| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,321,051 | A→C | 6.7% | intergenic (‑122/+29) | PP_4677 ← / ← ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,321,051 | 0 | A | C | 6.7% | 1235.1 / 57.1 | 371 | intergenic (‑122/+29) | PP_4677/ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base A (199/145); new base C (16/9); total (216/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01 | |||||||||||
Only 100 of 385 total aligned reads displayed.
GTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAT > NC_002947/5320903‑5321200 | gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa < 2:544736/150‑1 (MQ=255)gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa > 1:2107237/1‑150 (MQ=255) ttCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAg < 2:1213204/150‑1 (MQ=255) cGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGcc > 1:3670759/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGt > 2:3285027/1‑150 (MQ=255) ctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGtt < 1:5557453/150‑1 (MQ=255) ttCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGttt > 1:5612383/1‑150 (MQ=255) ttCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGttt > 2:299791/1‑150 (MQ=255) tCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGtttt > 2:4908429/1‑150 (MQ=255) tCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGtttt < 2:2240624/150‑1 (MQ=255) tCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGtttt < 1:1860446/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGttttt < 2:2571474/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGttttt < 1:2322858/150‑1 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTc > 1:4077536/1‑150 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTGTTTc > 2:3603407/1‑150 (MQ=255) gACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCAt < 2:1630680/150‑1 (MQ=255) cGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCt < 2:6630727/150‑1 (MQ=255) gTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCtt > 1:119931/1‑150 (MQ=255) ttCGCTCATGGAGGGTACCTTGCAACAGTATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACTCGGCCGAAGCCGCGTTTTTCATCttt < 1:3850310/150‑1 (MQ=255) tCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTc < 2:1532115/150‑1 (MQ=255) tCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTc < 2:4653551/150‑1 (MQ=255) gCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGa < 2:3785657/150‑1 (MQ=255) gCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGa > 1:2528102/1‑150 (MQ=255) tCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATa > 1:3953878/1‑150 (MQ=255) cATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATaa < 1:5277760/150‑1 (MQ=255) cATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATaa < 2:1037845/150‑1 (MQ=255) ggAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGAc > 2:1166861/1‑150 (MQ=255) tACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGtt > 2:3124862/1‑150 (MQ=255) cTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCtt > 2:3993963/1‑150 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACTGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 1:3347982/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg > 2:584957/1‑150 (MQ=255) cAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTc < 1:4964043/150‑1 (MQ=255) aaCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCt > 1:104208/1‑150 (MQ=255) aCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCtt < 1:3294743/150‑1 (MQ=255) cAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTg < 1:6496935/150‑1 (MQ=255) gAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcgacga > 1:4187624/1‑150 (MQ=255) tCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTa > 1:6575463/1‑150 (MQ=255) gACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGc < 2:2081029/150‑1 (MQ=255) acacGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGcc < 2:3363330/150‑1 (MQ=255) cacGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCg < 1:3087973/150‑1 (MQ=255) acGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCga < 1:2676844/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 1:5212272/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 1:6680311/150‑1 (MQ=255) ggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGGTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGAt > 1:6164210/1‑150 (MQ=255) cgcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCAc > 1:4342978/1‑150 (MQ=255) aaaCAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGca < 2:2008605/150‑1 (MQ=255) ttCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGa < 2:4445991/150‑1 (MQ=255) cTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAgc < 1:5793296/150‑1 (MQ=255) aCAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCa < 1:4518720/150‑1 (MQ=255) cAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCggcgagca < 1:1694378/150‑8 (MQ=255) aGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgc < 1:4757429/150‑1 (MQ=255) aGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgc < 1:4674947/150‑1 (MQ=255) aGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgc > 1:6395928/1‑150 (MQ=255) aGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgc > 2:3672805/1‑150 (MQ=255) cGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 2:179100/97‑1 (MQ=255) aCTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGcc > 2:5022273/1‑150 (MQ=255) aCTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGcc < 2:858885/150‑1 (MQ=255) cTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCg < 1:1755436/150‑1 (MQ=255) tGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCga > 2:6410212/1‑150 (MQ=255) gtgtGCTTTATAACATAAGGTGGATGCAAGAAGTAAAAAACGCGGCCGTAGCCTCGTTTTTCTTCTTTCGATATGACTTAGTTCTTGTTCTTGTCTTCGATTTTGTTAGCGGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatg < 1:1491589/147‑1 (MQ=255) gTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatg < 1:5864333/150‑1 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtc > 1:1636111/1‑150 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtc > 1:1376000/1‑150 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtc < 2:2682327/150‑1 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGAGGAtc > 1:5103266/1‑150 (MQ=255) cTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtctc > 2:5148759/1‑150 (MQ=255) tttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCg > 2:2819665/1‑150 (MQ=255) tttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTCCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCg > 2:5240728/1‑150 (MQ=255) tagaCCAGCAGCTGGATGCCAGAACGAAACAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATACGACTTAGATCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCAACATCGAGCGCAGCTGCTCGCCGATGATCTCGAt < 2:1428403/147‑1 (MQ=255) taCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGc > 2:4546548/1‑150 (MQ=255) ccAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCg > 1:4847891/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 2:61171/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCAATGCCGt < 1:6304384/150‑1 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGAGTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 2:425017/1‑150 (MQ=255) tGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcggc > 2:2151536/1‑150 (MQ=255) aTGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgtt < 1:2896815/150‑1 (MQ=255) aGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgc > 2:135255/1‑150 (MQ=255) aGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgc > 1:3275604/1‑150 (MQ=255) gAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGAGTTGTTgcg > 1:4379675/1‑150 (MQ=255) aCGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTc < 2:6293705/53‑1 (MQ=255) tgaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:2413399/3‑150 (MQ=255) gAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:1879499/1‑150 (MQ=255) gAAAAAACGCGGCCGAAGCCGCGATTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATAGTGTTAGCCGAGATCCACGGCATCATCCAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:3503630/1‑150 (MQ=255) gaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGGTAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCt > 2:3460350/2‑150 (MQ=255) aaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGcc < 2:2509038/76‑1 (MQ=37) aaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 2:5339020/1‑150 (MQ=255) aaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 1:4807167/1‑150 (MQ=255) aaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg > 1:6767637/1‑150 (MQ=255) aaaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg > 2:2912201/1‑150 (MQ=255) aaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGc < 1:6108223/150‑1 (MQ=255) gcgGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGt > 2:610497/1‑150 (MQ=255) cgGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTc < 1:1137344/150‑1 (MQ=255) ccGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATc < 1:4305664/150‑1 (MQ=255) cGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCg < 2:4501873/150‑1 (MQ=255) gAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGa > 1:4462928/1‑150 (MQ=255) aaGCCTCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 2:6704191/150‑1 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 2:432371/150‑1 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 1:3124862/150‑1 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 1:2941370/150‑1 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 1:2427747/150‑1 (MQ=255) | GTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAT > NC_002947/5320903‑5321200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |