| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,619,048 | A→G | 5.3% | intergenic (+30/+52) | PP_4933 → / ← hldE | hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,619,048 | 0 | A | G | 5.3% | 1040.6 / 27.5 | 322 | intergenic (+30/+52) | PP_4933/hldE | hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (135/169); new base G (10/7); total (145/177) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 324 total aligned reads displayed.
GATTGGGTGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAG > NC_002947/5618899‑5619197 | ttGGGTGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGc < 2:1967851/150‑1 (MQ=255) ttGGGTGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGc > 1:6872763/1‑150 (MQ=255) gggTGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCgg < 1:2375962/150‑1 (MQ=255) ggTGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGGGCggg < 1:1959292/150‑1 (MQ=255) ggTGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCggg > 2:3687316/1‑150 (MQ=255) gcagcaGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAcc > 2:4760857/1‑150 (MQ=255) gcagcaGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAcc > 2:2665077/1‑150 (MQ=255) cagcagGGGTTGGTGGAAAGCACGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAccc < 2:2306391/150‑1 (MQ=255) gcagGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGc > 1:428496/1‑150 (MQ=255) gcagGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGc > 1:3374318/1‑150 (MQ=255) gggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGGGCGGGTTTACCCGCTCca < 2:6468398/150‑1 (MQ=255) gggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGccccn < 1:938589/150‑2 (MQ=255) gggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCca < 2:695719/150‑1 (MQ=255) gggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCca < 1:1773096/150‑1 (MQ=255) ggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCcag < 1:5815184/150‑1 (MQ=255) gTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCcagc > 2:5012456/1‑150 (MQ=255) tggtggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCcagcag < 1:3970249/150‑1 (MQ=255) tggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAgg > 2:2987608/1‑150 (MQ=255) tggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAgg > 2:4233927/1‑150 (MQ=255) aggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGACCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAgg > 2:2408968/2‑150 (MQ=255) ggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAATCCCGCCCCAGCAGAggg > 2:6078763/1‑150 (MQ=255) ggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAggg > 1:2727870/1‑150 (MQ=255) ggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTAGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAggg > 2:1896483/1‑150 (MQ=255) gAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGgc > 1:4514747/1‑150 (MQ=255) gcaagcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACCTCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGgccgcc > 1:1000070/1‑150 (MQ=255) caagcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGccgccg > 1:2779881/1‑150 (MQ=255) agcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGaa > 2:5158764/1‑150 (MQ=255) cccGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGTAGAGGGCCGCCGAAGc > 1:5641081/1‑150 (MQ=255) ggCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGTGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCaa < 1:15329/150‑1 (MQ=255) ggCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCaa < 1:15716/150‑1 (MQ=255) cGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGACCAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAgg < 2:593517/150‑1 (MQ=255) gTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGt > 1:3682094/1‑150 (MQ=255) gTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGt < 2:1373967/150‑1 (MQ=255) tCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTc > 1:1854160/1‑150 (MQ=255) gCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAg > 1:3001486/1‑150 (MQ=255) gCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAg > 2:6511285/1‑150 (MQ=255) cACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGa > 2:406324/1‑150 (MQ=255) ttGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCa > 2:4425410/1‑150 (MQ=255) ttGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCa < 2:3815917/150‑1 (MQ=255) aaCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTc < 1:6647447/150‑1 (MQ=255) aaCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTc > 2:3236157/1‑150 (MQ=255) aaCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTc > 2:3236263/1‑150 (MQ=255) aaCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTc > 1:2081222/1‑150 (MQ=255) cGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCtt < 1:6847018/150‑1 (MQ=255) cTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGc < 1:4337207/150‑1 (MQ=255) gCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAAtt < 1:5463178/150‑1 (MQ=255) aaGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTtctc < 1:2139110/150‑1 (MQ=255) gcgcGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGAc > 1:6362828/1‑150 (MQ=255) gcgcGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGAc > 2:4959371/1‑150 (MQ=255) gcgcGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGAc < 1:4901112/150‑1 (MQ=255) gcgcGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGAc > 1:5930768/1‑150 (MQ=255) gcgAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACaa > 2:3281354/1‑150 (MQ=255) ctgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTTAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGt < 2:3056821/150‑1 (MQ=255) ctgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGt < 1:6557417/150‑1 (MQ=255) ctgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGt < 2:2183079/150‑1 (MQ=255) tgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTg > 1:1777631/1‑150 (MQ=255) tgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTg < 2:5307745/150‑1 (MQ=255) gctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCCGATCAGGTCTTGCGAATTTTCTCGACAATCGCCGTgg > 2:2931278/1‑150 (MQ=255) ctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGAGCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGt > 2:6810125/1‑150 (MQ=255) tgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTc > 2:1235000/1‑150 (MQ=255) tgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTc < 2:1308955/150‑1 (MQ=255) ggAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCg > 1:1737776/1‑150 (MQ=255) ggAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCg > 2:5751839/1‑150 (MQ=255) gAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGa < 1:3943880/150‑1 (MQ=255) aGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAg < 2:4495720/150‑1 (MQ=255) cGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTCCTCGACAATCGCCGTGGTCGAGCt < 2:3581733/150‑1 (MQ=255) gggCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTg < 1:3526033/150‑1 (MQ=255) cgcgGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtc < 1:6178819/150‑1 (MQ=255) cgcgGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtc > 1:1245719/1‑150 (MQ=255) cgGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtctc < 2:1719328/150‑1 (MQ=255) ggTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCg > 2:6862381/1‑150 (MQ=255) gTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGa < 2:5553900/150‑1 (MQ=255) gCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGcc > 1:4720233/1‑150 (MQ=255) tGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGcccc < 2:395625/150‑1 (MQ=255) gAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCa < 2:1071718/150‑1 (MQ=255) aCAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGc < 1:3844204/150‑1 (MQ=255) aCATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCa < 2:3475381/150‑1 (MQ=255) aTCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACg < 1:2887446/150‑1 (MQ=255) tCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACgg < 2:6434149/150‑1 (MQ=255) ccGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTg > 1:1096341/1‑150 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgc < 2:4550790/150‑1 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgc > 2:6270422/1‑150 (MQ=255) gAAAGCTTTCACCTGCTTGCTGGAGAGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCGTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCCGCCCCAGCACCTTCACGGTgcc > 2:4726879/1‑150 (MQ=255) aaaGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgccg < 1:321418/150‑1 (MQ=255) aaaGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgccg < 2:1579203/150‑1 (MQ=255) aaaGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCGTGAAGGTgctg < 1:2289590/150‑3 (MQ=255) gCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCa < 1:4115168/150‑1 (MQ=255) tttCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATa > 1:1429867/1‑150 (MQ=255) tttCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTGCACGGTGCCGCCAtc > 2:6684360/1‑149 (MQ=255) aCCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGccc < 1:254097/150‑1 (MQ=255) cTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCtt > 2:3610864/1‑150 (MQ=255) gcttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGa < 1:2665077/150‑1 (MQ=255) gcttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGa > 1:2459504/1‑150 (MQ=255) ctctgctGGGGCGGGTTTACCCGCTCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATCGCCCTGGa > 2:3737191/4‑150 (MQ=255) tctgctGGGGCGGGTTTACCCGCTCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGAc > 1:3055053/3‑150 (MQ=255) tctgctGGGGCGGGTTTACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtc < 2:18316/104‑1 (MQ=39) cttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGAc > 1:4805009/1‑150 (MQ=255) cttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGAc < 1:5619510/150‑1 (MQ=255) tGGGGCGGGTTTACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGatat > 1:4187534/1‑150 (MQ=255) tGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGatat < 1:5221103/150‑1 (MQ=255) | GATTGGGTGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAG > NC_002947/5618899‑5619197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |