| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,490,168 | C→T | 14.6% | intergenic (+77/‑70) | purH → / → purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,490,168 | 0 | C | T | 14.6% | 396.7 / 55.8 | 176 | intergenic (+77/‑70) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Reads supporting (aligned to +/- strand): ref base C (63/82); new base T (13/12); total (77/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.27e-02 | |||||||||||
Only 100 of 188 total aligned reads displayed.
TGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGA > NC_002947/5490019‑5490316 | tGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑Ccgccgc < 1:2110179/150‑1 (MQ=255) gTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTc < 1:584186/150‑1 (MQ=255) tCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGGTGGCCGCGCAAACGAAGGTTG‑TTTAA‑ACGCCCCACTcg > 2:2291341/1‑150 (MQ=255) caccGCTGCTGCCGACGAGGCCGGCAACGCGATGCTCTTCACTGGCATGCGCCACTTCCGCCACTAATGACGCGGATCCCGAGTCAAGTCGAGATCCTGTCGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTcgc < 1:6027056/147‑1 (MQ=255) cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGA‑ATCCA‑CCATCGTATTcgc < 1:497813/150‑1 (MQ=37) cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTcgc < 2:2209090/150‑1 (MQ=255) cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTcgc < 1:3011337/150‑1 (MQ=255) ctCGCTGCCGCCGCCGCCGCCGGCCTCGCGAGGGCCTTCCCCGGCACGCGCCACGGCCGCCACTACTGCCGCGGACCCCGCGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGGGG‑ATTCA‑CCGCCGCATTcgcg < 2:5639194/149‑1 (MQ=255) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCGTGCCCGCGCAAACCATTGTGG‑GTTCA‑CCCCCCCAGTcgcg > 2:1540545/1‑150 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGA‑ATCCA‑CCATCGTATTCGCgg < 2:5128399/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCgg < 1:3825426/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCgg < 2:1171947/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCgg < 1:2817720/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCgg < 2:3165218/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCgg < 1:1138718/150‑1 (MQ=255) tCGCGGCTGCCGACGAGGCCGGCATCGCGATGGTCGTCACTGGCATGCGCCACTTCCGCCACTACTTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTGGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCgg < 2:616329/150‑1 (MQ=255) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCggg < 1:3767148/150‑1 (MQ=255) tgctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCTAGTCGAGATCCTGTGGGAGCGGGCGTGGCCGCGCATGCCTGGGGGG‑CGTGA‑CCGCCGGAGTCGCGGGcgc > 2:4263945/1‑148 (MQ=255) cgacgaGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCCCGAAAAAGCTTGTGG‑AATAA‑CACCCGCAATAGCGGGCAA‑Accccc > 2:6088265/1‑148 (MQ=255) cgaGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGGGGCCCCCCCAAACGAAGGTGG‑CTTGA‑ACCCCCCGGTCCCGCGCAA‑Gcccccgcc > 2:6631553/1‑145 (MQ=255) gcgggCAGCGGGTTGGGCTTCAGTGGCATGCGCCACTTCCGCCAATATTTACGCGTTGCCCGTGGCTTGTGTAGTGCCGTTGGGAGGGGGCTTGCCCGCTATTTCGATGGTGT‑TTTCC‑CCGCCGCATTCGGGGCCAT‑GCCCGCTCCcact < 2:5034711/147‑2 (MQ=255) gCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCGTTCCCCCGAAAAAGATGGTGG‑TTTGA‑ACGCCGCAGTGGCGGGGCA‑GCCCGCGCCcaaa > 2:6557934/1‑148 (MQ=255) cATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCGTTCCCCCGCCAACGATGGGGG‑GTTAACCCCCCGCA‑TCGCGGGCAC‑GCCCGCGCCCACCGGGtt > 2:4871634/1‑150 (MQ=255) gcgcgtgggTCTCCAGGGGCTTGCGCCAGTCCCCCCACTACTTCCGGGGAGCCCGCGGCACGGCCAGAGCCTGTGGGCGCGGGCTGGCCCGCTAATCCGTTGGTGG‑ATCCA‑CCGCCGCATTGGGGGGCAA‑GCCCGCTCCCACAGTGTTCg < 2:4645721/143‑1 (MQ=255) cgcgATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGA‑ATCCA‑CCATCGTATTcgc < 2:6057519/123‑1 (MQ=21) cgcgATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCgg < 2:6269125/150‑1 (MQ=255) gcgTTGGTCTCCACGGGCTGGCGCCACTTCCCCCACAACTCCGGCGGACCCCGTGCCAAGGCCTGACCGTGTGGGCGGGGGCTTGCCCGCCAATACTCTGGTTT‑ATACA‑CCGCCGCTTCCGCGGCCAA‑GCCCGCTCCCACAGTGTTCGgc < 2:1899462/150‑1 (MQ=255) gtaTGGTCTACACGGGCTGGCGCCACTCCCCCCACTATTCAGGGGTAGCCCGAGCCACGCGCAGATCGTGTGGGAGCGGGGTTCCCCGCCAAAACGTGGGGGT‑ATTCA‑CCGCGGCTTTCGCGGGCAC‑GCCCGCTCCCACAGTGTTCGgcg < 2:3649290/148‑1 (MQ=255) tCAGTGGCTTGCGCCACTCCCGCAACTAATTACGGGGAACCCGAGGCATGTCGAGATCCTGTGGGAGGGGGCTTGCCCGCTAATAGGTTGGTGG‑ATTCA‑CCGCCGCATTCGGGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACg < 2:1995069/150‑1 (MQ=255) cACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGGTGGCCGCGCATACGCTGGTGG‑GTTGA‑CCCCCCCCGTAGCGGGCCA‑CCCCCCGCCCACCCGGTTCGGCGCAAGcccccg > 1:5623480/1‑146 (MQ=255) cACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGGGGGAGCGGGCTGGCCCGCGAAACCGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACgg < 2:6713245/150‑1 (MQ=255) gccggcgcCACTTCCGCCACTACTTACGCGGATCCCGCGGCACGGCGCTAGCCTGGGGGAGGGGGCTGGCCCGCGAATACTAGGGTGG‑TTCCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCa < 2:2584986/146‑1 (MQ=25) gccggcgcCACGTCCGCCACTACTTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGATGGTCCGCGAATACGAGGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCa < 2:4506727/146‑1 (MQ=38) tGCGCCACTACCGCCACTAATAACGCCGATCCCGCGGCAAGCCGAGAGCCTGTGGGCGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCACGCCACGGGATCACtt < 2:2698029/150‑1 (MQ=37) gcCACTTCCGCCACTAATTACGGGGATCCCGAGGCATGCCGAGATCCTGTGGGAGGGGGCGTGCCCGCTAATCCTTTGGTGT‑ATACC‑CCGCCGCTTTCGCGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGaa < 2:5810548/150‑1 (MQ=255) ccACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGAAGGTGG‑CTTCA‑CCGCCGCATTAGCGGGCAA‑GCCCCCGCCCCCCGAGTTAGGCGCAAGCCACGGGCTCACTTGAAt > 2:5665207/1‑150 (MQ=255) cACTCCCGCCACTAATTCGGCGGATCCCGAGGCAAGTCGAGAGCGTGTGGGCGCGGGCTGGCCCGCTAATACGATGGTGT‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATc < 2:4734542/150‑1 (MQ=38) ctcccGCCACTAATCCCGCGGACCCGGAGCCACGGCGCCATCCGGGGGGAGCGGGCTGGCCCGCCAATCCGATGTGGG‑ATCCC‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGa < 2:5336646/147‑1 (MQ=255) cTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGa < 2:3301528/150‑1 (MQ=255) cTTCCCCCAATTATTCCGCGGAGCCCGAGGCACGTCTCGATCCTGTGGGAGGGGGCTGGCCCGCGAAAAGGTTGGTGT‑ATTCC‑CCGCCGCATTCGGGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGa < 2:5949536/150‑1 (MQ=255) ttCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCTAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAg < 2:4461148/150‑1 (MQ=255) ccACTACTTCCGCGGAGCCCGCGGCACGTCGCGTTCCTGTGGGGGGGGGGTGGCCCGGGAATCCGTTGGTGG‑ATTCC‑CCGCCGCTTTCGGGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 2:715474/150‑1 (MQ=255) ccAATAATTACGCGGATCCCGAGGCAAGTCGATATCCCGTGGGAGCGGGCTTGCCCGCGAATACGTTGGTGT‑ATTCA‑CCGCCGCATTCGCGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 2:420074/150‑1 (MQ=38) gcgGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGGAAACCGAGGGGG‑ATTGA‑CCCCCCCCGGGGCGGGCCC‑GCCCCCGCCCCCCGGGGTCGGCGCCACCCCCCGGCTCACGGGGAGCGAGGGGTTGACCGGAAAGt > 2:5525819/1‑150 (MQ=255) cgGATCCCTCGCCAAGTCGATTTCCTGTGGGAGCGGGCTTGCCCGCTAATACGTTGGTGT‑TTTCA‑CCGCCGCTTTCGCGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtt < 2:2398478/150‑1 (MQ=37) gATCCCGAGGCACGTCGATATCGTGTGGGAGCGGGCTTGCCCGCTAATCCGAGGGTGG‑ATTCA‑CCGCCGCATTGGGGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGAAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtttt < 2:4087096/150‑1 (MQ=38) cggaatgTCGAGATCGTGTGGGAGGGGGCTGGCCCGCTAATCCGTGGGTGG‑ATTCA‑CCGCGGCTTTGGGGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGatcatc < 2:5775083/144‑1 (MQ=255) cggaacgTCGAGATCTTGTGGGTGGGGGCTGGCCCGCTAATACTTTGGTGT‑TTTCC‑CCGCCGCATTCGGGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGatcatc < 1:1619379/144‑1 (MQ=255) ggCACGTCGAGATCCGGGGGGCGGGGGCTTGCCCGCTAATCCGTTGGTGG‑ATACA‑CCGCCGCATTCGCGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCg < 2:6330682/150‑1 (MQ=255) tCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGcc < 2:3942398/150‑1 (MQ=255) gtgggggTGCGGGCTGGCCCGCAAATA‑GTTGGTGGTATCCC‑CCGCCCAAGTCG‑GGGCAACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGt < 1:2643032/146‑1 (MQ=255) gtgGGAGGGGGCTTGCCCGCGAATACGTTGGTGT‑ATTCA‑CCGCCGCATGCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:4325862/150‑1 (MQ=255) gtgGGAGCGGGCTTGCCCGCTAATACGATGGTGG‑ATCCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:3270326/150‑1 (MQ=255) gtgGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:500013/150‑1 (MQ=255) attcgCGGGCAAGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGc > 1:1753942/5‑150 (MQ=255) ggAGCGGGCTTGCCCGCTAATACGTTGGTGT‑ATCCC‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCa < 2:944350/150‑1 (MQ=39) ggCTTGCCCGCGAATGCGGCGGTGA‑ATCCA‑CCATCGTATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcct > 1:6731532/1‑150 (MQ=25) gCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 1:48986/1‑150 (MQ=255) gCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 1:6111068/1‑150 (MQ=255) gCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCAAGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCAGTGAGCACGCcctg > 2:2463370/1‑150 (MQ=255) ttGCCCGCGAATGCGGCGGTGA‑ATCCA‑CCATCGTATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGACTCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 1:3622870/1‑150 (MQ=25) gCCCGCTAATACGATGGTGT‑ATCCC‑CCGCCGCATTCGGGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct < 2:1853504/150‑1 (MQ=255) gCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct > 1:1805348/1‑150 (MQ=255) cccGCTAATACGAGGGTGG‑TTTCA‑CCGCCGCTTTCGCGGGAAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg < 2:3447686/150‑1 (MQ=255) cccGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 1:6195466/1‑150 (MQ=255) ccGCGAATGCGGCGGTGA‑ATCCA‑CCATCGTATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3957378/1‑150 (MQ=37) ccGCGAATGCGGCGGTGA‑ATCCA‑CCATCGTATTCGCGGGCAA‑GCCCGCTCCCACAG‑GATCTCGACTTGCCTCGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:2232503/1‑150 (MQ=14) ccGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:383699/1‑150 (MQ=255) ccGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:6230590/1‑150 (MQ=255) ccGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:4796211/1‑150 (MQ=255) ccGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:5439640/1‑150 (MQ=255) ccGCGAATACGATGGAGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACAGGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGTcctggcctgg > 1:4071692/1‑150 (MQ=255) gcgAATGCGGCGGTGA‑ATCCA‑CCATCGTATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:1229975/1‑150 (MQ=37) gcgAATGCGGCGGTGA‑ATCCA‑CCATCGTATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:6784992/1‑150 (MQ=37) gcgAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:825610/1‑150 (MQ=255) gcgAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:4130094/1‑150 (MQ=255) gcgAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:4431418/1‑150 (MQ=255) cgAATGCGGCGGTGA‑ATCCA‑CCATCGTATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaaa < 1:4289748/150‑1 (MQ=37) aaTACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGt < 2:6207158/150‑1 (MQ=255) aTACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc > 1:6473907/1‑150 (MQ=255) cGAGGGTGG‑ATTCA‑CCGCCGCCTTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGcc < 2:6042725/150‑1 (MQ=255) gATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCTCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:1364766/1‑150 (MQ=255) gATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCTCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:67397/1‑150 (MQ=255) gATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCg < 1:5690887/114‑1 (MQ=255) gATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:6563250/1‑150 (MQ=255) gATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 1:2565330/1‑150 (MQ=255) tggtgg‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGACAGTCGCCCAg > 2:5334083/1‑150 (MQ=255) gg‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAcc > 1:5738080/1‑150 (MQ=255) gg‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCAGGCCTGGAAAGTCGCCCAGGAcc > 1:1225150/1‑150 (MQ=255) ttCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAg < 1:856858/72‑1 (MQ=255) tacA‑CCGCCGCATGCGCGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAc < 1:1115036/148‑1 (MQ=255) cA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAcgc < 2:1086376/150‑1 (MQ=255) a‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAcgcg > 2:2958541/1‑150 (MQ=255) ccgccgCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGt > 2:1618556/1‑150 (MQ=255) cgccgcATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc > 2:3011019/1‑150 (MQ=255) cgccgcATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc < 2:1702338/150‑1 (MQ=255) ccgcATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCga > 2:383299/1‑150 (MQ=255) ccgcATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCga > 2:1046504/1‑150 (MQ=255) gcATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCgaga > 2:4343388/1‑150 (MQ=255) gcAGTCGCGGGCAC‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCgaga < 2:4719194/150‑1 (MQ=255) | TGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGG‑ATTCA‑CCGCCGCATTCGCGGGCAA‑GCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGA > NC_002947/5490019‑5490316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |