Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,628,395 G→T 6.0% R115R (CGG→AGG)  PP_4941 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,628,3950GT 6.0% 1111.1 / 38.6 329R115R (CGG→AGG) PP_4941hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (115/193);  new base T (13/7);  total (129/200)
Fisher's exact test for biased strand distribution p-value = 1.78e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 334 total aligned reads displayed.

ACCCTGCAGCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGTCGTAGGCAT  >  NC_002947/5628246‑5628544
                                                                                                                                                     |                                                                                                                                                     
aCCCTGCAGCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCg                                                                                                                                                       >  1:329946/1‑150 (MQ=255)
 cccTGCAGCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGa                                                                                                                                                      <  1:2160154/150‑1 (MQ=255)
  ccTGCAGCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAg                                                                                                                                                     <  1:1273036/150‑1 (MQ=255)
   cTGCAGCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAgg                                                                                                                                                    >  1:4948027/1‑150 (MQ=255)
    tGCAGCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAggg                                                                                                                                                   <  2:1434371/150‑1 (MQ=255)
      cAGCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTc                                                                                                                                                 <  1:5887306/150‑1 (MQ=255)
        gCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCga                                                                                                                                               <  2:5847544/150‑1 (MQ=255)
          cGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCTCGGGTCgagc                                                                                                                                             <  1:1529005/150‑2 (MQ=255)
           ggCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCTCGGGTCgagct                                                                                                                                            <  1:1598044/150‑3 (MQ=255)
           ggCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCTCGGGTCgagct                                                                                                                                            <  2:6855355/150‑3 (MQ=255)
           ggCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGaa                                                                                                                                            >  1:5995770/1‑150 (MQ=255)
            gCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGaaa                                                                                                                                           <  1:4680954/150‑1 (MQ=255)
            gCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGaaa                                                                                                                                           <  1:565312/150‑1 (MQ=255)
             cAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAg                                                                                                                                          <  2:2111411/150‑1 (MQ=255)
              aaTGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAgc                                                                                                                                         >  1:6350375/1‑150 (MQ=255)
              aaTGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAgc                                                                                                                                         <  2:6424361/150‑1 (MQ=255)
                tGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAgcgc                                                                                                                                       <  1:785363/150‑1 (MQ=255)
                  ccggccgCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGccc                                                                                                                                     <  2:4223407/150‑1 (MQ=255)
                   cggccgCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGcccc                                                                                                                                    >  2:3706343/1‑150 (MQ=255)
                         cgcAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCACCCAg                                                                                                                              <  2:3170765/150‑1 (MQ=255)
                         cgcAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAg                                                                                                                              <  2:205684/150‑1 (MQ=255)
                           cAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAgct                                                                                                                            >  2:4463719/1‑150 (MQ=255)
                           cAGTCGCAACGTACCGGCCAGCAGTGGCGCACCAAAACCCGTCACGTTAAGGAAGCGCACCCCAACCACGCCACGCACGAACGCTTGCCCATACGCCAGTTAGCCACCCAGCAGCACCACACCACGGTCGAGAAAACGCCCCAACCAgca                                                                                                                            >  2:5770407/1‑149 (MQ=255)
                             gTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAgctgc                                                                                                                          <  2:3126081/150‑1 (MQ=255)
                                gCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCttt                                                                                                                       <  1:5394884/150‑1 (MQ=255)
                                  aaCGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCttttt                                                                                                                     <  2:6657636/150‑1 (MQ=255)
                                  aaCGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCttttt                                                                                                                     <  1:6739671/150‑1 (MQ=255)
                                   aCGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTa                                                                                                                    <  2:5073508/150‑1 (MQ=255)
                                   aCGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTa                                                                                                                    <  2:3641305/150‑1 (MQ=255)
                                   aCGTACCGGCCTGCAGTGGCGCAGCAAGAACCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTa                                                                                                                    <  1:437289/150‑1 (MQ=255)
                                         cGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCa                                                                                                              <  2:2826756/150‑1 (MQ=255)
                                         cGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCa                                                                                                              <  2:5235177/150‑1 (MQ=255)
                                         cGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCa                                                                                                              >  1:7103/1‑150 (MQ=255)
                                           gCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGt                                                                                                            >  1:341988/1‑150 (MQ=255)
                                            ccTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGtt                                                                                                           <  1:2188803/150‑1 (MQ=255)
                                             cTGCAGTGGCGCAGCAAGACCCTTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTc                                                                                                          <  2:3868524/150‑1 (MQ=255)
                                             cTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTc                                                                                                          <  2:6538521/150‑1 (MQ=255)
                                               gCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCaa                                                                                                        <  2:4721060/150‑1 (MQ=255)
                                                cAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAg                                                                                                       >  1:4489981/1‑150 (MQ=255)
                                                   tGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCAc                                                                                                    <  1:2767771/150‑1 (MQ=255)
                                                     gcgcAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCa                                                                                                  >  2:6144943/1‑150 (MQ=255)
                                                      cgcAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAg                                                                                                 <  1:3787009/150‑1 (MQ=255)
                                                      cgcAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAg                                                                                                 <  1:6453349/150‑1 (MQ=255)
                                                       gcagcaAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAgg                                                                                                <  2:1984898/150‑1 (MQ=255)
                                                         agcaAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGt                                                                                              >  1:113935/1‑150 (MQ=255)
                                                          gcaAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGtt                                                                                             <  1:6233291/150‑1 (MQ=255)
                                                          gcaAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGtt                                                                                             <  1:1371255/150‑1 (MQ=255)
                                                            aaGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTtc                                                                                           <  2:819270/150‑1 (MQ=255)
                                                               aCCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTtcgtc                                                                                        <  2:5302661/150‑1 (MQ=255)
                                                                 ccGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGc                                                                                      <  2:1375432/150‑1 (MQ=255)
                                                                  cGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGcc                                                                                     <  2:1666655/150‑1 (MQ=255)
                                                                  cGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGcc                                                                                     >  2:169658/1‑150 (MQ=255)
                                                                  cGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGcc                                                                                     >  1:4570395/1‑150 (MQ=255)
                                                                   gTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCt                                                                                    <  1:4427467/150‑1 (MQ=255)
                                                                      aGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGc                                                                                 <  1:2596652/150‑1 (MQ=255)
                                                                       ggTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCa                                                                                >  2:1144484/1‑150 (MQ=255)
                                                                         ttAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAAc                                                                              >  1:5810620/1‑150 (MQ=255)
                                                                         ttAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAAc                                                                              <  1:3679878/150‑1 (MQ=255)
                                                                            aGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTg                                                                           <  1:2527616/150‑1 (MQ=255)
                                                                             ggAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGc                                                                          >  2:780931/1‑150 (MQ=255)
                                                                              gAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCa                                                                         >  1:5297207/1‑150 (MQ=255)
                                                                               aaGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCaa                                                                        <  2:6339560/150‑1 (MQ=255)
                                                                               aaGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCaa                                                                        <  1:2416089/150‑1 (MQ=255)
                                                                               aaGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCaa                                                                        <  2:5970496/150‑1 (MQ=255)
                                                                                 gcgcACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCACTc                                                                      >  1:4161075/1‑150 (MQ=255)
                                                                                 gcgcACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATc                                                                      <  1:295655/150‑1 (MQ=255)
                                                                                   gcACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAg                                                                    <  2:4790971/150‑1 (MQ=255)
                                                                                         cATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGa                                                              >  1:6172288/1‑150 (MQ=255)
                                                                                         cATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGGTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGa                                                              <  1:4086714/150‑1 (MQ=255)
                                                                                          aTCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGGAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGag                                                             >  2:4695113/1‑150 (MQ=255)
                                                                                          aTCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGag                                                             >  1:1916386/1‑150 (MQ=255)
                                                                                          aTCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGag                                                             >  1:6621279/1‑150 (MQ=255)
                                                                                           tCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGagc                                                            >  2:6693213/1‑150 (MQ=255)
                                                                                           tCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGagc                                                            <  2:2821586/150‑1 (MQ=255)
                                                                                              aCGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGagccag                                                         <  2:1221895/150‑1 (MQ=255)
                                                                                                  cACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGATTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCAt                                                     >  1:4894792/1‑150 (MQ=255)
                                                                                                   aCGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATc                                                    <  1:5117346/150‑1 (MQ=255)
                                                                                                        cGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCa                                               >  2:5500375/1‑150 (MQ=255)
                                                                                                         gAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAg                                              >  2:2271192/1‑150 (MQ=255)
                                                                                                               ttGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGc                                        >  2:3287902/1‑150 (MQ=255)
                                                                                                               ttGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGc                                        >  2:4284915/1‑150 (MQ=255)
                                                                                                               ttGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGc                                        <  1:6085713/150‑1 (MQ=255)
                                                                                                                tGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCa                                       <  1:1182608/150‑1 (MQ=255)
                                                                                                                   cGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGa                                    <  2:150834/150‑1 (MQ=255)
                                                                                                                            tGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCtgctgc                           <  2:2526727/150‑1 (MQ=255)
                                                                                                                            tGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCtgctgc                           <  1:3860828/150‑1 (MQ=255)
                                                                                                                               tCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCAcc                        <  2:2956808/150‑1 (MQ=255)
                                                                                                                                 gccagccaGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCa                                                                                                              <  2:537051/62‑1 (MQ=255)
                                                                                                                                    agccagcAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATc                   <  1:5845097/150‑1 (MQ=255)
                                                                                                                                       cagcagCTCGACCCGAGGGTCGAGAAAGCGCCCCACCCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGcc                <  2:4948027/150‑1 (MQ=255)
                                                                                                                                          tttcTCGACCCTCGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCGATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGaa             >  1:4768886/4‑150 (MQ=255)
                                                                                                                                          tttcTCGACCCTCGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGaa             >  2:5570616/4‑150 (MQ=255)
                                                                                                                                           ttcTCGACCCTCGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAg            >  2:1108605/3‑150 (MQ=255)
                                                                                                                                            tcTCGACCCTCGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGt           >  1:4371663/2‑150 (MQ=255)
                                                                                                                                            tcTCGACCCTCGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGt           >  1:3169054/2‑150 (MQ=255)
                                                                                                                                              tCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGTCg         >  2:2310257/1‑150 (MQ=255)
                                                                                                                                                gACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGTCGTa       <  2:3402069/150‑1 (MQ=255)
                                                                                                                                                 aCCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGTCGTAg      <  2:1137989/150‑1 (MQ=255)
                                                                                                                                                 aCCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGTCGTAg      <  1:394088/150‑1 (MQ=255)
                                                                                                                                                     gAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGTCGTAGGCAt  >  1:2990338/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCCTGCAGCCGGCAATGCCGGCCGCGCAGTCGCAACGTACCGGCCTGCAGTGGCGCAGCAAGACCCGTCAGGTTAAGGAAGCGCACGCCATCGACGCCACGCTCGAACGCTTGCCGATCGGCCTGTTCGCCAGCCAGCAGCTCGACCCGAGGGTCGAGAAAGCGCCCCAACCAGCTGCTTTTTAGCCGCAGTTCAAGCACCAGGGTTTCGTCGCCTTGCAACGTGCAATCAGCCTTGAGCCAGCCATCGTGCAGGCTGGCAGGAACCTGCTGCACCTGATCGCCGAAGTCGTAGGCAT  >  NC_002947/5628246‑5628544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑