| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,538,604 | A→T | 10.4% | intergenic (+53/‑121) | PP_4020 → / → cpo | oxidoreductase/non‑heme chloroperoxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,538,604 | 0 | A | T | 10.4% | 529.9 / 11.6 | 194 | intergenic (+53/‑121) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase |
| Reads supporting (aligned to +/- strand): ref base A (86/80); new base T (2/22); total (91/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.94e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 209 total aligned reads displayed.
AGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGT > NC_002947/4538455‑4538753 | aTCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGGGCGGGGCTCTTAGCGGGGGGAAGGGACCGcacacagg > 2:1789935/1‑146 (MQ=255) cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 1:4608076/150‑1 (MQ=255) cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 1:1897065/150‑1 (MQ=255) cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 2:4263022/150‑1 (MQ=255) aaCGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGc < 1:1516089/150‑1 (MQ=255) aaCGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGc < 2:1028526/150‑1 (MQ=255) cGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCgg < 1:1707565/150‑1 (MQ=255) cGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCgg < 2:3702561/150‑1 (MQ=255) ggCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCggg < 2:6819224/150‑1 (MQ=255) ggCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCGCTTCGCGGGGGGAAGGGGCCTCACAGGGTAGGTGCggg > 2:4149695/1‑150 (MQ=255) cGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGGGCGGGGCGCATCGCGGGTGAAAGGGGCCCCCCCGGGGAGGAGCGGGGTc > 2:1387242/1‑150 (MQ=255) ttCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCTTGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCGGTGCGGGGCGCGTCGCGGGGGGGAGGGGCCGAACACTGTAGGGGGGGGGTcgac > 1:5485136/1‑147 (MQ=255) ttCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCGGTGGGGGCCTCGTAGCGGGGGGACGGGACCGCACACAGTAGGAGCGGGGTCAcc > 1:5691794/1‑150 (MQ=255) tCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCt < 2:1309330/150‑1 (MQ=255) tCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCt < 1:6126097/150‑1 (MQ=255) cccGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgc > 1:4559985‑M2/1‑148 (MQ=255) ccGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGTGCGGGGCGCATCGCGGGGGGAAGGGACCACACAGTGTAGGAGCGGGTTAACCAgcg < 2:260801‑M2/150‑4 (MQ=255) cggcggCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCGGTGGGGGCCACGTCGCGGGGGTCAGGGGCCGCACAGAGTAGGAGCGGGTTAACCAgcga < 1:526183‑M2/150‑5 (MQ=255) cggcggCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcga > 2:716869‑M2/1‑146 (MQ=255) ggcggcGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaa > 1:1617338‑M2/1‑145 (MQ=255) ggcggcGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaa > 1:5640474‑M2/1‑145 (MQ=255) gcggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCggg > 2:4667420/1‑137 (MQ=255) gcggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaag > 1:2953564‑M2/1‑144 (MQ=255) ggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCACAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagag > 1:4519752‑M2/1‑142 (MQ=255) ggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagag > 2:4210096‑M2/1‑142 (MQ=255) catggtcgtgtctcctgggtgcaggaagcgaagggagctattgagaataggagggattttggcgggtatcaggaagttGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAagag > 1:3334493‑M1/79‑150 (MQ=255) gcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagagg > 2:6693961‑M2/1‑141 (MQ=255) atggtcgtgtctcctgggtgcaggaagcgaagggagctattgagaataggagggattttggcgggtatcaggaagttGTGTTGCCTGTGTGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAgg > 2:5331137‑M1/78‑150 (MQ=255) ctgctgGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGGGCGGGGCGCGTCGCGGGTGGAGGGGGCCCCACAGGGGAGGGGCGGGGTGACCGGCGAAGAGGccccc > 2:2289414/1‑148 (MQ=255) gtctcctgggtgcaggaagcgaagggagctattgagaataggagggattttggcgggtatcaggaagttGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCcacaca > 2:4351460‑M1/70‑150 (MQ=255) tggctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAg < 2:5956840/150‑1 (MQ=255) tggccgCCCCTTTGGAAGCTGCGGCAAACGCCGGGCACCGCACGCGCGACCGGGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAg < 2:6537953/150‑1 (MQ=255) gctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGc < 1:1672838/150‑1 (MQ=255) tgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCaa < 1:2069970/150‑1 (MQ=255) tgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGGGCGGGCCTCTTCGCGGGGGGAAGGGCCCGCCCCGTGGAGGTGCGGGGTGACCAGCGACGAGGCCCACACAGGCac > 2:3182334/1‑149 (MQ=255) cgcCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCTGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAACGGGACCTCACTGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAaca < 2:4118444/150‑1 (MQ=255) gcCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAacac < 2:4652591/150‑1 (MQ=255) cTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGTGCGGGCCGCGTCGCGGGGGGAACGGACCGCACAGGGTGGGGGCGGGGGGACCAGCGAAGACGCCCCCACACCCcacacac > 2:3758518/1‑149 (MQ=255) tttGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAAc < 2:443494/150‑1 (MQ=255) tttGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGTGGGGGGCGCGTCGCGGGTGGAAGGGCCCCCACACTGTGGGGGCGGGGTGGACGGCGAAGGGGCCCCCACCCGCCACCCAAc > 2:1842787/1‑150 (MQ=255) ggAACCTGCGGCCCCGGCCGGGCACCGCACGCGCGCCCGGGTCTGACGGGCATCAGTGTTGCCTGTGCTTGCCTGTTCGCGGGTGAACGGTAAACAACAGTGTTTGGGCGGGTTCACCGGCGAAGAGGCCCACACAGGCAACACAACTTc < 2:3408863/150‑1 (MQ=255) gCTGCGGCAACGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTGGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGa < 2:6614847/150‑1 (MQ=255) gCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGGGCGGGCCACGTCGCGGGTGGGAGGGGCCGCCCACTGTATGAGCCGGGTGAACAGCGAACAGGCCCACCCACGCCACACAACATACAGATAcccc > 2:4761226/1‑149 (MQ=255) cggCCTGGTACCGCTTGCGCGACCGTGTCTGAAGGGCATCTGTGTTGCGTGTGGGGGCCTCTTCGGGGGTGAAAGGGACCTCACTGTTTAGGAGGGGGTTCACCTGCGATGAGGCCCACACTGGCAACACAACTTCCTGATACCCGCCaa < 2:2370958/149‑1 (MQ=255) cTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGa < 1:4905742/89‑1 (MQ=255) cTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGa > 2:4905742/1‑89 (MQ=255) ggTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGTGCGGGCCGCGTCGCGGGTGAAAGGGACCGCACAGTGTAGGAGCGGGTTCACCGGCGAAGAGGCCCACACAGGCAACACCACTTCCTGGTACCCGCCAAAATacc > 2:3976690/1‑150 (MQ=255) tcccGCAGGCGCGCCCGGGTCTGACGGGCATCCGTGTGGCCTGTGCGGGCCTCTGCGGGGTTGAAAGGTACCTCACAGTGTTGGCGCGGTTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctc < 2:2486006/148‑1 (MQ=255) ccGCATGCGCGCCCGTGTCTGAAGGGCATCAGTGGTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctcct < 2:1200469/150‑1 (MQ=255) tGCGCGACGTTGTCTTATGGGATTCTGTGTTGCGTGTGGGGGCCTGTTCGGGGGTGAATGGGACCTCACTGTTTTGGTGGGGTTTCACCTGCGATGAGGCCAAAACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATtct < 1:4441860/150‑1 (MQ=255) tGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCAGTGCGGGCCTCTTCGCGGGTGAAAGGGACCGCACAGTGTAGGAGCGGGGTCACCAGCGAAGAGGCCCACACAGGCAACCCAACATCCAGATACCCGCCAAAATCCCACCGAttga > 2:2806678/1‑148 (MQ=255) tgtCTTACGGGCATCTGTGTTGCCTGTGGGGGCCTCTTGGCGGTTTAATGGGACCTCAATTTGTTGGAGGGGGTTCACCTGCTAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTcc < 2:1929453/150‑1 (MQ=255) gtgtGACGGGCATCTGTTTTGCGTGTGGGGGCCTGTTCGGGGGTTAATGGGACCTCACTTTTTTGGCGGGGTTTCACCTGCTAAGTGGCCCACACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTccc < 1:3358905/147‑1 (MQ=255) tttacgggAATCTGTGTTGCGTGTGGGGGCCTCTTGGGGGTTGAATGGGACCTAACTGTTTTGGCGGGGGTTCACCTGCGAAGAGGCCCACACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCtt < 1:2705160/145‑1 (MQ=255) ggcttatgtgtTGCCTTTGGGGGCTTTTGCGGGGGTTAATGGCCCCTCACTGTGTTGGGGGGGTTTCCCGTGCCCAGCGCCCCACACAGCCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTc < 1:1248077/143‑1 (MQ=255) ttGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgca < 1:4861037‑M2/150‑90 (MQ=255) TGCCTGTGCGGGCCTCTTCGGGGGTGAATGGTACCTAACTGTGTAGGAGCGGGTTCACCTGCTAAGAGGCCAACACAGGAAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAgg > 1:5627633‑M1/1‑150 (MQ=255) GCCTGTGCGGGCCTCTTCGCGGGTTAAAGGGACCTCACAGTGTTGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGga > 2:679997‑M1/1‑150 (MQ=255) GCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTTGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGga > 2:4090845‑M1/1‑150 (MQ=255) tgCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagag < 2:5799787‑M2/62‑9 (MQ=255) TGCGGGCCTCTTCGCGGGTGAAAGGGCCCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGacac > 2:747362‑M1/1‑150 (MQ=255) cGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGa > 2:3007898/1‑150 (MQ=255) gggCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggt < 1:5189965‑M2/150‑100 (MQ=255) gCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCa > 2:5625256/1‑150 (MQ=255) gCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCa > 1:4795869/1‑150 (MQ=255) ccTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgc < 2:3622630‑M2/150‑103 (MQ=255) ctctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATg > 2:6443744/1‑150 (MQ=255) tctTCGCGGGTTAAAGGTACCTCACTGTGTAGGAGCGGTTTCACCGGCTAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGa < 2:2460061/150‑1 (MQ=255) tctTCGCGGGTGAAAGGTACCTCACTGTTTTGGTGGGGGTTCACCTGCTAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGa < 2:1902751/150‑1 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccg < 1:1940156‑M2/150‑105 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccg < 2:1109402‑M2/150‑105 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGAcc > 1:5913383/1‑146 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGa > 2:5551841/1‑150 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGa > 1:417754/1‑150 (MQ=255) ttCGCGGGTTAATGGGACCTCACAGTTTAGGAGCGGGTTCACCTGCTAAGTGGCCCACACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc < 1:2790386/150‑1 (MQ=255) ttCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgcc < 1:5342498‑M2/150‑107 (MQ=255) ttCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCCAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc > 1:13618/1‑150 (MQ=255) ttCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc > 1:620723/1‑150 (MQ=255) ttCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc > 1:907615/1‑150 (MQ=255) ttCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc < 2:6198002/150‑1 (MQ=255) gggggTTAAGGGGACCACACTGTTTTGGGGGGGGTACCCCTGCTACGGGGCCCACACCGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTAt < 1:6555334/148‑1 (MQ=255) gcgGGTGAAAGGGACCTCACAGTGTTGGAGGGGGTTCACCTGCGAAGTGGCCAACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTAt < 1:2145253/150‑1 (MQ=255) tGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAGGAGCTATGTAAc > 1:5775439/1‑150 (MQ=255) aatgggACCTCACTGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCa < 2:5485136/147‑1 (MQ=255) aaaGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCa < 1:5551841/150‑1 (MQ=255) aGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACg > 1:6426536/1‑150 (MQ=255) gggACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGa < 2:3865483/150‑1 (MQ=255) gACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAg > 2:1509451/1‑150 (MQ=255) aCCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgccggggaagcggccgttg > 1:3129479‑M2/1‑28 (MQ=255) aCCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAgg > 1:1130576/1‑150 (MQ=255) tCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc < 1:3753256/131‑1 (MQ=255) tCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACg > 1:241055/1‑150 (MQ=255) cacaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACgg < 2:6389057/150‑1 (MQ=255) cacaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACgg > 2:3256301/1‑150 (MQ=255) cacaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACgg > 1:729500/1‑150 (MQ=255) cacaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACgg > 2:2721522/1‑150 (MQ=255) acaGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgccggggaagcggccgttgtcgat > 2:5528072‑M2/1‑23 (MQ=255) acaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGc < 2:2181954/150‑1 (MQ=255) aGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGt > 1:305634/1‑150 (MQ=255) aGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGt > 1:6755551/1‑150 (MQ=255) | AGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGT > NC_002947/4538455‑4538753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |