| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,385,162 | A→G | 6.5% | intergenic (+76/+32) | recN → / ← fur | DNA repair/recombination protein/ferric iron uptake global transcriptional repressor Fur |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,385,162 | 0 | A | G | 6.5% | 1024.8 / 37.5 | 324 | intergenic (+76/+32) | recN/fur | DNA repair/recombination protein/ferric iron uptake global transcriptional repressor Fur |
| Reads supporting (aligned to +/- strand): ref base A (161/142); new base G (11/10); total (172/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01 | |||||||||||
Only 100 of 325 total aligned reads displayed.
TGCTCGGCGGGATCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGATGACTT > NC_002947/5385013‑5385309 | gCTCGGCGGGATCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAg > 2:540460/1‑150 (MQ=255) tCGGCGGGATCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGt > 1:897399/1‑150 (MQ=255) tCGGCGGGATCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGt > 2:1444156/1‑150 (MQ=255) cggGATCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGcc < 1:6755367/150‑1 (MQ=255) gggATCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGGTTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCTTCGGGTCGCCt < 1:3320146/150‑1 (MQ=255) gATCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCttt < 1:4935484/150‑1 (MQ=255) aTCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAATCACAAAGGCGACCCGAAGGTCGCCTTTg < 1:1619169/150‑1 (MQ=255) aTCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCTTCGGGTCGCCTTTg < 1:6307002/150‑1 (MQ=255) aTCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTg < 2:5794765/150‑1 (MQ=255) aTCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTg < 2:5168301/150‑1 (MQ=255) tCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGc < 1:2610963/150‑1 (MQ=255) tCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTGTAGCCCCAGAAAGCACAAAGGCGACCTTCGGGTCGCCTTTgt < 1:3586725/150‑2 (MQ=255) cGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCGCAAAGGCGACCTTCGGGTCGCCTTTgtg < 1:4918683/150‑3 (MQ=255) aCCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTAt > 1:5729845/1‑150 (MQ=255) ccTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATc < 1:2560103/150‑1 (MQ=255) ccTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATc > 1:3082482/1‑150 (MQ=255) tGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCa < 1:4167279/150‑1 (MQ=255) cAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAAc > 1:5719575/1‑150 (MQ=255) cAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAAc > 2:5570769/1‑150 (MQ=255) cAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAAc > 2:3620187/1‑150 (MQ=255) cAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAAc > 2:6001517/1‑150 (MQ=255) cAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTGTGCTATCCATAAc > 2:388920/1‑150 (MQ=255) aGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTAt < 1:2908869/141‑1 (MQ=255) aGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTAt > 2:2908869/1‑141 (MQ=255) cccTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGACAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAAcc < 1:2495560/150‑1 (MQ=255) ccTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGC‑TTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGt < 2:5663334/150‑1 (MQ=255) cTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGt > 1:3874009/1‑150 (MQ=255) cTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGt < 1:4066354/150‑1 (MQ=255) ggCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTa < 1:4577685/150‑1 (MQ=255) ggCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTa < 1:2398672/150‑1 (MQ=255) ggCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTa < 2:3268452/150‑1 (MQ=255) ccATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTActt < 2:6558486/150‑1 (MQ=255) aTGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGTAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTActtct < 1:4455931/150‑1 (MQ=255) tGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTActtctt < 2:3707828/150‑1 (MQ=255) gCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTActtcttc > 1:6161780/1‑150 (MQ=255) gCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTAc < 2:125921/150‑1 (MQ=255) gCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTAc < 2:6323835/150‑1 (MQ=255) aTGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACg < 1:946106/150‑1 (MQ=255) gtggtgAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACGCATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTAc > 2:1641437/1‑150 (MQ=255) tggtgAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACa > 1:5832078/1‑150 (MQ=255) tggtgAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACa > 1:2041263/1‑150 (MQ=255) ggtgAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAg < 2:2692488/150‑1 (MQ=255) tgAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCACAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGa > 1:4042620/1‑150 (MQ=255) gAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGAc < 2:2338866/150‑1 (MQ=255) gCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGAt > 2:1843334/1‑150 (MQ=255) gCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGAt > 2:4519535/1‑150 (MQ=255) gCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGAt > 1:6526923/1‑150 (MQ=255) ggCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATtgtg < 1:5226674/150‑1 (MQ=255) gCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACAGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTgg > 2:824827/1‑150 (MQ=255) cTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTc > 2:2219653/1‑150 (MQ=255) tGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTcc < 1:1856442/150‑1 (MQ=255) aGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTccac < 1:4758734/150‑1 (MQ=255) gCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTccacc < 1:5115705/150‑1 (MQ=255) cTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAg > 2:6743300/1‑150 (MQ=255) ttGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGc > 2:3986748/1‑150 (MQ=255) ttGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGc < 2:238179/150‑1 (MQ=255) ttGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCATTGCTATCCATAACGAAAAACCGTTACTACTTCTTACGCACGAACAGGACCAGATTGTGGTCCACCAGc > 2:570100/1‑150 (MQ=255) aGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCAt > 1:655018/1‑150 (MQ=255) aGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCAt > 1:3780628/1‑150 (MQ=255) aGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCAt > 1:4657398/1‑150 (MQ=255) ggACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATg > 1:3702529/1‑150 (MQ=255) gACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGc > 1:5525337/1‑150 (MQ=255) gACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGc > 1:4837922/1‑150 (MQ=255) gATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCg > 1:5891203/1‑150 (MQ=255) aTTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCTCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCgg > 2:1098027/1‑150 (MQ=255) aTTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCgg < 1:1723881/150‑1 (MQ=255) gcgGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGtt > 2:4926934/1‑86 (MQ=255) cacaGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGAttt < 2:6137421/150‑1 (MQ=255) aGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTcgc < 2:3448254/150‑1 (MQ=255) acaacaCATCTTTTAGCTCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCgcgc < 1:3521815/150‑1 (MQ=255) acaTCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGgcg > 2:473479/1‑150 (MQ=255) acaTCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGgcg > 2:4374395/1‑150 (MQ=255) aTCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCt < 2:3555978/150‑1 (MQ=255) ttttAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTtct < 2:1068122/150‑1 (MQ=255) tttAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTtctc < 2:3339211/150‑1 (MQ=255) cccAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTc > 2:1690948/1‑150 (MQ=255) ccAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCg < 2:5063421/150‑1 (MQ=255) ccAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCg < 1:975952/150‑1 (MQ=255) ccAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCg > 2:5847292/1‑150 (MQ=255) cAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCgg > 1:3382296/1‑150 (MQ=255) aaGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTTGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATc < 1:2635781/150‑1 (MQ=255) aaGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATc > 2:3875338/1‑150 (MQ=255) cacaAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCAt < 2:4092116/150‑1 (MQ=255) cacaAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCAt < 2:6854014/150‑1 (MQ=255) caAAGGCGACCTTCGGGTCGCCTTTGTTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTg < 1:1223262/124‑1 (MQ=255) caAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGa > 1:4796499/1‑150 (MQ=255) aaaGGCGACCTTCGGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGaa > 2:3839580/1‑150 (MQ=255) aaaGGCGACCTTCGGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGaa > 1:2519917/1‑150 (MQ=255) aaaGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGaa > 2:3787695/1‑150 (MQ=255) cGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGa < 1:2356504/150‑1 (MQ=255) gACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGAt < 2:3082482/150‑1 (MQ=255) gACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGAt < 2:2569069/150‑1 (MQ=255) gACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGAt < 1:540460/150‑1 (MQ=255) cccGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGATGa < 1:1033089/150‑1 (MQ=255) ccGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTcc < 1:2137965/76‑1 (MQ=255) ccGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTcc > 2:2137965/1‑76 (MQ=255) ccGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGATGAc > 2:4621096/1‑150 (MQ=255) ccGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGATGAc > 1:1830493/1‑150 (MQ=255) ccGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGATGAc > 2:1175650/1‑150 (MQ=255) cGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGATGACt < 1:3229528/150‑1 (MQ=255) | TGCTCGGCGGGATCGACCTGACCAAGGAATCCCTGGCCCATGCACGCAAGATGGTGGTGAGCGGCAAGGCCTGAGCCTTGCTTTTCCAGGACGATTCGCGGGCACAGACAACACATCTTTTAGCCCCAGAAAGCACAAAGGCGACCCGAAGGTCGCCTTTGCTATCCATAACGAAAAACCGTTACTTCTTCTTACGCACGTACAGGACCAGATTGTGGTCCACCAGCTCGAAGCCATGCTCGGCTACGATTTCGCGCTGGCGCTTCTCGATTTCGGCATCCATGAATTCGATGACTT > NC_002947/5385013‑5385309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |