Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,279,042 C→G 11.3% intergenic (+67/+39) rlmG → / ← PP_4649 ribosomal RNA large subunit methyltransferase G/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,279,0420CG11.3% 612.4 / 15.3 205intergenic (+67/+39)rlmG/PP_4649ribosomal RNA large subunit methyltransferase G/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (111/67);  new base G (2/25);  total (113/92)
Fisher's exact test for biased strand distribution p-value = 5.75e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 219 total aligned reads displayed.

ACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCT  >  NC_002947/5278893‑5279190
                                                                                                                                                       |                                                                                                                                                      
acaTCAAGGTGGCGGGGTTGTTCCGGGGGGTGTAGCAGGTGGCGTAAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAgcgc                                                                                                                                                        <  1:287444/150‑1 (MQ=39)
acaGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAgcgc                                                                                                                                                        >  2:2753452/1‑150 (MQ=255)
acaGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTAGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAgcgc                                                                                                                                                        <  2:4678649/150‑1 (MQ=255)
  aGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGt                                                                                                                                                      <  1:4621909/150‑1 (MQ=255)
  aGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGt                                                                                                                                                      >  1:2612966/1‑150 (MQ=255)
  aGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGt                                                                                                                                                      >  1:1662258/1‑150 (MQ=255)
  aGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCACGt                                                                                                                                                      >  1:6112083/1‑150 (MQ=255)
   gCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGtt                                                                                                                                                     <  2:1531870/150‑1 (MQ=255)
    cAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCGAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTg                                                                                                                                                    >  2:2884383/1‑150 (MQ=255)
    cAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTg                                                                                                                                                    >  1:3697292/1‑150 (MQ=255)
     aaGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGc                                                                                                                                                   <  2:3022791/150‑1 (MQ=255)
      atctgggcgatgagcgtcgcagcgctgggtgtggcggcctgtgtgatgcggctgttcatgggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCACGAAG‑CAGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCt                                                                                                                                                 >  1:2139045‑M1/99‑150 (MQ=255)
      aGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGcc                                                                                                                                                  <  2:6855489/150‑1 (MQ=255)
         tGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑c                                                                                                                                              <  2:6218571/150‑1 (MQ=255)
         tGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑c                                                                                                                                              >  2:5043097/1‑150 (MQ=255)
           gcgcGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑Ctt                                                                                                                                            >  1:3408962/1‑150 (MQ=255)
             gcgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCg                                                                                                                                          >  2:2026195/1‑150 (MQ=255)
              cgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTgtgttcg                                                                                                                                          <  2:1692375/150‑7 (MQ=255)
               ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTg                                                                                                                                        <  1:3375083/150‑1 (MQ=255)
               ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTg                                                                                                                                        <  1:5054131/150‑1 (MQ=255)
               ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTg                                                                                                                                        <  1:6393849/150‑1 (MQ=255)
               ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTg                                                                                                                                        >  2:6502402/1‑150 (MQ=255)
               atgagcgtcgcagcgctgggtgtggcggcctgtgtgatgcggctgttcatgggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTg                                                                                                                                        >  1:3178147‑M1/90‑150 (MQ=255)
               atgagcgtcgcagcgctgggtgtggcggcctgtgtgatgcggctgttcatgggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTg                                                                                                                                        >  1:40327‑M1/90‑150 (MQ=255)
                tgagcgtcgcagcgctgggtgtggcggcctgtgtgatgcggctgttcatgggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTgg                                                                                                                                       >  1:3039239‑M1/89‑150 (MQ=255)
                gttgttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTgg                                                                                                                                       <  1:5901820/150‑1 (MQ=255)
                gttgttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTgg                                                                                                                                       <  1:1313868/150‑1 (MQ=255)
                   gttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCa                                                                                                                                    >  1:5254745/1‑150 (MQ=255)
                        ggggggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑Gccc                                                                                                                              <  1:1116772/150‑1 (MQ=255)
                           gggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCt                                                                                                                           <  1:999567/150‑1 (MQ=255)
                              tGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGcc                                                                                                                        >  2:2124264/1‑150 (MQ=255)
                                    aGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCtt                                                                                                                  >  1:4141516/1‑150 (MQ=255)
                                       tGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTAt                                                                                                               >  1:2476700/1‑150 (MQ=255)
                                        ggcggcAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATc                                                                                                              >  2:3957921/1‑150 (MQ=255)
                                         gcggcACCGCCCATGGTGGTCTTTCTGAACGCCCGAATGTCGGCGCGCCACCGCCCCGGTAGGTGGGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GGGCCATCAAGCGGGTTGCCTG‑CTTGGTGGGCAA‑GCCCGCTGCCGCTCTTTATCa                                                                                                             <  2:6077970/150‑1 (MQ=255)
                                         gcgcaaaCGCCCACTTTGGTATTTCTCAAAGCCCGATCTTTGGCGCGCCACCCCCCCGGTTGGTGGGGGCTGCCCCGCTAACCCGGGCAC‑GGCCT‑GGCCCATCTCGCGGGTGGCGTG‑CTGCGGGGGAAC‑GCCCGCTGCCGCTCTTTATCa                                                                                                             <  2:3107004/145‑1 (MQ=255)
                                           ggcACCGCCCTTGTGCGTCTTTCGGAAAGCCCGCAAGTTGGCGCGCCACCGCCCCCGTCGGTGGGGGTTTGCCCGCTAAAACCGGAAC‑CGCCT‑GTGCAATATAGCGCTTGGCGTG‑CTTCTTGGGCAA‑GCCCGCTGCCGCTCTTTATCAgt                                                                                                           <  2:3788833/150‑1 (MQ=255)
                                           ggaaaCGCCCACGTTCTTCATTCTCAAAGCCCGCATGTCGGCGCGCCACCGCCCCCTTAGGCGCGGGCTGGCCCGCCAACACCGCCAA‑CGCCT‑GTGCCATCTAGCGGGTTGCCTG‑CTT‑GGGGGCAACGCCCGCTGCCGCTCTTTATCAgt                                                                                                           <  2:3788625/147‑1 (MQ=255)
                                            gcAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAgtg                                                                                                          >  1:2055140/1‑150 (MQ=255)
                                                   ccATGTTCTTCATTCTGAAAGCCCGCACGTAGGCGCGCCACCGCCCCGGTCGGTGCGGGCTTGCCCGCGAACACCGGCAC‑CGCCT‑GTGCCATCTCGCGGGTTGCGTG‑GTTGGTGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTc                                                                                                   <  2:3191076/150‑1 (MQ=255)
                                                   ccAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTc                                                                                                   >  1:1676919/1‑150 (MQ=255)
                                                   ccAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTc                                                                                                   >  2:6395256/1‑150 (MQ=255)
                                                    cAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTGGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCAACTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCCCTGCCGCTCGTTATAAGTGTGTGGTCa                                                                                                  >  1:1758138/1‑150 (MQ=38)
                                                     aaGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAg                                                                                                 >  1:2826473/1‑150 (MQ=255)
                                                     aaGTTCGTATTTCTGAAAGCCCGCACGTCGGCGCGCCACCGCCCCCGTAGGAGGGGGCTGGCCCGCTAACACCGGCAC‑CGCTT‑GTGCCATCTCGGGGGTTGCCTG‑CTGGGGGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAg                                                                                                 <  2:2959408/150‑1 (MQ=255)
                                                     aaGTGCGTCTTTCTGAACGCCCGCACGTCGGCGCGCCCCCGCCCCCGTCGGCGCGGGGTGGCCCGCGACCACCGGCAA‑CGCCT‑GTGCCATCTCGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAg                                                                                                 <  2:6728176/150‑1 (MQ=255)
                                                      tgTTCGTCATTCTGAAAGCCCGCATGTCGGGGCGCCACCGCCCCCGTAGGAGGGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCAATCTCGCGGGTTGCCTG‑ATTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAgg                                                                                                <  2:5482342/149‑1 (MQ=255)
                                                         tCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGccc                                                                                             >  2:4890628/1‑150 (MQ=255)
                                                           gTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCCGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCccgc                                                                                           >  1:1199784/1‑150 (MQ=255)
                                                             cATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCccgccg                                                                                         >  1:6584391/1‑150 (MQ=255)
                                                               ttCTGAACGCCCGCACGTCGGCGCGCCACCGCCCCCTTTGGTGGGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTCGCGGGTTGCCTG‑CTTGGTGGGCAT‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCgccgcc                                                                                       <  2:1876970/150‑1 (MQ=255)
                                                                tCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCAGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccc                                                                                      >  2:1154450/1‑150 (MQ=255)
                                                                  tGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccccc                                                                                    >  1:5010673/1‑150 (MQ=255)
                                                                   gAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCa                                                                                   >  1:93701/1‑150 (MQ=255)
                                                                    aacgCCCGCACGGCGGCCCCCCCCCCCCCCGGTGGGGGGGGGCTGCCCCGCCAACCCCGCCAA‑CGCGT‑GTGCCATCGCGCGCGGTGCCTT‑CTTGGTGGCCAC‑CCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCAt                                                                                  <  1:6302467/147‑1 (MQ=255)
                                                                         ccGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGc                                                                                                                                                   >  1:3322652/1‑82 (MQ=255)
                                                                           gCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCG‑GTGCCAACTAGCGCGGTGCCTG‑CTTCGTGGGCAA‑GCCCGCGGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCAGGAACAGc                                                                           >  1:3101692/1‑150 (MQ=38)
                                                                                tAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCAt                                                                      >  2:75699/1‑150 (MQ=255)
                                                                                tAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCAt                                                                      >  2:3488461/1‑150 (MQ=255)
                                                                                   gcgcgcCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATcac                                                                   >  2:4072142/1‑150 (MQ=255)
                                                                                   gcgcgcCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATcac                                                                   >  2:6852788/1‑150 (MQ=255)
                                                                                     gcgcCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCAGCTAGCGCGTTGCCTG‑CGGCGTGGGCAA‑GCCCGCTGCCGCTCGGGATCAGTGTGTGGTCAGGCCCGCCGCCCCCCTGAACCGCCGCATcacac                                                                 >  2:5173257/1‑150 (MQ=38)
                                                                                         ccccGCCCCGTTCGGTGGGGGTTTCCCCGCTAACA‑CGGCAACCGCGT‑GTGCCTTCTCGCGCGTTGCCTG‑TTTGGTGGGAAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGgc                                                             <  1:5545610/148‑1 (MQ=255)
                                                                                         cACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGgc                                                             >  1:6673715/1‑150 (MQ=255)
                                                                                              cccccGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCca                                                        >  2:2564133/1‑150 (MQ=255)
                                                                                                 ccGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCacac                                                     >  2:2330696/1‑150 (MQ=255)
                                                                                                   gTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACAccc                                                   >  1:6700554/1‑150 (MQ=255)
                                                                                                          gGGGCTGGCCCGCTAACACCGGAAA‑CGCCT‑GTGCAATCTCGCGCTTTGCCTG‑CTTCGTGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTg                                            >  2:5837226‑M1/2‑150 (MQ=255)
                                                                                                           gggTTTGCCCGTGAACAGGGGCAT‑CGCCT‑GTGCATTGTTGCGGTTTGCCTG‑GTTGGTGGGCTT‑GCCGGCTGCCTCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCGCATGATCAGCCGCATCACACAGGCCGCCTCACCCAGCGCTGc                                           <  2:6469439/150‑1 (MQ=255)
                                                                                                           GGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGc                                           <  1:6597540‑M1/150‑1 (MQ=255)
                                                                                                             GCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGa                                         <  1:4542933‑M1/150‑1 (MQ=255)
                                                                                                             GCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGa                                         <  1:4291901‑M1/150‑1 (MQ=255)
                                                                                                             GCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGa                                         <  1:5003407‑M1/150‑1 (MQ=255)
                                                                                                                  CCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTc                                    <  2:6636319‑M1/150‑1 (MQ=255)
                                                                                                                   CCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCa                                   <  1:1955883‑M1/150‑1 (MQ=255)
                                                                                                                        cacccccgCAA‑CGGCTGGTGCAATCTCGCGGGTTGCCTG‑GTTGGTGGCAAC‑CCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGc                               <  1:968673/143‑1 (MQ=255)
                                                                                                                        aaCACGGGAAA‑CGCCT‑GTGCAATCTCGCGGGTTGCCTG‑ATTCGTGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGcc                              <  2:6537877/150‑1 (MQ=255)
                                                                                                                          cacCGGCAC‑CGCCT‑GTGCCATCTAGGGGGTTGCCTG‑CTTGGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCa                            <  2:3697292/150‑1 (MQ=255)
                                                                                                                          cacCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTGTGTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGccc                             >  1:1295947/1‑150 (MQ=255)
                                                                                                                           acCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAg                           >  2:845099/1‑150 (MQ=255)
                                                                                                                             cgccAA‑CGCTT‑TTCCAATCTTGCGCTTTGCTTG‑CTTGGTGGGAAC‑CCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGAt                         <  1:1581009/147‑1 (MQ=255)
                                                                                                                             cGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGAt                         >  1:4238891/1‑150 (MQ=255)
                                                                                                                             cGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGAt                         >  2:5641273/1‑150 (MQ=255)
                                                                                                                               gCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCa                       >  2:3367351/1‑150 (MQ=255)
                                                                                                                                cAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAg                      >  2:1768327/1‑150 (MQ=255)
                                                                                                                                 caccGCCT‑GTGCCATCTCGCGGGTGGCCTG‑GTGGGTGGGAAC‑CCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAg                      <  1:750407/147‑1 (MQ=255)
                                                                                                                                 aa‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGc                     <  2:4532692/150‑1 (MQ=255)
                                                                                                                                     gCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAAc                  >  2:3268395/1‑150 (MQ=255)
                                                                                                                                      cgt‑gtgCCATCTCGCGGGTTGCGTG‑CTTGGTGGGAAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACa                 <  1:912098/148‑1 (MQ=255)
                                                                                                                                      ccT‑GGGCCTTCTAGGGCGTTGCCTG‑CTTTTTGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACa                 <  1:2753452/150‑1 (MQ=255)
                                                                                                                                               aTCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCaa            >  2:6682637/1‑147 (MQ=255)
                                                                                                                                               aTCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAAccc         >  1:6509444/1‑150 (MQ=255)
                                                                                                                                                  tAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGt      >  1:1233588/1‑150 (MQ=255)
                                                                                                                                                  tAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGt      >  2:2261316/1‑150 (MQ=255)
                                                                                                                                                    gcgcGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCg    >  2:2973818/1‑150 (MQ=255)
                                                                                                                                                      gcgTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCt  <  1:4444352/150‑1 (MQ=255)
                                                                                                                                                      gcgTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCt  >  1:297864/1‑150 (MQ=255)
                                                                                                                                                      gcgTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCt  <  1:4832405/150‑1 (MQ=255)
                                                                                                                                                      gcgTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCt  <  1:1002121/150‑1 (MQ=255)
                                                                                                                                                      gcgTTGCCTG‑CTCCGTGGGCAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCt  <  2:1970119/150‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                      
ACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCT‑GTGCCATCTAGCGCGTTGCCTG‑CTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCT  >  NC_002947/5278893‑5279190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑