| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,730,035 | G→A | 8.5% | intergenic (+25/+43) | PP_5661 → / ← PP_4183 | putative lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,730,035 | 0 | G | A | 8.5% | 817.0 / 39.5 | 273 | intergenic (+25/+43) | PP_5661/PP_4183 | putative lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (91/158); new base A (4/19); total (95/178) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.10e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
CGAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTACA > NC_002947/4729887‑4730184 | gccgccGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTc < 1:2421228/150‑1 (MQ=255) ccgccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCg < 2:5712580/150‑1 (MQ=255) ccgccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCg < 2:3575136/150‑1 (MQ=255) cgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGACGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGACCCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGtt < 1:4139238/150‑1 (MQ=255) cgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGtt < 1:3764878/150‑1 (MQ=255) aGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGtttt < 1:832261/150‑1 (MQ=255) aGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGtttt < 1:4930777/150‑1 (MQ=255) aGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGtttt < 1:2194759/150‑1 (MQ=255) aGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGtttt < 1:2919323/150‑1 (MQ=255) ggAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGttttt < 1:5378829/150‑1 (MQ=255) ggAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGttttt < 1:5005261/150‑1 (MQ=255) ggAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGttttt < 2:5464151/150‑1 (MQ=255) aacaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGttttttt < 1:5570005/147‑1 (MQ=255) aaaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGttttttt < 2:1204683/150‑1 (MQ=255) aaaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGttttttt < 1:5130853/150‑1 (MQ=255) aaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGttttttt > 2:717923/1‑149 (MQ=255) aaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTtgt > 2:3940397/1‑150 (MQ=255) aCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACATCGTCGGGTTTTTTtgtt < 1:1374143/150‑2 (MQ=255) gCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAGGTCGGGTTTTTTTGTGcc > 2:4362724/1‑150 (MQ=255) ccGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCt < 1:4857623/150‑1 (MQ=255) cGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTg > 2:2457793/1‑150 (MQ=255) cGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAGGTCGGGTTTTTTTGTGCCTg > 2:3381119/1‑150 (MQ=255) gAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGc < 1:6186441/150‑1 (MQ=255) gAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGc < 1:4669797/150‑1 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc > 2:1522702/1‑150 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc > 2:2575110/1‑150 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc > 2:5889127/1‑150 (MQ=255) cAAAGAACAGCCCGCAGCCGAGCAGACGGCTGCCGAACAACCCGCTCCGGCTACACCGGCTCCGACTACACCCGCAGAACCTGCAAAGCCGTAATTGGCTAAAACAAAAAAACCCGACCATGTCGGGTTTTTTTGTGCCTGCGAACTTTc < 2:373890/150‑1 (MQ=255) aaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCCGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGa < 1:3095941/150‑1 (MQ=255) aaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGa < 2:1385727/150‑1 (MQ=255) aaGATCAGGCCGAAGCCGAGCAGAAGACTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGa < 2:2772100/150‑1 (MQ=255) aGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGAt < 1:1362581/150‑1 (MQ=255) gATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGAtt > 1:3506590/1‑150 (MQ=255) cAGGCCGAAGCCGTGCTGTAGGCTGACGACGAAGCCGCTCCGGCTACTCCGGCTCCTAATACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAATCAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGATCTTTCGATTAAt < 1:5019398/150‑1 (MQ=255) cAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAAt < 1:2814139/150‑1 (MQ=255) aGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATc < 1:973042/150‑1 (MQ=255) aGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATc < 2:1259641/150‑1 (MQ=255) ggCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCg > 1:3954283/1‑150 (MQ=255) ccGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGtt < 1:2977425/150‑1 (MQ=255) cGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGttt < 2:1865484/150‑1 (MQ=255) gCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGt < 2:3058051/150‑1 (MQ=255) ccGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGtt < 2:6798729/150‑1 (MQ=255) cGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTg > 2:5353437/1‑150 (MQ=255) gAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaaca > 2:3335342/1‑150 (MQ=255) ggCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAAcc < 1:5502615/150‑1 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGACCTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg > 2:4164448/1‑150 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg < 2:62065/150‑1 (MQ=255) gaagaaGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCttt > 2:6590606/1‑150 (MQ=255) aagaagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTc < 1:1207884/150‑1 (MQ=255) aagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCtt < 2:3221951/150‑1 (MQ=255) agCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTg < 1:4003790/150‑1 (MQ=255) agCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATGGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTg < 1:1837168/150‑1 (MQ=255) gCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTgg > 1:6707517/1‑150 (MQ=255) gCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTgg > 2:1173755/1‑150 (MQ=255) gCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTGTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTgg > 2:4863098/1‑150 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGcc > 1:6348238/1‑150 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGCAAACAACCGAGCTTTCCTTGGcc < 1:3220300/150‑1 (MQ=255) cTCCGGCTACTCCGGCTCCTACTACACCGGCAGAATCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCgg < 2:1275900/150‑1 (MQ=255) cTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAGGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCgg < 1:1078721/150‑1 (MQ=255) cGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTc > 2:472188/1‑150 (MQ=255) cGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTc < 1:6221017/150‑1 (MQ=255) ggCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTcc > 2:1786327/1‑150 (MQ=255) ggCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTcc < 1:4505759/150‑1 (MQ=255) tCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt > 2:2976762/1‑150 (MQ=255) ccGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTa > 1:6786432/1‑150 (MQ=255) gatCCTACTACACCGGCAGAAACTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTacac < 2:2680397/148‑1 (MQ=255) tCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACtt < 1:515322/150‑1 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtc < 1:3864494/150‑1 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt < 1:2575110/150‑1 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt > 2:726410/1‑150 (MQ=255) cGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGgtgt < 1:4982969/150‑1 (MQ=255) cAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGaa < 2:1647638/150‑1 (MQ=255) cAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGaa < 1:6151753/150‑1 (MQ=255) gAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAaca > 2:3999353/1‑150 (MQ=255) gAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAaca < 1:6609101/150‑1 (MQ=255) cTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCAt > 1:5703724/1‑150 (MQ=255) tGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATc > 2:1055880/1‑150 (MQ=255) gCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATca < 2:6632075/150‑1 (MQ=255) gCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATca < 1:2682588/150‑1 (MQ=255) ccAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATcac < 1:1603792/150‑1 (MQ=255) aGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATc < 1:3644566/150‑1 (MQ=255) gCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCGTGGCCGGCTCCGCCAGTACACTTTCGGTCGGTGTGAACACCATCACATCg > 1:1771048/1‑150 (MQ=255) cAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa < 1:3334945/150‑1 (MQ=255) cAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa < 2:5605353/150‑1 (MQ=255) cAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa > 2:6461922/1‑150 (MQ=255) aGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTgg < 2:6285081/101‑1 (MQ=255) cTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGa < 2:5245732/150‑1 (MQ=255) tAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGaa > 2:2731814/1‑150 (MQ=255) tAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGaa < 2:5142300/150‑1 (MQ=255) tAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGaa > 1:3457574/1‑150 (MQ=255) aaaaCAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAAt < 1:5781148/150‑1 (MQ=255) aaaaCAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAAt > 2:2087725/1‑150 (MQ=255) aaCAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACtt > 2:4147025/1‑108 (MQ=255) aaaaaCCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActc > 2:4979550/1‑150 (MQ=255) aaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACtctc > 1:166748/1‑150 (MQ=255) aaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACtctc < 2:868635/150‑1 (MQ=255) gacgaTGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGt > 1:5641000/1‑150 (MQ=255) gacgaTGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGt > 1:4749789/1‑150 (MQ=255) acgaTGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTa < 1:1875684/150‑1 (MQ=255) gaTGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCAGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTACa < 1:885995/150‑1 (MQ=255) | CGAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTACA > NC_002947/4729887‑4730184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |