| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,104,614 | A→C | 6.8% | intergenic (‑226/‑43) | acsA‑I ← / → PP_4488 | acetyl‑CoA synthetase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,104,614 | 0 | A | C | 6.8% | 967.7 / 2.9 | 347 | intergenic (‑226/‑43) | acsA‑I/PP_4488 | acetyl‑CoA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (165/141); new base C (3/32); total (168/179) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.22e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 361 total aligned reads displayed.
ACCCACTGTTTCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAACAGTACAGTTACTCGCA > NC_002947/5104465‑5104763 | acCCACTGTTTCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATaa > 1:962897/1‑150 (MQ=255)acCCACTGTTTCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATaa < 2:6073909/150‑1 (MQ=255) cccACTGTTTCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAg < 1:1412743/150‑1 (MQ=255) ccACTGTTTCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAgc > 1:6330695/1‑150 (MQ=255) ccACTGTTTCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAgc < 1:2703765/150‑1 (MQ=255) aCTGTTTCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAgcgc > 1:1492987/1‑150 (MQ=255) cTGTTTCGGACTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATTCTCGCGGCGCCATAAGcgcc < 1:87775/150‑1 (MQ=255) ttCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGt < 1:6441316/150‑1 (MQ=255) ttCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGt < 2:3341749/150‑1 (MQ=255) cTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGccccc > 2:4784280/1‑150 (MQ=255) cTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGccccc > 1:2294190/1‑150 (MQ=255) cTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGccccc > 1:5761089/1‑150 (MQ=255) cAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGa > 1:5977303/1‑150 (MQ=255) cAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGa > 1:5505396/1‑150 (MQ=255) aGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCCCGAc < 2:492052/150‑1 (MQ=255) gcgcCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGAcc < 2:2251043/150‑1 (MQ=255) ccATAAAATTCACCCCGCCAGCACCGGCATGGCTATTAACAACTGGTAACAGCCCCCACGACGGCACGGGTTAATCTCCATATAATCCCTATAGTTAAAACTCGCAATACTCGCGGCGCCATACGCGCCGCGTGCCCCCTCACGACCTTa < 1:397752/150‑1 (MQ=255) acATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTa > 2:4980111/2‑150 (MQ=255) aTAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGa < 2:2569883/150‑1 (MQ=255) aTAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGa > 2:3739762/1‑150 (MQ=255) aTAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGa > 1:1174482/1‑150 (MQ=255) tAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGAc > 1:6607835/1‑150 (MQ=255) tAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACATTAGAc > 1:2996059/1‑150 (MQ=255) tAAAATTCACCTCGCCAGCAACGGAATGGCGTTTAAAAACGGGTAACAGCCCCCACGACGCCACGCTTTAATCTCAATCTAATCCCGATTGTTAAAACTAGCAATACGCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGAc < 2:605138/150‑1 (MQ=255) aaaaTTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACa > 2:2480162/1‑150 (MQ=255) aaaaTTCACCTCGCCAGAAACGGAATGGCTATTAACAACTGGTAACAGCCCCCACGAAGGCATGCTTTAATCTCCATCTAATCCCTATATTTAAAACTAGCAATACTCGCGGCGCCATACGCGCCGCGTGCCCCCTCACGACCTTAGACa < 1:496931/150‑1 (MQ=255) aaaTTCACCTCGCCAGCAACGGCAAGGCTATTAACAACTGGTAACAGCCCCCACTAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAg < 2:4836774/150‑1 (MQ=255) aaaTTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAg > 2:4430328/1‑150 (MQ=255) aTTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGt > 1:453940/1‑150 (MQ=255) aTTCACCTCGCCACCAACGGAAAGGCGATAAACAACTGGTAACAGCCCCCACCAAGGAAAGCTTTAATCTCCATATAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGt < 2:4032067/150‑1 (MQ=255) ttCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTa > 1:4264259/1‑150 (MQ=255) aCCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAAt < 2:1891060/150‑1 (MQ=255) tCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGa > 2:4302442/1‑150 (MQ=255) tCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGa > 1:1859406/1‑150 (MQ=255) gCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGaca > 1:1981900/1‑148 (MQ=255) ccAGCAACGGCAAGGCTATTAACAACTGTTAACAGCCCCCACGAAGGAAAGCTTTAATCTCAATCTAATCCCGATATTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGaaaa < 1:3322224/150‑1 (MQ=255) ccAGCAACGGAATGGCTATTAAAAAGTGTTAACAGCCCCCACTATGGCAAGGTTTAATATCATTCTAATCCCTTTATTTAAAACTAGAATTACTGGCGGCGCAATACGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGaaaa < 1:2930944/150‑1 (MQ=255) aaCGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGaaa < 2:2051472/150‑1 (MQ=255) aaCGGAAAGGCGATTAACAACTGTTAACAGCCCCCACGATGGAAAGCGTTAATCTCAATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGaaa < 2:3238013/150‑1 (MQ=255) gCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCtt < 2:3930407/150‑1 (MQ=255) gCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCACCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTg < 1:6836120/150‑1 (MQ=255) aTTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTa > 1:6144523/1‑150 (MQ=255) aTTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCAACTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTa > 2:1056285/1‑150 (MQ=255) tAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATACGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTAtt > 1:4587634/1‑150 (MQ=255) aacaacTGGTATCAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTg < 2:5373326/150‑1 (MQ=255) acaacTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCACTACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACGGGTATTgg < 2:6364122/150‑1 (MQ=255) aacTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTa > 2:2287200/1‑150 (MQ=255) aacTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTa > 2:1604430/1‑150 (MQ=255) acTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGACATAAGCGCAGCGTGCCCCCTCACGACCGTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTAc > 2:769082/1‑150 (MQ=255) tGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACtt < 2:835785/150‑1 (MQ=255) tGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACtt < 2:70586/150‑1 (MQ=255) taaaccccccccACGAAGTAAATGTTTAATCTCATTTTAATCCCTATATTTAACACTCGAAATACTCGGGGCGACATACCCGCGGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTgg < 1:18021/143‑1 (MQ=255) gTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTgg < 1:4879034/150‑1 (MQ=255) accAGCCCCCCCGACGGCAAGCTTTAATCTCCATCTAATCCCGATATTTAAAACTAGCAATACGCGCGGCGCCATACGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCa < 1:695860/148‑1 (MQ=255) aaCAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCAGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCa < 2:5699224/150‑1 (MQ=255) aCAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAg < 2:4204297/150‑1 (MQ=255) aCAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAg > 2:4608600/1‑150 (MQ=255) aCAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAg > 1:405078/1‑150 (MQ=255) aGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTa > 1:4470073/1‑140 (MQ=255) ccccACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCttt > 2:4231866/1‑150 (MQ=255) ccccACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCttt > 2:6304244/1‑150 (MQ=255) cccACTAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTg < 2:468722/150‑1 (MQ=255) cccACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTg > 1:5666429/1‑150 (MQ=255) ccACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTgc < 2:2160807/150‑1 (MQ=255) ccACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTgc > 1:811390/1‑150 (MQ=255) aaGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCaa > 2:5895337/1‑150 (MQ=255) aaGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCaa > 1:3171754/1‑150 (MQ=255) aaGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCaa > 1:1051367/1‑150 (MQ=255) tAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCg < 2:5029036/150‑1 (MQ=255) cATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGc > 1:5928557/1‑150 (MQ=255) cTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGACGCCaa > 1:5807936/1‑150 (MQ=255) cTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCaa > 1:528959/1‑150 (MQ=255) tAATCCCTATATTTAAAACTAGCAATCCTCGCGGCGCCATACGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCaaa < 2:13842/150‑1 (MQ=255) aTCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGa > 2:5248140/1‑150 (MQ=255) tCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGAt > 2:6473176/1‑150 (MQ=255) cccGATAGTTAAAACTAGCAATACTCGCGGCGCCATACGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATg < 1:5046241/150‑1 (MQ=255) ccGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGc > 2:1130286/1‑150 (MQ=255) cGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGcc > 1:3688414/1‑150 (MQ=255) aTAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGa < 1:4784280/150‑1 (MQ=255) aGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGc < 2:5181265/150‑1 (MQ=255) aGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGc < 2:2694242/150‑1 (MQ=255) aCTAGAAATCCTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTcc < 1:1898264/150‑1 (MQ=255) cTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCg < 1:5139556/150‑1 (MQ=255) tAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCgg < 2:6607835/150‑1 (MQ=255) gCAATCCTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGtt < 2:3577252/150‑1 (MQ=255) caaaTACTCGCGGCGCAATATGGGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTTTTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGtt < 1:5468494/148‑1 (MQ=255) aaTACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGa > 2:2631000/1‑150 (MQ=255) aTACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGaa < 1:2196066/150‑1 (MQ=255) tCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAacagt > 1:2319396/1‑150 (MQ=255) cgcgGCGCCATACCCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAACTGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAacagta < 1:4661753/150‑1 (MQ=255) cgcgGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAacagta < 2:3458414/150‑1 (MQ=255) gggcgCCATACGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAacagtaca < 1:2413760/149‑1 (MQ=255) cggcgCCATCAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAacagtaca < 2:4651228/150‑1 (MQ=255) cggcgCCATACGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAACGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAacagtaca < 2:3064884/150‑1 (MQ=255) cggcgCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAACTGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAacagtaca < 2:6673320/150‑1 (MQ=255) cggcgCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAacagtaca < 1:1261948/150‑1 (MQ=255) aTAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGGATTGGTACTTGGCAGTCGTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAACAGTACAGTTACTc > 2:4552766/1‑150 (MQ=255) taGCGCCGCGTTCCCCCTCTCGACCTTAGACATGTAAATAGAATATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAACAGTACAGTTACTCgc < 2:1262680/149‑1 (MQ=255) aaGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAACAGTACAGTTACTCgc < 1:2578539/150‑1 (MQ=255) aaGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAACAGTACAGTTACTCgc < 2:6540617/150‑1 (MQ=255) | ACCCACTGTTTCGGCCTTGGCCAGCGCCATAAAATTCACCTCGCCAGCAACGGCAAGGCGATTAACAACTGGTAACAGCCCCCACGAAGGCAAGCGTTAATCTCCATCTAATCCCGATAGTTAAAACTAGCAATACTCGCGGCGCCATAAGCGCCGCGTGCCCCCTCACGACCTTAGACAGGTAAATAGAAAATGAAAGCTTTACTGGTATTGGTACTTGGCAGTCTTTGCGGCGCGGCAATGGCCGGCGAAGCCAAAGATGCCGAGCAGATTCCGGTTGAACAGTACAGTTACTCGCA > NC_002947/5104465‑5104763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |