| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,823,214 | C→T | 5.2% | intergenic (+121/+16) | PP_4242 → / ← pvdL | conserved protein of unknown function with Rhs repeat‑associated core domain/non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,823,214 | 0 | C | T | 5.2% | 924.0 / 24.0 | 288 | intergenic (+121/+16) | PP_4242/pvdL | conserved protein of unknown function with Rhs repeat‑associated core domain/non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base C (153/120); new base T (5/10); total (158/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 294 total aligned reads displayed.
TTCTAAGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCAGCG > NC_002947/4823065‑4823363 | ttCTAAGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGcc > 2:5363776/1‑150 (MQ=255) tAAGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAg < 2:2641719/150‑1 (MQ=255) aaGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAgc < 2:2082002/150‑1 (MQ=255) aaGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAgc > 1:2391072/1‑150 (MQ=255) aGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAgcg > 2:5379719/1‑150 (MQ=255) gggAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAgcgc < 1:4066099/150‑1 (MQ=255) gggAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAgcgc > 1:3279310/1‑150 (MQ=255) aaCCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGcccc > 1:3744276/1‑150 (MQ=255) aaCCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATAAAAGGGGCGCCAAGCGcccc > 1:3931943/1‑150 (MQ=255) aCCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCTTGGCGCCCCt < 2:3760815/150‑1 (MQ=255) aCCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCt > 2:857405/1‑150 (MQ=255) ccGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTg < 2:5821497/150‑1 (MQ=255) cGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGc < 1:4982229/150‑1 (MQ=255) cGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGc < 1:3509075/150‑1 (MQ=255) gTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGcc > 1:6681451/1‑150 (MQ=255) gTTTGGCGAGTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAAGAGCCAGCACCGAGCGACTGCCTGATTGATCTGCAAATCCGGATGACCGACTCAGCCGCAGTGTGCGCAACCCGACCACTGAAAGGGGCGCTTGGCGCCCCtttc < 2:5983626/150‑4 (MQ=255) gATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATcaca > 2:344959/1‑150 (MQ=255) ccTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAg > 1:4554580/1‑150 (MQ=255) tAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGtt < 2:6212449/150‑1 (MQ=255) tAGCTTAGAGGGCCTCATCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCAGCAAATCCGGATGAACGACTCAGCCGCAGTCAGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGtt > 2:6807246/1‑150 (MQ=255) gCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTcc < 2:5897058/150‑1 (MQ=255) tttGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGc > 1:6291229/1‑150 (MQ=255) gAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCAt < 2:6010861/150‑1 (MQ=255) aGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATc > 1:6844325/1‑150 (MQ=255) aGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATc > 1:740854/1‑150 (MQ=255) gggCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCa < 1:5527317/150‑1 (MQ=255) ccTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGt > 1:2141232/1‑150 (MQ=255) tctTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCa > 2:2196708/1‑150 (MQ=255) ttCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACt > 2:5580310/1‑150 (MQ=255) tCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTg > 2:5438745/1‑150 (MQ=255) aCGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGcc > 1:4183887/1‑106 (MQ=255) aCGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGcc < 2:4183887/106‑1 (MQ=255) cGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGc < 1:140989/150‑1 (MQ=255) cGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGc < 2:5047498/150‑1 (MQ=255) gAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGcc > 2:950951/1‑150 (MQ=255) aaTAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGt > 2:3252139/1‑150 (MQ=255) aaTAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGt < 2:5794069/150‑1 (MQ=255) aGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGa > 1:4752200/1‑150 (MQ=255) gCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGAc < 2:6485341/150‑1 (MQ=255) cAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCt > 2:1731514/1‑150 (MQ=255) cAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCAACACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCt > 1:6621932/1‑150 (MQ=255) aGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCtt > 1:1671209/1‑150 (MQ=255) gCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTg < 1:88574/150‑1 (MQ=255) aaCGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGtc < 1:2887535/150‑1 (MQ=255) aaCGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGtc > 2:1940804/1‑150 (MQ=255) gAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGtcatc < 2:5268086/150‑1 (MQ=255) gAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGtcatc > 1:5406214/1‑150 (MQ=255) aGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGtcatca < 1:4028316/150‑1 (MQ=255) aCTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCa < 2:4047582/150‑1 (MQ=255) tGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAgc < 1:1493080/150‑1 (MQ=255) tGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCAGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAgc > 1:6118420/1‑150 (MQ=255) ccTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAgcgc > 2:166581/1‑150 (MQ=255) ccTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAgcgc > 1:4830483/1‑150 (MQ=255) gattgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCTTGGCGCCCCtttca > 1:5239615/1‑79 (MQ=38) gattgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACt < 2:6339454/150‑1 (MQ=255) gattgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACt < 2:5305863/150‑1 (MQ=255) attgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTg > 2:6781192/1‑150 (MQ=255) atCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCt < 1:1234521/150‑1 (MQ=255) atCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCt < 1:2079576/150‑1 (MQ=255) tCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTg > 2:745338/1‑150 (MQ=255) acTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTg > 2:4623884/2‑150 (MQ=255) tGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCa > 2:6599913/1‑150 (MQ=255) tGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCa > 2:4282209/1‑150 (MQ=255) cAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCGTCATCCAGCGCACTGCCCTGCAGc > 1:2306243/1‑150 (MQ=255) cAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGc < 2:2756762/150‑1 (MQ=255) aaaTCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGcc > 2:5628523/1‑150 (MQ=255) aaTCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGccc < 2:4391000/150‑1 (MQ=255) aTCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGcccc < 2:4865853/150‑1 (MQ=255) tCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCt > 2:3614845/1‑150 (MQ=255) cGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGt < 1:6349168/150‑1 (MQ=255) ggATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTa > 1:4386950/1‑150 (MQ=255) gAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATa < 2:4544369/150‑1 (MQ=255) aaCGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCGCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATAc > 1:3126313/1‑150 (MQ=255) aaCGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATAc > 2:5469208/1‑150 (MQ=255) cGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTc < 1:4116969/150‑1 (MQ=255) aCTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCgg < 1:5656482/150‑1 (MQ=255) tCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGcc > 1:1110605/1‑150 (MQ=255) tCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGcc > 1:53430/1‑150 (MQ=255) aGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCaa > 1:6422566/1‑150 (MQ=255) aGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCaa > 2:1340800/1‑150 (MQ=255) gCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAAc < 1:4293142/150‑1 (MQ=255) gCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAAc < 1:3428023/150‑1 (MQ=255) ccGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACg < 1:2657189/150‑1 (MQ=255) cGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAg < 2:2889153/111‑1 (MQ=255) gcAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGtg > 2:4810435/1‑150 (MQ=255) gcAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGtg > 2:1109337/1‑150 (MQ=255) cccGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGtgctgc > 2:2470262/1‑150 (MQ=255) ccGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCa > 1:2872521/1‑150 (MQ=255) gACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACt > 2:1892817/1‑150 (MQ=255) gACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACt > 1:3917090/1‑150 (MQ=255) cAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCAGCCGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACAGACTCGGCCAACGCCTCGACCGTGCTGGGCTCGa > 2:2291409/1‑150 (MQ=255) tGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACa > 2:123369/1‑150 (MQ=255) gAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACAt > 2:3355741/1‑150 (MQ=255) gaaGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATc > 1:1591929/2‑150 (MQ=255) caGGGGCGCTTGGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCg > 1:5917460/2‑150 (MQ=255) aaGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACATTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCg > 1:2492820/1‑150 (MQ=255) ggggCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGcc > 1:265181/1‑150 (MQ=255) cgcCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCa < 2:2391072/150‑1 (MQ=255) gcCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCAg > 1:2776009/1‑150 (MQ=255) cAAGCGCCCCTGCCCATCACAGCCCCTCCAGGTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCAGCg < 1:5168162/150‑1 (MQ=255) | TTCTAAGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCAGCG > NC_002947/4823065‑4823363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |