| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,538,609 | A→T | 8.4% | intergenic (+58/‑116) | PP_4020 → / → cpo | oxidoreductase/non‑heme chloroperoxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,538,609 | 0 | A | T | 8.4% | 578.0 / 4.9 | 206 | intergenic (+58/‑116) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase |
| Reads supporting (aligned to +/- strand): ref base A (92/87); new base T (3/17); total (100/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.90e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 207 total aligned reads displayed.
CGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGA > NC_002947/4538461‑4538758 | cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 2:2230952/150‑1 (MQ=255)cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 1:4608076/150‑1 (MQ=255)cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 1:1897065/150‑1 (MQ=255)cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 2:6668901/150‑1 (MQ=255)cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 1:5339801/150‑1 (MQ=255)cGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAg < 2:4263022/150‑1 (MQ=255) aaCGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGc < 2:1028526/150‑1 (MQ=255) cGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGAGCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCgg < 2:185624/150‑1 (MQ=255) cGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCgg < 1:5554973/150‑1 (MQ=255) cGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCgg < 1:1707565/150‑1 (MQ=255) cGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCgg < 2:4452312/150‑1 (MQ=255) ggCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCGCTTCGCGGGGGGAAGGGGCCTCACAGGGTAGGTGCggg > 2:4149695/1‑150 (MQ=255) cGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGGGCGGGGCGCATCGCGGGTGAAAGGGGCCCCCCCGGGGAGGAGCGGGGTc > 2:1387242/1‑150 (MQ=255) cTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCAc < 1:1308977/150‑1 (MQ=255) ttCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCGGTGGGGGCCTCGTAGCGGGGGGACGGGACCGCACACAGTAGGAGCGGGGTCAcc > 1:5691794/1‑150 (MQ=255) tCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCt < 2:1309330/150‑1 (MQ=255) tCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCt < 1:6126097/150‑1 (MQ=255) cccGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgc > 2:6269623‑M2/1‑148 (MQ=255) cccGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgc > 1:4559985‑M2/1‑148 (MQ=255) ccGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcg > 2:4833871‑M2/1‑147 (MQ=255) ccGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGTGCGGGGCGCATCGCGGGGGGAAGGGACCACACAGTGTAGGAGCGGGTTAACCAgcg < 2:260801‑M2/150‑4 (MQ=255) cggcggCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcga > 2:716904‑M2/1‑146 (MQ=255) ggcggcGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaa > 1:5640474‑M2/1‑145 (MQ=255) ggcggcGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaa > 2:6810419‑M2/1‑145 (MQ=255) ggcggcGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaa > 1:1617338‑M2/1‑145 (MQ=255) gcggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaag > 1:2953564‑M2/1‑144 (MQ=255) tcatggtcgtgtctcctgggtgcaggaagcgaagggagctattgagaataggagggattttggcgggtatcaggaagttGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAaga > 1:923108‑M1/80‑150 (MQ=255) tcatggtcgtgtctcctgggtgcaggaagcgaagggagctattgagaataggagggattttggcgggtatcaggaagttGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAaga > 1:813834‑M1/80‑150 (MQ=255) cggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaaga > 1:44716‑M2/1‑143 (MQ=255) cggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaaga > 2:2371670‑M2/1‑143 (MQ=255) cggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaaga > 2:4994974‑M2/1‑143 (MQ=255) ggcgACCTGCTGGCTGCGCCTTTGGAGGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGCCCGCACAGTGTAGGAGCGGGTTCACCTgcggcgag < 2:6725934‑M2/150‑9 (MQ=255) ggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagag > 2:4210096‑M2/1‑142 (MQ=255) catggtcgtgtctcctgggtgcaggaagcgaagggagctattgagaataggagggattttggcgggtatcaggaagttGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAagag > 1:3334493‑M1/79‑150 (MQ=255) gcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGACATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagagg > 2:856565‑M2/1‑141 (MQ=255) gACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCGGTGCGGGGCGCGTCGCGGGGGTAAGGGTCCGCCACGTGTGGGGGCGGGTTAACCAGCGAAGTGGcc > 1:2181954/1‑150 (MQ=255) tcgtgtctcctgggtgcaggaagcgaagggagctattgagaataggagggattttggcgggtatcaggaagttGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCca > 1:4331969‑M1/74‑150 (MQ=255) gtctcctgggtgcaggaagcgaagggagctattgagaataggagggattttggcgggtatcaggaagttGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCcacaca > 2:4351460‑M1/70‑150 (MQ=255) ctggctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCcacaca < 2:5466133/150‑1 (MQ=255) tggctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAg < 2:4404337/150‑1 (MQ=255) gctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGc < 1:1672838/150‑1 (MQ=255) tgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCaa < 1:2069970/150‑1 (MQ=255) tgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGGGCGGGCCTCTTCGCGGGGGGAAGGGCCCGCCCCGTGGAGGTGCGGGGTGACCAGCGACGAGGCCCACACAGGCac > 2:3182334/1‑149 (MQ=255) cgcCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCTGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAACGGGACCTCACTGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAaca < 2:4118444/150‑1 (MQ=255) tGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCAGTGCGGGCCTCTTAGCGGGTGAAAGGGACCACACACTGTAGGAGCGGGTTCACCAGCGAAGAGGCCCACACAGGCACCACAAcat > 2:3935436/1‑148 (MQ=255) ggAACCTGCGGCCCCGGCCGGGCACCGCACGCGCGCCCGGGTCTGACGGGCATCAGTGTTGCCTGTGCTTGCCTGTTCGCGGGTGAACGGTAAACAACAGTGTTTGGGCGGGTTCACCGGCGAAGAGGCCCACACAGGCAACACAACTTc < 2:3408863/150‑1 (MQ=255) gacgCTGGGGCAACGGCCTGGTACCGCATGCGCGCCCGTGCGTGACGGGCATCAGTGTTGCCTGGGCGGCCCTCGTCGCGGGTGAAAGGGACCTCACAGTGTTGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTcc < 2:1827079/147‑1 (MQ=255) ggaaacggCCGGGTACCGCATGCGCGACCGTGTCTGACGGGCATCCGTGTTGCCTGGGGGGGCCTCTGCGCGGGTTAAAGGGACCACACAGTGTTGGCGGGGTTTCACCTGCGATGAGGCCCACACAGGCAACACAACTTCCTGATAccc < 1:4529862/144‑1 (MQ=255) gCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCGCATGGCGGGTGGAAGGGACCACACACGGGAGGAGCGGGTTGACCGGCCACGAGGCCCCCACCGGCCACAAAACATACAGATAaccc > 2:4761223/1‑149 (MQ=255) cAACGGCCTGGTACCGCTTGCGCGACGGTGTCTGACGGGCATCTGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACTGTGTAGGAGCGGGTTCACCTGCTAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGc < 2:3701650/150‑1 (MQ=255) aGGCCTGGTACCGCTTGCGCGACCGTGTCTGAAGGGCATCTGTGTTGCGTGTGCGGGCATCTTCGCGGTTGAAAGGGACCCCACTGTGTAGGTGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCaa < 2:2370939/150‑1 (MQ=255) gCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCaaaa < 2:6403688/150‑1 (MQ=255) cTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGa < 1:4905742/89‑1 (MQ=255) tcccGCAGGCGCGCCCGGGTCTGACGGGCATCCGTGTGGCCTGTGCGGGCCTCTGCGGGGTTGAAAGGTACCTCACAGTGTTGGCGCGGTTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctc < 2:2486006/148‑1 (MQ=255) ccGCATGCGCGCCCGTGTCTGAAGGGCATCAGTGGTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctcct < 2:1200469/150‑1 (MQ=255) tGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCAGTGCGGGCCTCTTCGCGGGTGAAAGGGACCGCACAGTGTAGGAGCGGGGTCACCAGCGAAGAGGCCCACACAGGCAACCCAACATCCAGATACCCGCCAAAATCCCACCGAttga > 2:2806678/1‑148 (MQ=255) tgtCTTACGGGCATCTGTGTTGCCTGTGGGGGCCTCTTGGCGGTTTAATGGGACCTCAATTTGTTGGAGGGGGTTCACCTGCTAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTcc < 2:1929453/150‑1 (MQ=255) gtgtGACGGGCATCTGTTTTGCGTGTGGGGGCCTGTTCGGGGGTTAATGGGACCTCACTTTTTTGGCGGGGTTTCACCTGCTAAGTGGCCCACACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTccc < 1:3358905/147‑1 (MQ=255) tttacgggAATCTGTGTTGCGTGTGGGGGCCTCTTGGGGGTTGAATGGGACCTAACTGTTTTGGCGGGGGTTCACCTGCGAAGAGGCCCACACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCtt < 1:2705160/145‑1 (MQ=255) aaGGGCATCTGGGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTTGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGc < 2:4663102/150‑1 (MQ=255) gCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTcc < 2:5550391/150‑1 (MQ=255) ttGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgca < 1:4861037‑M2/150‑90 (MQ=255) tgtgCGGGCCTCTTCGCGGGTGAAGGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccag < 2:659484‑M2/150‑95 (MQ=255) tgCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagag < 2:5799787‑M2/62‑9 (MQ=255) cGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGa > 2:3007898/1‑150 (MQ=255) gggCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggt < 1:5189965‑M2/150‑100 (MQ=255) ggCCTGTTCGCGGGTTAACGGGACCACACTGTTTAGGCGCGGGTACCCCTGCTAAGCGGCCAACACTGCAAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGAcc < 1:4082284/150‑1 (MQ=255) ggCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGCGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGAcc < 2:4010500/150‑1 (MQ=255) gCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCa > 1:4795869/1‑150 (MQ=255) gCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCa > 2:5625256/1‑150 (MQ=255) ccTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgc < 2:3622584‑M2/150‑103 (MQ=255) ctctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgcc < 1:2121709‑M2/150‑104 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTTGGAGCGGGTTCACCTGCTAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGa < 2:6515950/150‑1 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccg < 1:1940156‑M2/150‑105 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccg < 2:1109402‑M2/150‑105 (MQ=255) tctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGAcc > 1:5913383/1‑146 (MQ=255) ttCGCGGGTTAATGGGACCTCACAGTTTAGGAGCGGGTTCACCTGCTAAGTGGCCCACACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc < 1:2790386/150‑1 (MQ=255) ttCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc > 1:620723/1‑150 (MQ=255) ttCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc > 2:5943142/1‑150 (MQ=255) gggggTTAAGGGGACCACACTGTTTTGGGGGGGGTACCCCTGCTACGGGGCCCACACCGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTAt < 1:6555334/148‑1 (MQ=255) gcgGGTTAAAGGGACCTCACTGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTAt < 1:5635667/150‑1 (MQ=255) tGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAGGAGCTATGTAAc > 1:5775439/1‑150 (MQ=255) aaaGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATg > 1:146245/1‑144 (MQ=255) aaaGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCa < 2:5485158/150‑1 (MQ=255) aGGGACCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccacacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgccggggaagcggcc < 1:5528072‑M2/150‑119 (MQ=255) aGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAATTCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACg > 1:243350/1‑150 (MQ=255) aGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACg > 1:6426536/1‑150 (MQ=255) gggACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGa < 2:3865451/150‑1 (MQ=255) ggACCTCACTGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGaa < 2:604311/150‑1 (MQ=255) gACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAg > 2:1509451/1‑150 (MQ=255) aCCTCACAGTGTAGGAGCGGGTTCACCTgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgccggggaagcggccgttg > 1:3129479‑M2/1‑28 (MQ=255) aCCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAgg > 1:1130576/1‑150 (MQ=255) tCACAGTGTAGGCGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACg < 2:6871279/150‑1 (MQ=255) tCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGc > 2:3753256/1‑131 (MQ=255) tCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACg > 1:5437811/1‑150 (MQ=255) cacaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACgg > 2:3256301/1‑150 (MQ=255) cacaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACgg > 2:2721522/1‑150 (MQ=255) acaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGc < 2:2181954/150‑1 (MQ=255) aGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGt > 1:305634/1‑150 (MQ=255) aGGAGCGGTTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGa < 1:6731045/150‑1 (MQ=255) | CGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGA > NC_002947/4538461‑4538758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |