| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,321,049 | C→T | 6.7% | intergenic (‑120/+31) | PP_4677 ← / ← ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,321,049 | 0 | C | T | 6.7% | 1151.4 / 46.7 | 370 | intergenic (‑120/+31) | PP_4677/ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base C (200/145); new base T (16/9); total (216/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 378 total aligned reads displayed.
CTTGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCG > NC_002947/5320900‑5321198 | ttGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCg > 2:351062/1‑150 (MQ=255) gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa > 1:2107237/1‑150 (MQ=255) ttCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAg < 1:6543652/150‑1 (MQ=255) cGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGcc > 2:2422704/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑t > 1:717036/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑t > 1:6360684/1‑150 (MQ=255) ctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCG‑tt < 2:2199297/150‑1 (MQ=255) tCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑tttt < 1:1860446/150‑1 (MQ=255) tCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑tttt > 2:4908429/1‑150 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTc > 1:4077536/1‑150 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTc > 1:4836942/1‑150 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTc < 1:569686/150‑1 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTc > 1:6704191/1‑150 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TGTTTc > 2:3603407/1‑150 (MQ=255) ggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCa < 2:536191/150‑1 (MQ=255) gACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCAt > 1:1668934/1‑150 (MQ=255) gTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCcg > 1:3300591/1‑137 (MQ=255) gTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCtt > 1:119931/1‑150 (MQ=255) tCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTc < 2:4653551/150‑1 (MQ=255) gCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGa > 1:2528102/1‑150 (MQ=255) tCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATa > 1:3953878/1‑150 (MQ=255) cATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATaa < 1:2960233/150‑1 (MQ=255) tACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGtt > 2:2044149/1‑150 (MQ=255) tACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGtt < 1:3098906/150‑1 (MQ=255) aaCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCt > 1:104208/1‑150 (MQ=255) aaCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCt > 1:4372871/1‑150 (MQ=255) aaCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACGTAGTTCTTGGTCt > 1:5065745/1‑150 (MQ=255) aCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCtt < 2:6496523/150‑1 (MQ=255) aGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGt < 1:4419543/150‑1 (MQ=255) ggAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcgacg > 2:4363774/1‑150 (MQ=255) ggAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcgacg > 2:2578658/1‑150 (MQ=255) gAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcgacga > 1:4187624/1‑150 (MQ=255) ttCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGtt < 1:4790809/150‑1 (MQ=255) gACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGc < 2:1182878/150‑1 (MQ=255) acacGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGcc < 2:3363330/150‑1 (MQ=255) acacGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGcc < 2:278909/150‑1 (MQ=255) cacGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCg < 2:2527419/150‑1 (MQ=255) acGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCga < 2:1415844/150‑1 (MQ=255) acGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCga < 1:2676844/150‑1 (MQ=255) acGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCga < 2:3128451/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 1:5212416/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 2:3785476/150‑1 (MQ=255) cctcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCGTGTCGACGATTTTGGTAGCCGAGATCCa > 1:3203421/4‑150 (MQ=255) gcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACg > 1:2264492/1‑150 (MQ=255) aCAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGcatc < 2:3298892/150‑1 (MQ=255) ttCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGa < 2:4445991/150‑1 (MQ=255) aCAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCa < 1:3892362/150‑1 (MQ=255) aCAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCGTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCa > 1:3809977/1‑150 (MQ=255) aGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgc > 2:3672805/1‑150 (MQ=255) aGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgctgct > 1:1616458/1‑150 (MQ=255) gCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTc > 1:5404350/1‑150 (MQ=255) ccACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCg > 1:6423480/1‑150 (MQ=255) aCTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGcc > 2:5022273/1‑150 (MQ=255) aCTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGcc < 2:858885/150‑1 (MQ=255) cTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCg < 1:1755436/150‑1 (MQ=255) tGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCga > 2:1458348/1‑150 (MQ=255) gtgtGCTTTATAACATAAGGTGGATGCAAGAAGTAAAAAACGCGGCCGTAGCCTCG‑TTTTTCTTCTTTCGATATGACTTAGTTCTTGTTCTTGTCTTCGATTTTGTTAGCGGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatg < 1:1491589/147‑1 (MQ=255) gTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatg > 2:2103898/1‑150 (MQ=255) cTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatgat > 1:6032305/1‑150 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtc > 1:1376000/1‑150 (MQ=255) cTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtctc > 2:5148759/1‑150 (MQ=255) tttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCg > 2:2922859/1‑150 (MQ=255) tttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTCCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCg > 2:5240728/1‑150 (MQ=255) ttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGa > 2:4185940/1‑150 (MQ=255) tataCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGAt < 2:568329/150‑1 (MQ=255) tataCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGAt > 1:4327279/1‑150 (MQ=255) tataCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGAt > 2:6687007/1‑150 (MQ=255) ataCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATg > 2:28866/1‑150 (MQ=255) ataCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATg < 2:3484072/150‑1 (MQ=255) taCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGc > 2:4546548/1‑150 (MQ=255) ccAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCg > 2:3009254/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 2:61171/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 1:5571739/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 2:160312/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 2:1257316/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCAACTTTCGATAAGACGTAGTTCTTGGTCTTGTCGACGATGTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 1:6657642/1‑150 (MQ=255) aGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGGCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTg > 1:5188479/1‑150 (MQ=255) gAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGcat < 1:4487077/110‑1 (MQ=255) aGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGcc < 1:6145460/94‑1 (MQ=255) aTGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgtt < 1:2896815/150‑1 (MQ=255) cAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGttgttg < 1:2422704/150‑1 (MQ=255) cAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGttgttg > 1:6256229/1‑150 (MQ=255) aGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgc < 2:2369753/150‑1 (MQ=255) gatgaaaaaCGCGGCTTCGGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgcggc > 2:6346697/5‑150 (MQ=255) aCGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTc < 2:6293705/53‑1 (MQ=255) cGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgcggcg > 1:4749556/1‑150 (MQ=255) tgaaaaaCGCGGCTTCGGCCGCGTTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgcggcg > 1:4923061/3‑150 (MQ=255) aaaaaCGCGGCTTCGGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 2:5339020/1‑150 (MQ=255) aaaaaCGCGGCTTCGGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 2:1061577/1‑150 (MQ=255) aaaaaCGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt < 1:3288434/150‑1 (MQ=255) aaaaaCGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 1:5824416/1‑150 (MQ=255) aaaaaCGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGAGTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 2:1874300/1‑150 (MQ=255) aaaCGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg < 2:3953878/150‑1 (MQ=255) aaaCGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg < 1:4613061/150‑1 (MQ=255) aCGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCg < 2:1729998/150‑1 (MQ=255) gcgGCCGAAGCCGCG‑TTTTTCATCTTTCCATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCATGGCGGt > 2:610429/1‑150 (MQ=255) cgGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTc < 1:1137344/150‑1 (MQ=255) ggCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCa > 2:19367/1‑150 (MQ=255) ccGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATc > 1:3393670/1‑150 (MQ=255) cGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCg < 2:4501873/150‑1 (MQ=255) | CTTGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCG‑TTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCG > NC_002947/5320900‑5321198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |