| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,501,664 | C→T | 5.1% | intergenic (+21/+31) | PP_3987 → / ← PP_5651 | site‑specific recombinase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,501,664 | 0 | C | T | 5.1% | 950.3 / 23.8 | 294 | intergenic (+21/+31) | PP_3987/PP_5651 | site‑specific recombinase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (121/158); new base T (9/6); total (130/164) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 295 total aligned reads displayed.
ATACGCCCCAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCAGAGCTAGT > NC_002947/4501515‑4501812 | cAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGAGCGTACCCCGCt < 1:1858948/150‑1 (MQ=255) aaGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTCATTCGAAGCGGGGTACGCTCCCCGCtt > 2:4102308/1‑150 (MQ=255) aaGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCtt < 2:841534/150‑1 (MQ=255) aaGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCtt < 2:3593670/150‑1 (MQ=255) aaGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCtt < 2:5126942/150‑1 (MQ=255) aGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCttt < 1:4179853/150‑1 (MQ=255) ggcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCAAAGCGGGGAGCGTACCCCGCttcg < 2:5747649/150‑3 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTcc < 2:2347071/141‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 2:5811292/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 1:4708231/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 2:5504394/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 1:4579997/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 2:1330993/150‑1 (MQ=255) gcggcAAGCGAAATCGGAGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCAAAGCGGGGAGCGTACCCCGCTTCGa < 1:4308152/150‑1 (MQ=255) cggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATCGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAg < 1:5572223/150‑1 (MQ=255) gcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGTTAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGca < 2:1760310/150‑1 (MQ=255) gcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGca > 1:4233866/1‑150 (MQ=255) cAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTCATTCGAAGCGGGGTACGCTCCCCGCTTTGAGcac > 2:4312854/1‑150 (MQ=255) aaGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGcaca > 1:4664916/1‑150 (MQ=255) gCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTACTTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAAt > 1:3854090/1‑150 (MQ=255) tttGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCt < 2:694903/150‑1 (MQ=255) tGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTAt < 1:526015/150‑1 (MQ=255) ggTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTg < 1:5277693/150‑1 (MQ=255) gTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGa > 2:3283291/1‑150 (MQ=255) gTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGCACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGa < 2:1937231/150‑1 (MQ=255) tCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAg < 1:1988683/150‑1 (MQ=255) cACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGc < 2:5422072/150‑1 (MQ=255) aCGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCt < 2:4672446/150‑1 (MQ=255) aCGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCt > 2:1049415/1‑150 (MQ=255) aaGCCGCATATTGGCTCACACTGACAAGCTCATAACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATAc < 1:6862949/150‑1 (MQ=255) gccgccTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGc < 1:3751622/150‑1 (MQ=255) gccgccTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGc > 1:1733286/1‑150 (MQ=255) gccTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCAtt < 2:3008374/150‑1 (MQ=255) gccTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCAtt < 2:3923234/150‑1 (MQ=255) ttGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATc > 1:233818/1‑150 (MQ=255) gTCACACTGACAAGCGCATCACACAATCGGTATATAGACGAGTAGGTGAAATCGTACTGCCAACACGATCGGTAATTCGAAGCGGGGTACGCTCCCCGCTTGGAGCACAATTCACAACTGATCGATGGAGCTATACGCATTGTCTCAATc > 2:2102611/1‑150 (MQ=255) gTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATc < 1:5234830/150‑1 (MQ=255) tCACACTGACAAGCGAATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCt < 2:4499762/150‑1 (MQ=255) cacaCTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCtt < 1:6694551/150‑1 (MQ=255) cacaCTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCtt < 2:4232626/150‑1 (MQ=255) acacTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATc > 1:1427263/1‑120 (MQ=255) acacTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTa < 2:2467005/150‑1 (MQ=255) tGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCtt > 1:1177859/1‑150 (MQ=255) tGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCtt > 1:2911475/1‑150 (MQ=255) aaGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAg < 1:5171396/94‑1 (MQ=255) aaGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTtgctg < 2:1258387/150‑1 (MQ=255) aGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAAATCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTtgctgc > 2:5224791/1‑150 (MQ=255) gcATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGctct < 1:2463394/150‑1 (MQ=255) cATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTg < 1:4034342/150‑1 (MQ=255) aTCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGc > 2:1394861/1‑150 (MQ=255) tCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGcc > 2:6448141/1‑150 (MQ=255) tCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGcc < 1:85207/150‑1 (MQ=255) tCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGcc < 2:1601896/150‑1 (MQ=255) cacacaAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCa < 1:2367640/150‑1 (MQ=255) cacaAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATGGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCAcc > 1:4870498/1‑150 (MQ=255) acaAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCAccc < 1:266523/150‑1 (MQ=255) aaaCGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCaa > 1:625053/1‑150 (MQ=255) aaaCGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCaa < 1:5064512/150‑1 (MQ=255) aaCGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAat < 2:6327256/150‑1 (MQ=255) aaCGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAat < 2:6627504/150‑1 (MQ=255) tatataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAAtcatca > 1:3701811/1‑150 (MQ=255) tataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATa < 1:4457205/150‑1 (MQ=255) tataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATa < 1:6808866/150‑1 (MQ=255) tataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATa > 1:3936572/1‑150 (MQ=255) tataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATa < 1:3283291/150‑1 (MQ=255) ataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAg > 2:112629/1‑150 (MQ=255) taGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAgg > 2:3217676/1‑150 (MQ=255) aGACGAGTAGGTGAAATCGTACAGCCAACACGAGAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGt > 2:590908/1‑150 (MQ=255) cGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTc < 1:3383664/150‑1 (MQ=255) aGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCga < 2:345723/150‑1 (MQ=255) aGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCga < 2:4138897/150‑1 (MQ=255) aGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCga < 2:4076379/150‑1 (MQ=255) ggTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCgagaga > 1:5408850/1‑150 (MQ=255) gTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGaa < 2:3985102/150‑1 (MQ=255) gTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGaa < 2:261486/150‑1 (MQ=255) tCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTc < 1:5803257/150‑1 (MQ=255) tACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCa > 1:3681528/1‑150 (MQ=255) aCAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCAc > 1:4779490/1‑150 (MQ=255) ccAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCt > 1:4008155/1‑150 (MQ=255) aaCACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGa < 1:1556402/150‑1 (MQ=255) aaCACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGa < 1:3091783/150‑1 (MQ=255) aaCACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGa < 2:6042675/150‑1 (MQ=255) acacGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAg < 1:257686/150‑1 (MQ=255) acGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTa < 2:3772312/150‑1 (MQ=255) acGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTa > 1:6149820/1‑150 (MQ=255) gTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCttt > 1:2650427/1‑150 (MQ=255) gTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCttt > 2:4995201/1‑150 (MQ=255) tAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTg < 2:3699176/150‑1 (MQ=255) tAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTg < 2:742038/150‑1 (MQ=255) tAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTg < 1:5513680/150‑1 (MQ=255) tcaaaGCGGGGAGCGTACCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGAcc > 2:553701/4‑150 (MQ=255) tcaaaGCGGGGAGCGTACCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGAcc > 1:2292875/4‑150 (MQ=255) tcaaaGCGGGGAGCGTACCCCGCTTCGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGAcc > 2:6281170/4‑150 (MQ=255) gAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCtt > 1:6437360/1‑150 (MQ=255) cGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCa < 1:3007040/150‑1 (MQ=255) gggTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCaga < 1:4102308/150‑1 (MQ=255) ggTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCagag < 2:4808890/150‑1 (MQ=255) ggTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCagag > 1:3101627/1‑150 (MQ=255) aCGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCAGAGCTa < 2:2255040/150‑1 (MQ=255) gCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCAGAGCTAGt < 1:5906953/150‑1 (MQ=255) | ATACGCCCCAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCAGAGCTAGT > NC_002947/4501515‑4501812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |