| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,619,055 | A→T | 5.8% | intergenic (+37/+45) | PP_4933 → / ← hldE | hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,619,055 | 0 | A | T | 5.8% | 1047.6 / 35.3 | 318 | intergenic (+37/+45) | PP_4933/hldE | hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (133/165); new base T (12/7); total (146/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 323 total aligned reads displayed.
TGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGCACCCAC > NC_002947/5618906‑5619204 | gAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCATCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTaa > 2:1538154/1‑150 (MQ=255) gcagcaGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAcc > 2:2665077/1‑150 (MQ=255) gcagcaGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAcc > 2:4760857/1‑150 (MQ=255) cagcagGGGTTGGTGGAAAGCACGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAccc < 2:2306391/150‑1 (MQ=255) gcagGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGc > 1:3374318/1‑150 (MQ=255) gcagGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGc > 1:5845638/1‑150 (MQ=255) agGGGTTGGTGGAAAGCACGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGccc < 2:5345283/150‑1 (MQ=255) gggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCca < 2:695719/150‑1 (MQ=255) gggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCca < 1:1773096/150‑1 (MQ=255) gTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCcagc > 2:5012456/1‑150 (MQ=255) tggtggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCcagcag < 1:3970417/150‑1 (MQ=255) tggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAgg > 2:2987608/1‑150 (MQ=255) tggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAgg > 2:1716530/1‑150 (MQ=255) gAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGgc > 1:4514747/1‑150 (MQ=255) aagcaagcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGgccg > 1:6391721/1‑150 (MQ=255) gcaagcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACCTCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGgccgcc > 1:1000070/1‑150 (MQ=255) gcaagcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGgccgcc < 2:1109156/150‑1 (MQ=255) agcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGaa > 2:5158764/1‑150 (MQ=255) agcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGaa < 2:3880003/150‑1 (MQ=255) ccGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCg > 1:4382879/1‑150 (MQ=255) ggCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGTGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCaa < 1:15329/150‑1 (MQ=255) ggCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCaa < 1:15716/150‑1 (MQ=255) gTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGt < 2:1373967/150‑1 (MQ=255) gTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGt < 2:5934828/150‑1 (MQ=255) gTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGt > 2:1016490/1‑150 (MQ=255) gTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGt > 1:3682094/1‑150 (MQ=255) gTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGATCTGCTTGAGCGGGCGCGGTACTCGCTGAACAAGTGACATCCCTAAATCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCATCAGAGGGCATCCGAAGCTTCCCCAAGGt < 2:3410247/150‑1 (MQ=255) tCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTc < 2:4208589/150‑1 (MQ=255) tCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTc > 1:1854160/1‑150 (MQ=255) cACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGa < 2:6572504/150‑1 (MQ=255) gCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGt < 2:4522591/150‑1 (MQ=255) cAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGtt > 1:2862042/1‑150 (MQ=255) aaCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTc > 2:3236157/1‑150 (MQ=255) aaCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTc > 2:3236263/1‑150 (MQ=255) aaCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTc < 1:6647447/150‑1 (MQ=255) aCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCt < 2:6174571/150‑1 (MQ=255) cTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGc < 1:5622345/150‑1 (MQ=255) tttGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCg > 1:6062012/1‑150 (MQ=255) gACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAAtttt > 2:3589444/1‑150 (MQ=255) cAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTtct < 2:6075636/150‑1 (MQ=255) aaGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTtctc < 1:2139110/150‑1 (MQ=255) aaGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTtctc < 1:2270625/150‑1 (MQ=255) gcgcGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGAc > 2:4959371/1‑150 (MQ=255) gcgAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACaa > 2:3281354/1‑150 (MQ=255) ctgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTTAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGt < 2:3056821/150‑1 (MQ=255) ctgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGt < 1:6557417/150‑1 (MQ=255) ctgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGt < 2:2183079/150‑1 (MQ=255) tgctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTg > 1:1777631/1‑150 (MQ=255) gctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCCGATCAGGTCTTGCGAATTTTCTCGACAATCGCCGTgg > 2:2931278/1‑150 (MQ=255) gctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTgg > 2:2029468/1‑150 (MQ=255) ctgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGAGCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGt > 2:6810125/1‑150 (MQ=255) tgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTc < 2:4020354/150‑1 (MQ=255) ggAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCg > 2:5751839/1‑150 (MQ=255) ggAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCg < 1:4999467/150‑1 (MQ=255) gAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGa < 2:6477833/150‑1 (MQ=255) gggCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTg < 1:3526033/150‑1 (MQ=255) gggCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTg > 1:711799/1‑150 (MQ=255) cgcgGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtc > 2:1898053/1‑150 (MQ=255) cgcgGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtc > 1:1245719/1‑150 (MQ=255) cgcgGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtc < 1:4298770/150‑1 (MQ=255) ggTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCg > 2:6862381/1‑150 (MQ=255) gTCCTCGCTGAACAAGTGTCATCCCGAAAGCGTTCTGCTGCTTGCTGGAGGGGGTAAAGCCGCCCGAGCAGTGGGCCGGCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGGCGTGGTCGAGCTGTTGTCGa < 2:245495/150‑1 (MQ=255) gTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGa < 2:5553900/150‑1 (MQ=255) gCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGcc > 1:4720233/1‑150 (MQ=255) aCAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGc < 1:3844204/150‑1 (MQ=255) cATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCAc < 2:3682094/150‑1 (MQ=255) aTCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAAtttt > 1:5715848/1‑98 (MQ=255) aTCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACg > 1:2763273/1‑150 (MQ=255) ccGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTg > 1:1096341/1‑150 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGTGTAAACCCGTCCCAGCAGATGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCGCATCACCTTCAGGGTgc < 2:354920/150‑1 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgc > 2:6270536/1‑150 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgc < 1:5414304/150‑1 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgc < 1:3029047/150‑1 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgc < 2:3775509/150‑1 (MQ=255) gAAAGCTTTCACCTGCTTGCTGGAGAGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCGTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCCGCCCCAGCACCTTCACGGTgcc > 2:4726879/1‑150 (MQ=255) aaaGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgccg < 1:321418/150‑1 (MQ=255) gCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCa < 1:4115168/150‑1 (MQ=255) tttCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGTAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCCTa > 1:2349262/1‑150 (MQ=255) tttCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATa > 2:6452708/1‑150 (MQ=255) tttCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATa > 1:1429867/1‑150 (MQ=255) tCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGc < 1:2955501/150‑1 (MQ=255) cACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGcc < 1:6301194/150‑1 (MQ=255) aCCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCCTAGccc > 1:3946665/1‑150 (MQ=255) aCCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGccc > 1:549068/1‑150 (MQ=255) aCCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGccc < 1:254097/150‑1 (MQ=255) gcttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGa > 1:2459504/1‑150 (MQ=255) gcttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGa < 1:2665077/150‑1 (MQ=255) ctctgctGGGGCGGGTTTACCCGCTCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGa > 1:4846273/4‑150 (MQ=255) tctgctGGGGCGGGTTTACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtc < 2:18316/104‑1 (MQ=39) cttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGAc > 1:4805009/1‑150 (MQ=255) tGGGGCGGGTTTACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGatat > 1:4187534/1‑150 (MQ=255) tGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGatat < 1:2039667/150‑1 (MQ=255) tGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTCGACGatat > 2:4490408/1‑150 (MQ=255) gAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGCTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCa < 2:1282777/150‑1 (MQ=255) gCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGc > 2:3735617/1‑150 (MQ=255) ggTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGcacc > 1:2118892/1‑150 (MQ=255) tAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCATGGTGCCGCCATAGCCCTTGACGATATCAGcaccca < 1:6863802/150‑1 (MQ=255) tAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGcaccca < 2:428496/150‑1 (MQ=255) tAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGcaccca > 2:6710436/1‑150 (MQ=255) aaaCCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGcacccac > 1:1665261/1‑150 (MQ=255) | TGAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGCACCCAC > NC_002947/5618906‑5619204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |