| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,321,052 | A→G | 6.7% | intergenic (‑123/+28) | PP_4677 ← / ← ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,321,052 | 0 | A | G | 6.7% | 1166.4 / 45.7 | 371 | intergenic (‑123/+28) | PP_4677/ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base A (200/146); new base G (16/9); total (216/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.04e-01 | |||||||||||
Only 100 of 388 total aligned reads displayed.
GTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGATG > NC_002947/5320903‑5321201 | gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa < 2:544736/150‑1 (MQ=255)gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa < 2:1623510/150‑1 (MQ=255)gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa > 1:2107237/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGt > 1:582891/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGt > 2:3284937/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGt > 2:2607481/1‑150 (MQ=255) ctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGtt > 2:4628128/1‑150 (MQ=255) tCGGGACGTTCGCTCATTGAGGGTACCTTGCAACTGGTTGGAAATTGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGtttt < 1:2899007/150‑1 (MQ=255) tCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGtttt < 2:2900787/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGttttt < 1:2322858/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGGTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGttttt < 1:4846216/150‑1 (MQ=255) cGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCt < 2:6630727/150‑1 (MQ=255) gTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCtt > 1:119931/1‑150 (MQ=255) tCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTc < 1:1909731/150‑1 (MQ=255) gCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGa > 1:2528102/1‑150 (MQ=255) tCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATa > 2:1137344/1‑150 (MQ=255) cATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATaa < 1:2960233/150‑1 (MQ=255) gAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACt > 1:4117170/1‑150 (MQ=255) gggTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTa > 1:4203405/1‑150 (MQ=255) ggTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAg > 1:4369582/1‑150 (MQ=255) tACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGtt < 1:3098906/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACTGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 1:3347982/150‑1 (MQ=255) aaCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCt > 1:104208/1‑150 (MQ=255) aCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCtt < 1:3294743/150‑1 (MQ=255) aCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCtt > 1:5583994/1‑150 (MQ=255) cAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTg < 1:6496935/150‑1 (MQ=255) aGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGt > 2:1785853/1‑150 (MQ=255) aGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGt < 1:4419543/150‑1 (MQ=255) tCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTa > 1:6575463/1‑150 (MQ=255) acGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCga > 2:3113446/1‑150 (MQ=255) acGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCga < 1:2676844/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 1:6680311/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 2:3785476/150‑1 (MQ=255) gCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATc > 2:1351458/1‑150 (MQ=255) gcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACg > 1:5528345/1‑150 (MQ=255) ttCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGa < 2:4445991/150‑1 (MQ=255) cTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAgc < 1:5793296/150‑1 (MQ=255) aCAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCa > 2:2199864/1‑150 (MQ=255) aCAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCa < 1:3892362/150‑1 (MQ=255) aCAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCGTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCa > 1:3809977/1‑150 (MQ=255) cAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCggcgagca < 1:1694378/150‑8 (MQ=255) aGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgc < 1:4757308/150‑1 (MQ=255) gCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgct < 2:4531595/150‑1 (MQ=255) cGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg > 1:179100/1‑97 (MQ=255) cACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGc > 2:2401263/1‑150 (MQ=255) aCTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGcc < 2:858885/150‑1 (MQ=255) aCTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGcc > 2:5022273/1‑150 (MQ=255) tGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCga > 2:6410212/1‑150 (MQ=255) gtgtGCTTTATAACATAAGGTGGATGCAAGAAGTAAAAAACGCGGCCGTAGCCTCGTTTTTCTTCTTTCGATATGACTTAGTTCTTGTTCTTGTCTTCGATTTTGTTAGCGGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatg < 1:1491589/147‑1 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtc > 1:1376000/1‑150 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtc > 1:1636111/1‑150 (MQ=255) cTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtctc > 2:5148759/1‑150 (MQ=255) tttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCg > 2:2434943/1‑150 (MQ=255) tttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTCCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCg > 2:5240728/1‑150 (MQ=255) ttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGa > 2:4185940/1‑150 (MQ=255) tataCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGAt < 2:568329/150‑1 (MQ=255) ataCCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATg > 1:4924842/1‑150 (MQ=255) ccAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCg < 1:5067169/150‑1 (MQ=255) ccAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCg > 1:6047656/1‑150 (MQ=255) ccAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTGGTTCATCTTTCGAAAAGACTGAGTTCGTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGCTGATCTCGATGCCg > 2:1186576/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGTAGCCGCGTTTGTCATCTTTCGATACGCGTTGGTGCTTGGTCTTGTCGACGATGGTGTTAGCCGAGATCCACGGCAGCGGCGAGCGCAGCTGCTCGCCGATGATGTCGGTGCCGt > 2:335262/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 2:61171/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt < 1:4510729/150‑1 (MQ=255) aGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTg > 2:4735688/1‑150 (MQ=255) gAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgctgc < 1:3994974/126‑1 (MQ=255) gAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGa < 1:6162002/150‑1 (MQ=255) gAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGa < 1:5191456/150‑1 (MQ=255) tGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcggc > 2:2545248/1‑150 (MQ=255) ggATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcggcg < 2:2107237/150‑1 (MQ=255) cAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGttgttg < 2:3670759/150‑1 (MQ=255) aGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgc < 1:5260178/150‑1 (MQ=255) aGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgc > 1:3275604/1‑150 (MQ=255) gAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgcg < 1:99031/150‑1 (MQ=255) aCGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTc < 2:6293705/53‑1 (MQ=255) aCGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTc > 1:6293705/1‑53 (MQ=255) atgaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgcggcg > 2:2075523/4‑150 (MQ=255) gAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACGTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:2968525/1‑150 (MQ=255) gAAAAAACGCGGCCGAAGCCGCGATTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATAGTGTTAGCCGAGATCCACGGCATCATCCAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:3503630/1‑150 (MQ=255) gaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGGTAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCt > 2:3460350/2‑150 (MQ=255) aaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 1:4806966/1‑150 (MQ=255) aaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 2:5339020/1‑150 (MQ=255) aaaaaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGAGTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 2:1874300/1‑150 (MQ=255) aaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg > 1:6767637/1‑150 (MQ=255) aaaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg < 2:3953878/150‑1 (MQ=255) aaaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg < 2:2817068/150‑1 (MQ=255) aCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCg < 1:6370321/150‑1 (MQ=255) gcgGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGt > 2:3593936/1‑150 (MQ=255) gcgGCCGAAGCCGCGTTTTTCATCTTTCCATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCATGGCGGt > 2:610429/1‑150 (MQ=255) cgGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTc < 1:1137344/150‑1 (MQ=255) cgGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTc < 1:4628128/150‑1 (MQ=255) ggCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCa > 2:19367/1‑150 (MQ=255) ccGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATc < 1:4305664/150‑1 (MQ=255) cGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCg > 2:1491174/1‑150 (MQ=255) cGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCg < 2:4501873/150‑1 (MQ=255) gAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGa > 1:4462928/1‑150 (MQ=255) aaGCCTCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 2:6704191/150‑1 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 2:1420703/150‑1 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 2:432371/150‑1 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 1:3124862/150‑1 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAt < 1:2427747/150‑1 (MQ=255) | GTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGATG > NC_002947/5320903‑5321201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |