BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,612,400	A→C	5.3%	R26S (AGA→AGC)	PP_4079 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,612,400	0	A	C	5.3%	979.2 / 30.0	285	R26S (AGA→AGC)	PP_4079	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (141/128); new base C (5/10); total (146/139)
Fisher's exact test for biased strand distribution p-value = 1.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01

Only 100 of 302 total aligned reads displayed.

CCTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATCCTGGA  >  NC_002947/4612251‑4612549

ccTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCaga                                                                                                                                                       <  2:6437131/150‑1 (MQ=255)

ccTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCaga                                                                                                                                                       <  2:4408854/150‑1 (MQ=255)

ccTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCaga                                                                                                                                                       <  2:4310995/150‑1 (MQ=255)

  tGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGc                                                                                                                                                     >  2:846668/1‑150 (MQ=255)

       cggACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGccacca                                                                                                                                                >  2:6656414/2‑150 (MQ=255)

         gACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAg                                                                                                                                              >  2:5980075/1‑150 (MQ=255)

          aCCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAgg                                                                                                                                             <  1:3508093/150‑1 (MQ=255)

             aGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTgg                                                                                                                                          <  2:4719524/150‑1 (MQ=255)

             aGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTgg                                                                                                                                          <  2:2870860/150‑1 (MQ=255)

                  cgtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTg                                                                                                                                     <  1:6383537/150‑1 (MQ=255)

                   gtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTgg                                                                                                                                    >  1:3807279/1‑150 (MQ=255)

                   gtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTgg                                                                                                                                    <  1:707943/150‑1 (MQ=255)

                    tcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGa                                                                                                                                   <  1:275643/150‑1 (MQ=255)

                    tcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGa                                                                                                                                   >  2:2497605/1‑150 (MQ=255)

                     cgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGAc                                                                                                                                  <  2:2274619/150‑1 (MQ=255)

                       aTGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCa                                                                                                                                <  2:106986/150‑1 (MQ=255)

                         gACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACt                                                                                                                              <  1:1326661/150‑1 (MQ=255)

                            cACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGt                                                                                                                           >  1:1122400/1‑150 (MQ=255)

                            cACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGt                                                                                                                           >  1:5504350/1‑150 (MQ=255)

                            cACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGt                                                                                                                           >  1:3753112/1‑150 (MQ=255)

                              cGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTa                                                                                                                         <  2:722944/150‑1 (MQ=255)

                                aTGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTAcc                                                                                                                       <  2:1636025/150‑1 (MQ=255)

                                 tGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCa                                                                                                                      >  1:5425620/1‑150 (MQ=255)

                                            gTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGgccgcc                                                                                                           <  2:172775/150‑1 (MQ=255)

                                             tCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGccc                                                                                                          >  1:3028676/1‑150 (MQ=255)

                                             tCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGccc                                                                                                          >  1:4567659/1‑150 (MQ=255)

                                             tCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTAGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGccc                                                                                                          >  2:1950398/1‑150 (MQ=255)

                                                cGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAg                                                                                                       >  1:5064605/1‑150 (MQ=255)

                                                     tCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaa                                                                                                  <  2:3807279/150‑1 (MQ=255)

                                                      ccGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaac                                                                                                 <  2:6761661/150‑1 (MQ=255)

                                                      ccGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaac                                                                                                 <  2:6158327/150‑1 (MQ=255)

                                                       cGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaacc                                                                                                <  2:3549448/150‑1 (MQ=255)

                                                       cGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaacc                                                                                                >  2:5144816/1‑150 (MQ=255)

                                                          ttCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaacccaa                                                                                             >  2:5061985/1‑150 (MQ=255)

                                                               ggggCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAAcccaacccaa                                                                                        >  2:1138704/1‑150 (MQ=255)

                                                               ggggCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAAcccaacccaa                                                                                        <  1:301147/150‑1 (MQ=255)

                                                               ggggCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAAcccaacccaa                                                                                        <  2:3764085/150‑1 (MQ=255)

                                                               aggcggctCATGA‑CCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGAACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAg                                                                                       >  2:1896080/8‑150 (MQ=255)

                                                                    ggTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTcgc                                                                                   >  2:5845627/1‑150 (MQ=255)

                                                                        aTGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTc                                                                               <  2:4902460/150‑1 (MQ=255)

                                                                         tGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCa                                                                              <  2:2436765/150‑1 (MQ=255)

                                                                           aGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGc                                                                            <  1:6230500/150‑1 (MQ=255)

                                                                           aGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGc                                                                            <  2:366371/150‑1 (MQ=255)

                                                                            gccgccTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCa                                                                           >  2:4236590/1‑150 (MQ=255)

                                                                             ccgccTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCAt                                                                          >  1:3632610/1‑150 (MQ=255)

                                                                              cgccTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATc                                                                         <  2:6335000/150‑1 (MQ=255)

                                                                                 cTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAAc                                                                      <  2:3138758/150‑1 (MQ=255)

                                                                                  tGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACg                                                                     >  1:630868/1‑150 (MQ=255)

                                                                                    gCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTc                                                                   >  2:1002350/1‑150 (MQ=255)

                                                                                       gTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGc                                                                <  2:5587870/150‑1 (MQ=255)

                                                                                          tGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCa                                                             >  1:3306447/1‑150 (MQ=255)

                                                                                              ttGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGc                                                         >  2:2609382/1‑150 (MQ=255)

                                                                                                gcgcCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTc                                                       <  2:3176199/150‑1 (MQ=255)

                                                                                                 cgcCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCa                                                      >  2:522738/1‑150 (MQ=255)

                                                                                                 cgcCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCa                                                      <  1:1011624/150‑1 (MQ=255)

                                                                                                  gcCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCaa                                                     >  2:2218513/1‑150 (MQ=255)

                                                                                                  gcCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCaa                                                     >  2:1588966/1‑150 (MQ=255)

                                                                                                  gcCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCaa                                                     <  1:4794166/150‑1 (MQ=255)

                                                                                                   ccTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAAc                                                    <  1:3921418/150‑1 (MQ=255)

                                                                                                   ccTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAAc                                                    <  1:501303/150‑1 (MQ=255)

                                                                                                    ctctGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCGCCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACa                                                   >  2:4176953/1‑150 (MQ=255)

                                                                                                     tctGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAg                                                  >  2:5101219/1‑150 (MQ=255)

                                                                                                     tctGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAg                                                  >  2:4342724/1‑150 (MQ=255)

                                                                                                     tctGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAg                                                  >  2:575881/1‑150 (MQ=255)

                                                                                                         ctggtcgtgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCacc                                              >  2:4847230/1‑148 (MQ=255)

                                                                                                         ctggtcgtgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAAc                                              >  1:1945698/1‑150 (MQ=255)

                                                                                                          tggtcgtgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAAcc                                             >  2:362871/1‑150 (MQ=255)

                                                                                                              cgtgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGaa                                         <  1:6800034/150‑1 (MQ=255)

                                                                                                                tgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACa                                       >  1:4686719/1‑150 (MQ=255)

                                                                                                                tgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACa                                       >  2:3424601/1‑150 (MQ=255)

                                                                                                                  ctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAgt                                     <  2:5262385/150‑1 (MQ=255)

                                                                                                                   tggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGGTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGACCAgtg                                    >  2:4571980/1‑150 (MQ=255)

                                                                                                                        ggACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGAc                               >  1:6175546/1‑150 (MQ=255)

                                                                                                                        ggACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGAc                               >  1:1483016/1‑150 (MQ=255)

                                                                                                                         gACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACg                              >  1:6530838/1‑150 (MQ=255)

                                                                                                                          aCTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGt                             <  2:178941/150‑1 (MQ=255)

                                                                                                                               cAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTggcgg                        >  2:4820558/1‑150 (MQ=255)

                                                                                                                               cAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTggcgg                        >  1:2235163/1‑150 (MQ=255)

                                                                                                                                   ttGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCAt                    >  2:1406352/1‑150 (MQ=255)

                                                                                                                                     gCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATcc                  <  2:6025291/150‑1 (MQ=255)

                                                                                                                                      cACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATccc                 >  1:6080848/1‑150 (MQ=255)

                                                                                                                                       aCGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTAGCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCCACGTCAGCCCATCGCTCAACAGCACCCCGCTCAGTGTCGACGTGGCGGCCATcccg                >  2:5357016/1‑149 (MQ=255)

                                                                                                                                       aCGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCt                >  1:2595773/1‑150 (MQ=255)

                                                                                                                                       aCGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCt                <  2:6251797/150‑1 (MQ=255)

                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              <  1:4119080/150‑1 (MQ=255)

                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              <  2:479385/150‑1 (MQ=255)

                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              >  1:5653268/1‑150 (MQ=255)

                                                                                                                                           ccTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCACCCCGAACAGTGTCGACGTGGCGGCCATCCCTgaga            <  2:4965035/150‑1 (MQ=255)

                                                                                                                                           ccTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTgaga            <  1:6056792/150‑1 (MQ=255)

                                                                                                                                            cTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGagag           >  2:1215508/1‑150 (MQ=255)

                                                                                                                                            cTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGagag           >  1:772841/1‑150 (MQ=255)

                                                                                                                                            cTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGagag           <  1:5950483/150‑1 (MQ=255)

                                                                                                                                             ttGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGc          >  1:5186086/1‑150 (MQ=255)

                                                                                                                                             ttGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGc          >  1:398106/1‑150 (MQ=255)

                                                                                                                                              tGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCa         >  1:2904584/1‑150 (MQ=255)

                                                                                                                                                aGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATc       <  1:846668/150‑1 (MQ=255)

                                                                                                                                                 gCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATcc      >  1:1580919/1‑150 (MQ=255)

                                                                                                                                                 gCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATcc      <  1:4933525/150‑1 (MQ=255)

                                                                                                                                                  cAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATCCt     <  1:2418039/150‑1 (MQ=255)

                                                                                                                                                   agagCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATCCTg    <  2:5367405/150‑1 (MQ=255)

CCTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATCCTGGA  >  NC_002947/4612251‑4612549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`