCACACGGTTGCGGAG‑ATCACTGTGGGAGCGGGCGTGCCCCCCAAGGGCCCCGAAGCg > 1:3655548/1‑150 (MQ=38) aGGCCAAGGCCTACCTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCgg < 2:5896658/150‑1 (MQ=255) gCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGcc > 1:456288/1‑150 (MQ=255) cAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGGCCGCCCCCGCCCACCGGGTTTGGGAG‑ATGTCTGTGGGGGCGGGGGGGGCCGCGCAGGGCCGCGGAGCGGcccc > 1:53493/1‑150 (MQ=255) tACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCt < 1:6757438/150‑1 (MQ=255) tACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCt > 1:1663445/1‑150 (MQ=255) cATGGGTTCGCGCGGGATCGCCGTTCGCTGCTCCATTGACCGGGGCTGCTGTGCCGCCCTTCGCGGGCACGCCCGCACCCCCCGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTc < 2:5748181/150‑1 (MQ=38) cATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTc > 2:2899171/1‑150 (MQ=255) cATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGGTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCGTc > 2:2899235/1‑150 (MQ=255) ttCGCGCGGGATCGTCGTTCGCTGATCCATAGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCACACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGt > 2:5479588/1‑150 (MQ=255) tCGCGCGGGATCGTCGTTCGCTGATCCATTGCCCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACCGGTTTGCTGAG‑ATCTCGGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTg < 1:6110134/150‑1 (MQ=255) gcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGGTGAG‑ATCTCTATGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGt > 1:515263/1‑150 (MQ=255) gcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACCCCCCCTCCCACAGGTTAGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCCAAGGGCCGCGAAGCGGCCCCAAATGCTTCAACCGTGGt > 2:262923/1‑150 (MQ=39) cgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCt < 2:456288/150‑1 (MQ=255) gggATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCtt > 2:2800011/1‑150 (MQ=255) gtTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAACGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGagcag > 2:4050931/1‑150 (MQ=255) tGATCCATTGACCGGGGCTGCTGTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTg < 2:2539398/150‑1 (MQ=255) aTCCATTGACCGGGGCTGCTTGGCCGCCCTGCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGt < 2:53493/150‑1 (MQ=255) cATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTaaa < 2:3116924/150‑1 (MQ=255) cATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTaaa < 2:5086537/150‑1 (MQ=255) aTTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGCG‑ATCTCGGTGGGCGCGGGCGTGCCCCCGAAGGGCCGCGAAGCGGCCCCAAATGCTTAAACCGTGGTTCTTTCCGAGCAGCCCGTGGTAAAg > 1:3264992/1‑150 (MQ=38) aTTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAg > 2:1122641/1‑150 (MQ=255) aTTGACCGGGGCTGCTTTGCAGCCCTCCCCGGGCACGCCCGCTCCCCCAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGCAGCGGCCCCAATTGCTTCAACCCTGGTTCTTGCCGAGCAGCGCGTGGTAAAg > 2:4834688/1‑150 (MQ=39) gACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACCGGGGTGCGGCG‑ATCGCGGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCCATTGCGTCAACCGTGGGTCTTGCCGAGCCGCGCGTGGTAAAGCTc > 1:1127446/1‑150 (MQ=25) attggggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGt > 1:6011315/4‑76 (MQ=17) attggggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGt < 2:6011315/73‑1 (MQ=17) aCCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCGGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg < 2:212317/150‑1 (MQ=255) ccGGGGCTGCTGTGCAGCCCTTCGCGGGCACGCCCGCTCCCTCAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCgg < 2:2673318/150‑1 (MQ=255) gggCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACCGGGTTGCTGGG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGCAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCGTGCCGAGCAGCGCGGGGTAAAGCTCGGTAt > 2:3019457/1‑150 (MQ=38) ggcggcTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGTTTTGCTGAG‑ATCCCTGTGGCAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATc < 1:1827511/150‑1 (MQ=255) ctTTGCCCCCCTGCGCGGGCACGCCCGCTCCCACGGGTTGGCTCCG‑ATCTCGGGGGGCCCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGa < 1:318308/150‑1 (MQ=38) ctTTGCAGCCCTTCGCGGGCACGCCGGCTCCCAATGGTTTGCTGAG‑ATCTCTGGGGGAGGGGGCTTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGa < 1:4383261/150‑1 (MQ=39) ctTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTTAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGa < 1:414711/150‑1 (MQ=255) ctTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGa < 1:6842061/150‑1 (MQ=255) ttGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGt < 1:3987326/150‑1 (MQ=255) tggccgCCCTTCGCGGGCACGCCCCCTCCCCCAGGTTTGCTGAG‑ATCTCTGTGGGAGGGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGt < 1:3526616/145‑1 (MQ=255) aGCCCTTCGCGGGCACGCCCGCTCCCACCGGGTTGCGGAG‑ATCTCGGGGGGAGCGGGCGGGCCCCCGAAGGGCCGCGAAGCGGCCCCCATTGCGTCAACCGTGGGTCGTGCCGAGCCGCGCGGGGTAAAGCGCGGTATCCCCCAGTATcc > 2:78468/1‑150 (MQ=255) ttCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCccacc > 2:4523687/1‑150 (MQ=255) tCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCccacca < 2:474616/150‑1 (MQ=255) gCACGCCCGCTCCCACAGGTTTGCTGAG‑AACTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGt < 1:5965111/150‑1 (MQ=255) aCGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCg > 2:1818035/1‑150 (MQ=255) aCGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCg > 1:3799057/1‑150 (MQ=255) aCGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCg > 1:6829534/1‑150 (MQ=255) gCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGtt > 1:5771795/1‑150 (MQ=255) gCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGtt > 2:2833583/1‑150 (MQ=255) ccGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTAt > 1:4097972/1‑150 (MQ=255) cGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATc > 2:2863686/1‑150 (MQ=255) gCTCCCACCGGTTGGCTGAG‑AACTCTGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCGTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATcc < 1:404426/150‑1 (MQ=39) tCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGTGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTg > 1:2512329/1‑150 (MQ=255) tCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGGCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTg > 1:6488320/1‑150 (MQ=255) tCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTg > 1:1933247/1‑150 (MQ=255) cccACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTgc < 2:6138206/150‑1 (MQ=255) ccACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTgca < 1:2765677/150‑1 (MQ=255) ccACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTgca > 2:6576967/1‑150 (MQ=255) ccACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTgca > 2:1131493/1‑150 (MQ=255) ccACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTgca < 2:4814911/150‑1 (MQ=255) acaGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCccac > 2:3770360/1‑128 (MQ=255) acaGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTgcagc > 1:3582678/1‑150 (MQ=255) acaGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTgcagc > 2:427110/1‑150 (MQ=255) acaGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTgcagc > 1:903786/1‑150 (MQ=255) ggTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCAcc > 2:3215305/1‑150 (MQ=255) gTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCa > 1:3327281/1‑150 (MQ=255) tGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCt > 2:5949149/1‑150 (MQ=255) gCTGAG‑ATCGCTGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCtt < 1:155127/150‑1 (MQ=255) cTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCttg < 2:1609166/150‑1 (MQ=255) cTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCCAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCCAGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCAGTCGTTAAACTGCAGCACCAGcaag > 1:6445504/1‑147 (MQ=38) cTGAG‑ATCTCGGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCttg < 1:2362804/150‑1 (MQ=255) tGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCttgt > 1:2715439/1‑150 (MQ=255) tGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCttgt > 2:4047944/1‑150 (MQ=255) gag‑aTCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCttgtt > 2:2235805/1‑150 (MQ=255) gag‑aTCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCttgtt > 1:201550/1‑150 (MQ=255) ag‑aTCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCttgttg > 1:3396340/1‑150 (MQ=255) tctGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGt > 2:1804837/1‑150 (MQ=255) tctGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGt > 1:6319845/1‑150 (MQ=255) tctGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCGTGTTGCCGGt > 1:4637017/1‑150 (MQ=255) ctGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGtt > 2:4966695/1‑150 (MQ=255) tgtgGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGttt < 1:2127188/150‑1 (MQ=255) tgtgGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGttt > 1:1838902/1‑150 (MQ=255) | GCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAG‑ATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTT > NC_002947/352956‑353254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |