Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,486,254 T→G 10.1% V249G (GTA→GGA)  PP_4819 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,486,2540TG10.1% 974.8 / 12.5 332V249G (GTA→GGA) PP_4819hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (45/240);  new base G (43/2);  total (90/242)
Fisher's exact test for biased strand distribution p-value = 9.73e-27
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 336 total aligned reads displayed.

CCCCGTGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCCTGCTGT  >  NC_002947/5486105‑5486403
                                                                                                                                                      |                                                                                                                                                     
 cccGTGCACGGTGCGTCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTa                                                                                                                                                      <  2:3247746/150‑1 (MQ=255)
 cccGTGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTa                                                                                                                                                      <  1:6556781/150‑1 (MQ=255)
 cccGTGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTa                                                                                                                                                      <  2:2646455/150‑1 (MQ=255)
 cccGTGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCGGCGCCGAACCG‑CGCAGGACGGCGAGCCCGtg                                                                                                                                                      >  2:366077/1‑149 (MQ=255)
  ccGTGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTag                                                                                                                                                     <  1:6004679/150‑1 (MQ=255)
   cGTGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTaga                                                                                                                                                    <  2:4840140/150‑1 (MQ=255)
   cGTGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTaga                                                                                                                                                    <  1:5243597/150‑1 (MQ=255)
     tGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGc                                                                                                                                                  <  2:1072970/150‑1 (MQ=255)
       cACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCGAACGG‑CGCAAGACGCCGAGCCCCTAGAGccc                                                                                                                                                >  2:4318048/1‑149 (MQ=255)
         cGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCt                                                                                                                                              <  2:6453712/150‑1 (MQ=255)
            tGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGcc                                                                                                                                           <  1:5941191/150‑1 (MQ=255)
             gCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGccc                                                                                                                                          <  2:1682828/150‑1 (MQ=255)
              cGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCg                                                                                                                                         <  2:585226/150‑1 (MQ=255)
               ggCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCGAACGG‑CGCATGACGACCAGCCCGTAGAGCCGCAGCCCgg                                                                                                                                        >  2:4133921/1‑150 (MQ=255)
                gCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGga                                                                                                                                       <  2:2574800/150‑1 (MQ=255)
                gCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGga                                                                                                                                       <  2:1997972/150‑1 (MQ=255)
                gCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGga                                                                                                                                       <  1:3505908/150‑1 (MQ=255)
                gCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCGAAAGG‑CGCCAGACGACGCGCCCGGAGAGCCGCGGCCCggc                                                                                                                                       >  2:5967601/1‑149 (MQ=255)
                 ccGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGGGCCGAAACG‑CGCCGGACCACCAGCCCCGAGAGCCGCGGccccggg                                                                                                                                      >  1:2119539/1‑146 (MQ=255)
                  cGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGgaga                                                                                                                                     <  2:3431875/150‑1 (MQ=255)
                       gcgATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGcc                                                                                                                                <  2:5495740/150‑1 (MQ=255)
                        cgATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCt                                                                                                                               <  1:1100715/150‑1 (MQ=255)
                        cgATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCt                                                                                                                               <  2:4440810/150‑1 (MQ=255)
                           tGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCGAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCAGCCCGGCGAGCGCCGGGa                                                                                                                            >  2:4494784/1‑150 (MQ=255)
                              ccAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCGAAAGG‑CGCATGACCCCCAGCCCCGCGAGCCCCTGCCCGGGGGGCGCCGGGAAcc                                                                                                                         >  2:1443772/1‑150 (MQ=255)
                               cAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCa                                                                                                                        <  1:2498994/150‑1 (MQ=255)
                               cAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGGAGAGCCGCTGCCCGGAGCGCGCCAGGGACCa                                                                                                                        >  2:5108092/1‑150 (MQ=255)
                               cAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGGAGAGCCGCAGCCCGGAGAGCGCCGGGAACCa                                                                                                                        >  2:4019655/1‑150 (MQ=255)
                               cAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACCG‑CGCCAGACGACCAGCCCCGAGAGCCGCTGCCCCGCGAGCGCCGGGGACCa                                                                                                                        >  2:2374049/1‑150 (MQ=255)
                                 gCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGGGGCGAAAGGCCGCATAAGAACAACCCCG‑ATAGCCGCAGGCCGGGGAGCGCCGGGGACCacg                                                                                                                      >  1:811068/1‑148 (MQ=255)
                                   ccGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCGAAAGG‑CGCCTGACGACGAGCCCGGAGAGCCGCTGCCCGGGGAGCGCCGGGAACCAGGcc                                                                                                                    >  2:2184493/1‑150 (MQ=255)
                                     gCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCtt                                                                                                                  <  1:6276294/150‑1 (MQ=255)
                                      cATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGTTCCAGGcgctc                                                                                                                 <  1:3839747/150‑5 (MQ=255)
                                        ttCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGcc                                                                                                               <  2:1042975/150‑1 (MQ=255)
                                         tCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCg                                                                                                              <  2:892501/150‑1 (MQ=255)
                                         tCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCGAACGG‑CGCATGACGACGAGCCCCGACAGCCGCAGCCCGGCGAGCGCCGGGGACCCGGCCTTGCCg                                                                                                              >  2:5021132/1‑150 (MQ=255)
                                              gAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCGGCCCGGAGAGCGCCAGGAACCAGGCCGTGCCGGCaaa                                                                                                         >  2:1613432/1‑150 (MQ=255)
                                              gAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCAAACGG‑CGCAAGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCGTGCCGGCaaa                                                                                                         >  2:6096709/1‑150 (MQ=255)
                                               aaCCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAAt                                                                                                        <  2:4640273/150‑1 (MQ=255)
                                                   gCTGCGCATCAGCGATGACGAAACCCCGGACACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGa                                                                                                    <  2:6655041/150‑1 (MQ=255)
                                                      gcgcATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCGGCGCCGAAACG‑CGCCAGACGCCGCGCCCCGAGAGCCGCGGCCCCGCGCGCGCCCGGAACCCCGCCGTGCCCGCCAAAcccaccc                                                                                                 >  1:1017030/1‑145 (MQ=255)
                                                           tCAGTGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAAAGG‑CGCAAGACGACGAGCCCGTAGAGCCCCAGCCCGGAGAGCGCCGGGAACCAGGCCATGCCCGCAAAAACGAGCGcccca                                                                                            >  2:2733956/1‑149 (MQ=255)
                                                           tCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTTCGCCAAAAGG‑CGCAAGACGACGAGCCCGTAGATCCCCATCCCGGAGAGCGCCAGGAACCAAGCCATTCCCGCAAAAACCAGCGcccca                                                                                            >  2:6186636/1‑149 (MQ=255)
                                                                  tgtcGACACCCCGGAATCGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTATCGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCTGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCTCGCaa                                                                                     <  2:1484879/147‑1 (MQ=255)
                                                                  tGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCaa                                                                                     <  1:2198510/150‑1 (MQ=255)
                                                                    aCGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAgg                                                                                   <  2:4380895/150‑1 (MQ=255)
                                                                          ccccGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCGGCGCCGAACCG‑CGCCTGACGGCGGGCCCGGTGAGCCCCTGCCCGGCGGGCGCCGGGGACCCGGCCGTGGCGGCCAAACCGAGCGCCCCCCGCGCCACGAGCCGc                                                                             >  2:954715/1‑150 (MQ=255)
                                                                                 aaCGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGa                                                                      <  1:4323461/150‑1 (MQ=255)
                                                                                  aCGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGAt                                                                     <  2:1783508/150‑1 (MQ=255)
                                                                                  aCGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGAt                                                                     <  1:2844231/150‑1 (MQ=255)
                                                                                  aCGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGAt                                                                     <  2:1284912/150‑1 (MQ=255)
                                                                                  aCGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGAt                                                                     <  1:4688173/150‑1 (MQ=255)
                                                                                  aCGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGAt                                                                     <  2:2873299/150‑1 (MQ=255)
                                                                                      gCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTgg                                                                 <  2:659910/150‑1 (MQ=255)
                                                                                      gCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTgg                                                                 <  1:4824204/150‑1 (MQ=255)
                                                                                      gCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTgg                                                                 <  2:3136761/150‑1 (MQ=255)
                                                                                       ccTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGt                                                                <  1:1488023/150‑1 (MQ=255)
                                                                                        cTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTc                                                               <  2:3014342/150‑1 (MQ=255)
                                                                                          gAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTcga                                                             <  1:1275684/150‑1 (MQ=255)
                                                                                             cgcCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTcgacga                                                          <  1:6426943/150‑1 (MQ=255)
                                                                                              gcCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCgacgac                                                         <  1:445894/150‑1 (MQ=255)
                                                                                                    gacgacgaGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTg                                                   <  1:6068102/150‑1 (MQ=255)
                                                                                                       gacgaGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAg                                                <  1:3459930/150‑1 (MQ=255)
                                                                                                           aGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAg                                            <  1:5143435/150‑1 (MQ=255)
                                                                                                               aCTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTg                                        <  1:286203/150‑1 (MQ=255)
                                                                                                               aCTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTg                                        <  1:3605328/150‑1 (MQ=255)
                                                                                                                 gggCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCTCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTggg                                      <  1:6696409/149‑1 (MQ=255)
                                                                                                                      cTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGaaaaa                                 >  2:6214055/1‑150 (MQ=255)
                                                                                                                       tGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAAc                                <  1:5591936/150‑1 (MQ=255)
                                                                                                                            cTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCa                           <  1:6862942/150‑1 (MQ=255)
                                                                                                                            cTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCa                           <  2:1984819/150‑1 (MQ=255)
                                                                                                                            cTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCa                           <  1:2733956/150‑1 (MQ=255)
                                                                                                                            cTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCa                           >  2:2419578/1‑150 (MQ=255)
                                                                                                                             tAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCAc                          <  1:2030322/150‑1 (MQ=255)
                                                                                                                             tAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCAc                          <  2:4713582/150‑1 (MQ=255)
                                                                                                                              aaCGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCAcc                         <  2:3935552/150‑1 (MQ=255)
                                                                                                                              aaCGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCAcc                         <  2:6797460/150‑1 (MQ=255)
                                                                                                                               aCGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCAccc                        <  1:3733065/150‑1 (MQ=255)
                                                                                                                                 gg‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCaa                      >  1:15254/1‑150 (MQ=255)
                                                                                                                                     gcATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTg                   >  2:4555953/1‑150 (MQ=255)
                                                                                                                                      cATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTgg                  <  2:3960151/150‑1 (MQ=255)
                                                                                                                                       aTGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTggg                 <  1:5398509/150‑1 (MQ=255)
                                                                                                                                       aTGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTggg                 <  1:1787094/150‑1 (MQ=255)
                                                                                                                                        tGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTgggg                <  1:3216574/150‑1 (MQ=255)
                                                                                                                                        tGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTgggg                >  2:2122506/1‑150 (MQ=255)
                                                                                                                                         gacgacGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGc               >  2:2687937/1‑150 (MQ=255)
                                                                                                                                            gacgaGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAg            >  2:689515/1‑150 (MQ=255)
                                                                                                                                            gacgaGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAg            >  1:3939520/1‑150 (MQ=255)
                                                                                                                                             acgaGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAgc           <  2:5257450/150‑1 (MQ=255)
                                                                                                                                             acgaGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAgc           <  2:6435128/150‑1 (MQ=255)
                                                                                                                                               gaGCCGGTAGAGCCTCTGCCCGGAGAGCGCCTTGAACCAGGCCTTGCCGGCAAATCAGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAgcgc         <  1:4019665/150‑1 (MQ=255)
                                                                                                                                               gaGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAgcgc         <  2:3582833/150‑1 (MQ=255)
                                                                                                                                               gaGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAgcgc         <  2:3841400/150‑1 (MQ=255)
                                                                                                                                                 gCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCct       >  1:528513/1‑150 (MQ=255)
                                                                                                                                                   ccGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCctgc     <  2:3289163/150‑1 (MQ=255)
                                                                                                                                                   ccGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCctgc     <  2:3780722/150‑1 (MQ=255)
                                                                                                                                                   ccGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCctgc     <  2:291690/150‑1 (MQ=255)
                                                                                                                                                    cGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCctgct    >  1:2641728/1‑150 (MQ=255)
                                                                                                                                                     gTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCctgctg   <  1:3281905/150‑1 (MQ=255)
                                                                                                                                                      tAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCCTGCtgt  <  1:3125096/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CCCCGTGCACGGTGCGGCCGAACGCGATGACCAGCCCGCATTCAGCGAACCGCTGCGCATCAGCGATGACGAAACCCCGGAAACGGGCCTGAGCGCCCGCGACGACGAGCCACTGGCGCTGCGCCTAACGG‑CGCATGACGACGAGCCCGTAGAGCCGCTGCCCGGAGAGCGCCTGGAACCAGGCCTTGCCGGCAAATCCGAGCGCCCCTCGCGCAAGGAGCCGCTGGTCGATGTGGTCGACGACCCATTGCAGCTAGGCTGGGAAAAACCCGCACCCAACTGGGGCAAGCGCCTGCTGT  >  NC_002947/5486105‑5486403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑