| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,745,836 | T→A | 20.8% | intergenic (+78/+674) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,745,836 | 0 | T | A | 20.8% | 376.4 / 117.7 | 226 | intergenic (+78/+674) | gltA/yeiW | citrate synthase/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (94/59); new base A (23/22); total (121/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.71e-02 | |||||||||||
Only 100 of 230 total aligned reads displayed.
ATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCT > NC_002947/4745687‑4745984 | aTCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCtt < 2:776233/150‑1 (MQ=255) cGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGc < 1:6165443/150‑1 (MQ=255) ggCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGcc < 2:6690473/150‑1 (MQ=255) ccGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGGCGCGTGGCGGCCGTGcccc > 1:1175698/1‑149 (MQ=255) ccGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCGTAGCGGCCGTTcccc > 1:356635/1‑149 (MQ=255) cGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCcgc < 1:628906/150‑1 (MQ=255) gTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTAGCGGCCTTGCCcgcg > 1:1617686/1‑150 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 2:1900276/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 2:1173920/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa < 2:6837071/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa < 2:245636/150‑1 (MQ=255) ccGCGCCAGCCGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 1:4579783/150‑1 (MQ=255) cgcgCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAag < 2:454778/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 2:3770362/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 1:1815236/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:1491511/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:212169/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:100010/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑‑CTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAagag < 1:6397113/150‑1 (MQ=39) gcgcCAGCTGGACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 1:2554327/150‑1 (MQ=255) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGACAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAagag < 2:2214330/150‑1 (MQ=255) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAagag < 1:1223823/150‑1 (MQ=255) gcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAgg < 1:5851814/150‑1 (MQ=255) ccAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGc < 1:4943665/150‑1 (MQ=255) aGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTTAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGCCg < 2:4414165/150‑1 (MQ=39) tGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGca > 2:1525782/1‑150 (MQ=255) gTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCCCGAAGAGGCCGGcac > 1:4453756/1‑150 (MQ=255) cacCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGa > 2:4738291/1‑150 (MQ=255) cGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTACGCGGCAGTAGCCGAACGCAAGACGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGGGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGacac < 2:3815323/150‑1 (MQ=255) cGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCGTCGCGGCCTTGCCCGCGGAGAGGCCGGCACAGacac > 2:2347397/1‑150 (MQ=255) aGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAAc > 2:1054776/1‑150 (MQ=255) aaGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCGCTTCGCGGCCGGGGCCGCGAACAGGCCGGCCCCCACACCCCaaaaaca > 1:1779614/1‑147 (MQ=255) gcgcTACATCGTGGCCCTGAAAGACCGCATGTAAGCTGCCGTAGCCTATCGCACGTTGGCTGCCCTCGGGCAGACTTTTTTATTTGT‑CGTGTGCCGGCCTCTTCGGGGCCTGGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCa < 2:2155048/150‑1 (MQ=255) cgACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCTGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTTTTTGT‑CCTGGGCCGGCCTCTTCGCGGCATTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGtt < 2:3969715/150‑1 (MQ=255) cgACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGTCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCCGCACAGAAACCACAAAAACACAgat > 1:4889896/1‑148 (MQ=255) cccTGAACGACCGCACGTACGCTGCCGTCGCCGACCGCAAGATGGCTGCCGGCGGGCTGCCTTTTTTTTTTGT‑CCTGGGCCGGCCTATTCGCGGCGTGGCCCGCGACGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTccgccc < 2:4617981/150‑1 (MQ=255) ccTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTAGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTccgcccg > 2:5894067/1‑150 (MQ=255) cTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCGTGCCCGCGAAGAGGCCGGCACAGACACCACCAAACCTCAGTTTTTATccgcccgc > 1:3349629/1‑150 (MQ=255) aaaGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCGTGCCCGCGAAGAGGCCGGCCCCGGCACCACACAACCGCCCGGTGTCTCCGCCCGCGCa > 1:5367380/1‑150 (MQ=255) aaaGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTGCGCGGCCTTGCCCGCGAAGTGGCCGGCACCTACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCa > 2:530933/1‑150 (MQ=255) aGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGATTTTCTCCGCCCGCTCAcc > 2:5735187/1‑149 (MQ=255) cccGCAAGTAAGGTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGGGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCa < 2:4200704/149‑1 (MQ=255) gCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCCGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCGCACGCAGcc > 2:2563344/1‑150 (MQ=255) gCTGCAGTAGCCGAACGCAATAAGGCTGCCCTGGGGCTGCATTTTTTATTTGT‑CCTGTGCCGGCCTCTGCGCGGCCTGGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAgg < 2:3657606/150‑1 (MQ=255) gCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTGTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAgg > 2:5045954/1‑150 (MQ=255) cgtGCAGTCCCCCAACCCAAGACGCCTCCCCCGGGGAACCATTTTTTATTTGC‑CCTGGGCCGGCATCTGCGCGGCGTGGCCCGCCACGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAgg < 1:2653828/148‑1 (MQ=255) gCCTAACGAAAGATGGGTGCCCTCGGGCCGAATTTTTT‑TTTGTGCCTGGGCCGGCCACTTCGGGGCCTGGCCCGCTATGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAAc < 1:4878318/150‑1 (MQ=255) ccGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga > 1:4389921/1‑79 (MQ=25) ccGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 2:4389921/79‑1 (MQ=25) cGAACGCACGACGGCGGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGGGGCGTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACgg < 2:4823688/150‑1 (MQ=255) gacggCAAGACGGCTGCCCGGGGGCCGCCTTTTTTTTTTGT‑CCTGTGCCGGCCTCTTCGGGGCCTTGCCCGCGACGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc < 2:3428370/146‑1 (MQ=255) gaccGCACGACGGCGGCCCGCGGGCAGCCTTTTTTATTTGT‑CCTGGGCCGGCCGCTTCGCGGCCTGGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc < 2:4080773/147‑1 (MQ=255) gAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTTTTGGG‑CGTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAATAGGCCGGCACAGACACCACAACACCTCCGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc < 2:5867431/150‑1 (MQ=255) gAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCGCGTCGCGGCCGTGCCCGCGAAGAGGCCGGCCCAGACACCACAAAACCACAGTTTTTATCCGCCCCCGCACGCAGCCCGTTAAGGGTGGTGAACGgc > 1:1553800/1‑150 (MQ=255) aaaaagGCTGCCCGAGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATcc > 2:2773498/4‑150 (MQ=255) aaaagGCTGCCCGAGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCGCTTCGCGGGCGTGCCCGCGGAGTGGCCCGCACCGGCACCCCAAAACCGCCGTTTTTATCCGCCCCCTCACGCAGCCCGTTGCGGGTGTTGTAAGGCGCATcca > 1:2088395/3‑150 (MQ=255) tGCCCTGGGGCTGCTTTTTTTTTTGGC‑CGTGGGCGGGCATCTTCGGGGCGTTGCCCGCGACGTGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGaa < 1:4065334/150‑1 (MQ=255) tGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTAGCGGCCGTGGCCGCGGAGGGGCCGGCCCAGAAACCACAAAACCACAGTTTTTCTCCGCCCCCGCACGCCGCCCGTTAAGGGTCTTGAACGGCGCCTCCACCCCGaa > 1:5993278/1‑150 (MQ=255) cTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACttg > 2:2191730/1‑150 (MQ=255) gggCAGCATTTTTTTTTTGT‑CCTGTGCGGGCCTGTGGGCGGCCTTGCCCGCTACGCGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACttgttg < 1:5452756/150‑1 (MQ=255) gctggcTTTTTTTTTTGT‑CGTGTGCGGGCTTCTTCGCGGCCTTGCCCGAGATGTGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCCGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGc < 2:1371932/145‑1 (MQ=255) ttttttATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCATGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACCCAGCCCAGTCAGGGTATTGAAAGGCGCATCCACCACGAACTTGTTGGccaccag > 2:5472297/1‑149 (MQ=39) tttATTTGT‑CGTGCCCCGCCCTCTGCGGGGCCGGGCCGGCGAAGAGGCCGGCACAGACACCACAACACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGc < 1:2316614/150‑1 (MQ=255) tATTGGT‑CCTGTGCCGGCCTCTGCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCg < 2:1766322/150‑1 (MQ=255) tgCCGGCCTCTTCGCGGCGTGGCCCGCGACGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTacca < 2:3165111/150‑1 (MQ=255) gCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGATaccac < 2:4453756/150‑1 (MQ=255) ggCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTg > 1:6020349/1‑150 (MQ=255) gCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTgg > 2:1693258/1‑150 (MQ=255) ctctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc < 2:3870873/98‑1 (MQ=255) ctctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc > 1:3870873/1‑98 (MQ=255) ctctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt > 2:816627/1‑150 (MQ=255) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:2335308/1‑150 (MQ=255) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:6476316/1‑150 (MQ=255) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:6511531/1‑150 (MQ=255) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGATTTTCTCCGCCCGCTCACGCAGCCCTTTCAGCGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGAACGCTACCACCTGGCTc > 2:3506488/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:3653490/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:375503/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:5175424/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:3907683/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:4628469/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:4712696/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:6615929/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:809638/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:2880405/1‑150 (MQ=255) ctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg > 1:4344410/1‑150 (MQ=255) ctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg > 1:111094/1‑150 (MQ=255) ctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg > 2:3214346/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGGCACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 2:1724713/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACCCCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:1739293/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:5201483/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:2812876/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:350154/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 2:2127468/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:688501/1‑150 (MQ=255) ttCGCGGCCTTGCCCGCGAAGCGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg < 2:2384741/150‑1 (MQ=255) ttCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 2:6375192/1‑150 (MQ=255) cgcgGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgtg > 1:2989362/1‑150 (MQ=255) cgcgGCCTTCCCCGCGAAGCGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgtg < 1:2941280/150‑1 (MQ=255) cgGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGtgtg > 1:4995516/1‑150 (MQ=255) ttGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCt > 1:1045030/1‑150 (MQ=255) | ATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGT‑CCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCT > NC_002947/4745687‑4745984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |