| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,343,487 | A→T | 10.3% | intergenic (+114/+28) | PP_3812 → / ← PP_5632 | lipase/allo‑isoleucine metabolism protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,343,487 | 0 | A | T | 10.3% | 684.4 / 55.6 | 241 | intergenic (+114/+28) | PP_3812/PP_5632 | lipase/allo‑isoleucine metabolism protein |
| Reads supporting (aligned to +/- strand): ref base A (120/94); new base T (8/17); total (130/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.26e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.54e-01 | |||||||||||
Only 100 of 244 total aligned reads displayed.
CGGGCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAACT > NC_002947/4343342‑4343636 | cGGGCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAAccc < 1:4177823/150‑1 (MQ=255) gggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTTTACCcg < 1:3534983/150‑1 (MQ=255) gggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCcg > 2:3451443/1‑150 (MQ=255) gggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCGTTCG‑CGGGTTAACCcg > 1:6506872/1‑150 (MQ=255) ggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCcgc < 2:3931923/150‑1 (MQ=255) ggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCcgc < 1:4283979/150‑1 (MQ=255) ggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCcgc < 1:3872651/150‑1 (MQ=255) ggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCcgc < 2:4104180/150‑1 (MQ=255) ggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑G‑CCGGCCCTTTCG‑CGGGTTTACCcgc < 1:2634820/150‑1 (MQ=255) aCGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTTTACCCGCGaaa < 2:3223567/150‑1 (MQ=255) aCGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGaaa < 1:4688101/150‑1 (MQ=255) aCGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGaaa < 1:5868104/150‑1 (MQ=255) aCGAACCTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGaaa < 1:5412503/150‑1 (MQ=255) cGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTTTACCCGCGAAAg < 2:6770148/150‑1 (MQ=255) cGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTTTACCCGCGAAAg < 2:5708159/150‑1 (MQ=255) cGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAg < 1:1848691/150‑1 (MQ=255) gAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAgg < 2:4998698/150‑1 (MQ=255) aCTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGATTTGCCGGCCCTTTCG‑CGGGTTTACCCGCGaaa < 1:5665258/150‑1 (MQ=38) cTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGcc < 2:1037803/150‑1 (MQ=255) ttAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCC‑CCGGTAAACCCGCGAAAGGGCCg > 2:4768946/1‑150 (MQ=255) tGCATCTGCAGTGTGGCGAGGAGAAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTGGCGGACACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAACCCCGCGAAAGGGCCGGCAAAt < 2:4004211/150‑1 (MQ=255) aTCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGaaa < 1:4840223/135‑1 (MQ=255) aTCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGaaa > 2:4840223/1‑135 (MQ=255) cTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCCCATCCTGc > 2:785667/1‑150 (MQ=255) tGCAGTGTGGCGATGAGCAACAGACCCGCCTGGGCGGTCCTTTTGCTTCTTTTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCTGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCt < 2:6450338/150‑1 (MQ=255) aGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATACTGCGCAGGGCt > 1:3343207/1‑150 (MQ=255) gCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTGCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGGCCGTTCG‑CGGGGCCACCCGCGAAAGGGCCGGCCAATCCAGCTCAGGGCTcc > 1:963297/1‑149 (MQ=255) gCGATGAGAAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGGGGTGCGGCTGG‑‑‑T‑CCGGCCCTTTCG‑CGGTTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCa < 2:1193632/150‑1 (MQ=255) aGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCt < 2:4362804/150‑1 (MQ=255) gCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCGTACG‑CGCGTAAAACCGCGAAAGGGCCGGCAAATCCAGCGAAGGGCTCAAAcacaa > 1:6142512/1‑146 (MQ=255) gCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCCTTAG‑CCGGGTAACCCGCCAAAGGGCCGGCCAAAACGGCGCCGGGGGCAAAcccgg > 1:725914/1‑148 (MQ=255) aaaaGACCCGCCCAGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCGGTGG‑CGGGGGAACCCCCGGCAGGGGCGGCAAAAACAGCGCACGGGGCAAACCCCTcc > 1:5150962/4‑150 (MQ=255) aaaaGACCCGCCCAGGCGGGTCTATTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGGAAACCCGCGAAAGGGCCGGCACATCCTGCTCAGGGCTCAAAcccggcc > 2:261687/4‑146 (MQ=255) aaTAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTACACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTGcc > 2:6242014/1‑150 (MQ=255) aaTAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAATCcg > 1:4953455/1‑109 (MQ=255) aTAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCca < 2:4422334/150‑1 (MQ=255) tAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCATCcac > 1:1059605/1‑150 (MQ=255) aCCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑G‑CCGGCCCATTCG‑CGGGTAAAACCGCGCAAGGGCCGGCAAATCCTGCTCAGGGCTCAATCCCGTCCACAAt > 2:5252141/1‑150 (MQ=255) ccGCGTGGGGGGGTCTTTTGCTTTTTTTTGCGTAAACAGCCCGCTGGCTTAAATGAATGTGCCTGGGGTGGGGCTGG‑‑‑T‑CGGGCCTTTTCG‑GGGTTAAACCCGCTAATGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGa < 1:2556839/150‑1 (MQ=255) ccGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAAAGa > 2:5073965/1‑150 (MQ=255) ccGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCCTTAGCCGGGGAAACCC‑CCCAACGGCCGGCCAAAACAGCGCCGGGCTCAAAAACATCCACaaagt > 1:809004/1‑147 (MQ=255) ccGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCATTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGa > 2:1592473/1‑150 (MQ=255) gCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCTGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCa < 1:6694950/150‑1 (MQ=255) gCGGGTATTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCTGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCGCa < 2:6764108/150‑1 (MQ=255) gggTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCATTCG‑CGGGTAAACCCGCCAAAGGGCCGGCAAATACTGCGCAGGGCTCAAAACCATCCACAAAGATCACCACAGc > 2:608097/1‑150 (MQ=255) gTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCGTTGG‑CGGGGAAACCCCCGAAAGGGCCCGCCAAAAAAGCTCAGGGCGCAAAACCCTCCACAAAGATAACCAAAGCCt > 1:3096545/1‑150 (MQ=255) cTTTTGCTTCTTTTTGCGGAACCCGCCCGCCGGCTTCAATGAATCTGCCAGCGGTGCGGCCGG‑‑‑T‑CGGGCCCTTGCG‑GGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTc < 1:5488085/150‑1 (MQ=255) ttttGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCCAATCCAGCTCAGGGCTCAAACCCTTCCACACTGATCACCGCAGCCTTCg > 2:726288/1‑150 (MQ=255) gCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCCAATCCTGCGCAGGGCTCAAACCCGTCCACAATGATAACCGCAGCCATCGCCAc > 2:4619211/1‑150 (MQ=255) cTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCCAATACTGCTCAGGGCTAAAACCCTTCCACAAAGATAACCACACCCGTAGCCAcc > 1:6863811/1‑150 (MQ=255) ttCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCATCCACAATGATCACCTCAGCCTTCGCCAccc > 2:1536738/1‑150 (MQ=255) ttCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTAG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCAccc > 2:4593801/1‑150 (MQ=255) aTTTGCGGAAACCGCCCGCCGGGTTCAATGAATCTGCCAGCGGTGCGGCTGG‑‑‑G‑CCGGCCCTTGCG‑CGGTTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTg < 1:2394906/150‑1 (MQ=255) aTTTGCGGAAACAGCCCGCAGGCTTCAATGAATCGGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTg < 1:1672627/150‑1 (MQ=255) cgtaaaCAGCCCGCAGGATTCAATGAATCTGCCTGCGGTGCGGCTGG‑‑‑T‑CCGGCCCTTTCG‑CGGTTAAACCCGCGAATGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGAt < 1:2114990/147‑1 (MQ=255) ggAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATg < 2:2789427/150‑1 (MQ=255) ggAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAAACCGCGAAAGGGCCGGCAAAAGCTGCTCAGGGCTCAAAACCATCCACAAAGAAAACCTCAGCCTTCGCCCCCCCGTGGCGATg > 2:1426572/1‑150 (MQ=255) aCAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTg > 2:2715119/1‑150 (MQ=255) gCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATACTGCTCAGGGCGCAAACCCTTCCACAAAGATCACCACAGCCTTCGCCACCCCGTGGCGATGGCTGCAt > 1:4562647/1‑150 (MQ=255) cccGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCGTTAG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAAACCGTCCCCAAAGATCACCACAGCCGTCGCCCCCCCATGGCCGTGGCTGCATg > 1:4456853/1‑150 (MQ=255) cGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCATTCG‑CCGGTAAAACCCCGAAAGGGCCGGCAAAAACAGCTCAGGGGTCAAAACCTTCCACAAATATGACCGCAGCCATCGCCACCCCATGGCGATGGCTGCATGcc > 1:2078552/1‑150 (MQ=255) gattCATTTAATCTGCCTGGGGTGCGGCAGG‑‑‑G‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCACAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTg < 1:625114/148‑1 (MQ=255) ttCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCATTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCATCCACAATGATAACCTCAGCCATAGCCACCCCATGGCGATGGCTGCATGCCGCTTGGt > 2:6352816/1‑150 (MQ=255) ttCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCATTCG‑CGGGGAAACCCGCGCAAGGGCCGGCCAATCCGGCGCACGGCGCAAACCCGGCCCCCCTGATCCCCACAGCCGTCGCCCCCCCGGGGCGGGGGCTGCAGGccgcggggg > 2:5898366/1‑143 (MQ=255) aaTGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACa < 1:6377586/150‑1 (MQ=255) aTGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTATCG‑CGGGGAAAACCCCGCAAGGGCCGGCAAAACCTTCACAGGGCGCAAAACCTTACACAAAGATAACCCCACCCATACCCACCCCTAGGCGAAGGCTGCATGCCTCTTGGTAccc > 2:3627298/1‑148 (MQ=255) aaTCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCATTAG‑CCGGTAAAACCCCCAAAGGGCCCGCAAAAAAAGCTCAGGGCTCAAAACCATACACAAAGATAAACACAGCCTTAGCCACCCCGTTGCCATTGCTGCAAGCCGCGTGGTACaaccc > 2:2461178/1‑146 (MQ=255) aTCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGcgcg < 2:1804524/150‑1 (MQ=255) tGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAg < 2:3186603/150‑1 (MQ=255) tGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAg < 2:4236954/150‑1 (MQ=255) cccggggTGGGGCAGG‑‑‑G‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCg < 1:5340630/145‑1 (MQ=255) ccAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCg < 2:5351997/150‑1 (MQ=255) ccAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCg < 1:1485537/150‑1 (MQ=255) cgCGGTGCGGCAGG‑‑‑C‑CCGGCCCTTTCG‑CGTGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGt < 1:574775/149‑1 (MQ=255) ggCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCATCCACAAAGATCACCACAGACATCGCCACCCCATGGCGATGGCTGCATGCCTCTTGGTAAAGCGCGGAGCGGTAACAGGCg > 2:2100518/1‑150 (MQ=255) gCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCCCCAAAGGGCCCGCCAAAACAGCTCAGGGCTCAAAACCATACACAAAGATAAACACAGCCATAGCCACCCCATGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACACGCGa > 2:5278969/1‑150 (MQ=255) g‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGc > 2:2838251/1‑150 (MQ=255) ccGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCt > 2:1092142/1‑150 (MQ=255) cTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGt < 1:3894015/150‑1 (MQ=255) cTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGt > 2:6741927/1‑150 (MQ=255) tttCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa < 2:6506872/150‑1 (MQ=255) tttCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa > 1:6230749/1‑150 (MQ=255) ttCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTc > 2:6180068/1‑56 (MQ=255) ttCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTAc > 1:4704709/1‑150 (MQ=255) ttCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTAc < 2:1674836/150‑1 (MQ=255) g‑cgGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGaa < 1:4603488/150‑1 (MQ=255) g‑cgGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGaa > 2:4479832/1‑150 (MQ=255) cgGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAAt > 1:6082966/1‑150 (MQ=255) cgGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAAt < 2:1743301/150‑1 (MQ=255) gggTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATc > 2:810445/1‑150 (MQ=255) gggTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATc < 2:5167079/150‑1 (MQ=255) ggTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCg > 2:5508769/1‑150 (MQ=255) ggTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCg > 2:5508365/1‑150 (MQ=255) gTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGa > 2:3817091/1‑150 (MQ=255) gTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGa > 2:3448105/1‑150 (MQ=255) tAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTCCCAGGCGACGGCCTGCGCGTACGACTCGaa > 2:1986453/1‑150 (MQ=255) tAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGaa < 2:6648562/150‑1 (MQ=255) tAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGaa > 1:520280/1‑150 (MQ=255) aaaCCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAAc > 1:119242/1‑150 (MQ=255) aaCCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAACt < 1:2784669/150‑1 (MQ=255) | CGGGCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGG‑‑‑T‑CCGGCCCTTTCG‑CGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAACT > NC_002947/4343342‑4343636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |